FFCP PHASE1:Hg19::chr11:46333979..46333991,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=90993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18856 | |||
|TSSclassifier=strong | |||
|UniProt=Q96BA8 | |||
|association_with_transcript=101bp_to_AK075538_5end | |||
|coexpression_cluster_id=C882 | |||
|description=CAGE_peak_7_at_CREB3L1_5end | |||
|id=chr11:46333979..46333991,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.16e-32!180;CL:0000057!4.06e-19!75;CL:0000183!3.47e-15!59;CL:0000680!3.58e-14!57;CL:0000056!3.58e-14!57;CL:0000355!3.58e-14!57;CL:0000187!3.97e-14!54;CL:0000192!3.34e-13!42;CL:0000514!3.34e-13!42;CL:0000393!2.70e-11!60;CL:0000211!2.70e-11!60;CL:0000144!2.19e-09!625;CL:0002371!4.69e-08!591;CL:0000048!4.78e-08!430;CL:0002620!4.98e-08!23;CL:0000359!5.88e-08!32;CL:0000222!1.08e-07!119;CL:0000723!1.31e-07!436;CL:0000034!1.74e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000192;9.80e-10;43!CL:0002570;1.15e-09;8!CL:0000135;5.49e-08;3!CL:0000388;5.49e-08;3!CL:0002622;6.10e-08;3!CL:0000359;7.59e-08;32!CL:0002620;2.52e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.77e-13,43;CL:0000514,7.77e-13,43;CL:0000057,8.40e-12,76;CL:0000187,3.03e-10,55;CL:0000048,4.47e-10,427;CL:0000723,1.06e-09,433;CL:0002570,1.25e-09,8;CL:0000680,1.82e-09,58;CL:0000056,1.82e-09,58;CL:0000355,1.82e-09,58;CL:0000034,3.22e-09,441;CL:0000393,9.10e-09,61;CL:0000211,9.10e-09,61;CL:0000135,5.09e-08,3;CL:0000388,5.09e-08,3;CL:0000359,6.65e-08,32;CL:0002622,8.88e-08,3;CL:0002620,2.78e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;9.80e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!4.87e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.30e-08;3!DOID:127;5.30e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.74e-08,3;DOID:127,4.74e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!7.68e-14!63;UBERON:0001015!7.68e-14!63;UBERON:0000383!7.68e-14!63;UBERON:0001134!3.95e-13!61;UBERON:0002036!3.95e-13!61;UBERON:0003082!3.95e-13!61;UBERON:0000914!4.62e-13!83;UBERON:0002329!4.62e-13!83;UBERON:0003077!4.62e-13!83;UBERON:0003059!4.62e-13!83;UBERON:0007282!4.62e-13!83;UBERON:0009618!4.62e-13!83;UBERON:0007285!4.62e-13!83;UBERON:0004290!6.94e-13!70;UBERON:0000486!2.99e-11!82;UBERON:0005256!1.44e-10!143;UBERON:0001637!1.69e-07!42;UBERON:0003509!1.69e-07!42;UBERON:0004572!1.69e-07!42;UBERON:0002100!3.72e-07!216;UBERON:0003102!5.50e-07!95;UBERON:0000475!9.85e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.49e-08;3!UBERON:0000043;5.49e-08;3!UBERON:0007845;5.49e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.02e-09,64;UBERON:0001015,4.02e-09,64;UBERON:0000383,4.02e-09,64;UBERON:0001134,1.50e-08,62;UBERON:0002036,1.50e-08,62;UBERON:0003082,1.50e-08,62;UBERON:0007524,1.69e-08,73;UBERON:0007846,5.09e-08,3;UBERON:0000043,5.09e-08,3;UBERON:0007845,5.09e-08,3;UBERON:0002329,7.81e-08,71;UBERON:0003059,7.81e-08,71;UBERON:0007282,7.81e-08,71;UBERON:0004290,7.81e-08,71;UBERON:0009618,7.81e-08,71;UBERON:0003077,1.17e-07,72;UBERON:0007285,1.17e-07,72;UBERON:0007503,1.49e-07,78;UBERON:0000486,8.47e-07,83 | |||
|phase1_expression=0.726713517082227,1.92690471501885,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,1.58260186937072,0.618831764800233,0.331397375727916,0.672325146451775,2.41077811209591,1.46062018077475,0.975865597581014,0.246242116153576,0.204000691244253,1.25381888591235,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.662045904066094,0.860509862246441,2.4826786753885,0,0,2.4666754841716,0,0.404132016209064,0.163461903113459,1.21085942115945,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.826606249406124,2.37600571456411,2.71993622206413,1.82032272387605,2.87447256726495,0.168336113954066,0.250237039743928,0,0,2.45190236639216,0.300476117813194,0.567160915800105,1.79389635688862,1.92201649936711,0.847727604638247,0,1.13357782162283,0.515281080091258,1.48893485065272,1.18143432568886,1.46155507741798,0.504867548488229,0.552299391853796,1.2931684545505,1.06502877754984,1.71278566986988,1.3564847384839,0,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,0,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.614942192715568,0,0,0,0,0.0925884451585296,0.977424915930974,1.03993478527958,0,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.2933531432838,0.129271715757778,0,2.535908257668,0.26593811658487,0,0.771622122786426,0,0.532844358032199,2.28764789853036,5.96883765930587,1.64648067356154,1.30294473717494,0.355391948742546,0.791951872933429,0,0,0.399891964728228,0,0,0,0.958499421966331,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,0.813795071099207,0.623912584592421,7.31558854068363,1.57702415033935,0.585707074963566,0.601892199455438,0,1.03473071292505,0.664225598535437,0.553107505625109,1.12948698808508,0.783204629850962,0.686286847621712,0,0,0,0,1.66435439510497,3.0239029332968,0.496215615637554,0.920771839728375,3.64858122762996,0.384417447767103,0,1.60853921143608,0,0.308419387605311,0.355123450626254,0.410635780069046,0,0.348631135379878,0,0,0,1.14814448164607,2.54927635209404,3.40923478894503,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0.812839312631559,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,2.56394501491362,0.907604499126468,0,1.30012049207304,1.6068392984416,0.386682873168488,0.616194468458578,0,0.275673144969061,0.751941714077915,0.725083469571143,0.170453254832202,1.78064071293475,0,0,0,0,3.71876439437829,3.46293581513704,0,0.616067160352178,0,0,0,0,0,0,0.38126038784765,2.04718233049067,0.42793898803392,0.95460974377781,2.35484592059769,0.359744915166629,1.64722217841633,0.589062011728432,0.202182481573316,0,0.421258456238981,1.95053495635836,3.1682753652067,0,0.409499734223957,3.67654123079653,2.26016233240486,1.10273068709225,1.99031692572366,0.876901770507525,0.578775534266688,1.31178950409327,0,1.8589409885985,0.563391205064483,1.43411352204052,0.88424136911809,1.426684205925,1.06428319221179,1.47775344708365,0.987884678879706,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.20453736500431,0,1.86623752597084,0,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0.108647371922008,0,0.732780747214898,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0.90392296312213,0.274083849293502,0,0,0,0.64127056201227,0.426905989478705,0,0.432271251462318,0,0.171594997861965,0,0,0,0.271808412147228,0.313808538937,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,2.17199840701485,5.18532894720761,1.63293680054705,0,0,1.36310417428337,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,1.34329322598187,1.40227985908335,0,0.757612021100357,0.50313580350515,0.889811221596536,0.915360273587694,1.05861646634267,0.932623203496683,0.443565449968902,0.318593534327405,0.899606224327209,0.621051827505038,1.658824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| |||
|short_description=p7@CREB3L1 | |||
}} |
Revision as of 07:30, 11 January 2014
Short description: | p7@CREB3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_7_at_CREB3L1_5end |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | 101bp_to_AK075538_5end |
EntrezGene: | CREB3L1 |
HGNC: | 18856 |
UniProt: | Q96BA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.77e-13 | 43 |
smooth muscle myoblast | 7.77e-13 | 43 |
fibroblast | 8.40e-12 | 76 |
muscle cell | 3.03e-10 | 55 |
multi fate stem cell | 4.47e-10 | 427 |
somatic stem cell | 1.06e-09 | 433 |
mesenchymal stem cell of adipose | 1.25e-09 | 8 |
muscle precursor cell | 1.82e-09 | 58 |
myoblast | 1.82e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.82e-09 | 58 |
stem cell | 3.22e-09 | 441 |
electrically responsive cell | 9.10e-09 | 61 |
electrically active cell | 9.10e-09 | 61 |
fibrocyte | 5.09e-08 | 3 |
tendon cell | 5.09e-08 | 3 |
vascular associated smooth muscle cell | 6.65e-08 | 32 |
prostate stromal cell | 8.88e-08 | 3 |
skin fibroblast | 2.78e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 4.02e-09 | 64 |
musculature | 4.02e-09 | 64 |
musculature of body | 4.02e-09 | 64 |
skeletal muscle tissue | 1.50e-08 | 62 |
striated muscle tissue | 1.50e-08 | 62 |
myotome | 1.50e-08 | 62 |
dense mesenchyme tissue | 1.69e-08 | 73 |
dense regular connective tissue | 5.09e-08 | 3 |
tendon | 5.09e-08 | 3 |
regular connective tissue | 5.09e-08 | 3 |
somite | 7.81e-08 | 71 |
presomitic mesoderm | 7.81e-08 | 71 |
presumptive segmental plate | 7.81e-08 | 71 |
dermomyotome | 7.81e-08 | 71 |
trunk paraxial mesoderm | 7.81e-08 | 71 |
paraxial mesoderm | 1.17e-07 | 72 |
presumptive paraxial mesoderm | 1.17e-07 | 72 |
epithelial vesicle | 1.49e-07 | 78 |
multilaminar epithelium | 8.47e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.74e-08 | 3 |
leiomyoma | 4.74e-08 | 3 |