FFCP PHASE1:Hg19::chr11:35198243..35198260,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000528455_5end | |||
|coexpression_cluster_id=C620 | |||
|description=CAGE_peak_18_at_CD44_5end | |||
|id=chr11:35198243..35198260,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.69e-19!42;CL:0000860!9.97e-18!45;CL:0000557!1.01e-14!71;CL:0002009!4.50e-14!65;CL:0000839!6.75e-14!70;CL:0002194!6.85e-14!63;CL:0000576!6.85e-14!63;CL:0000040!6.85e-14!63;CL:0000559!6.85e-14!63;CL:0000766!1.21e-13!76;CL:0002371!1.33e-08!591;CL:0000144!2.99e-07!625;CL:0000723!7.05e-07!436;CL:0000048!9.93e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-27;33!CL:0002057;2.47e-27;33!CL:0000473;6.55e-24;39!CL:0000234;6.55e-24;39!CL:0000576;4.40e-15;48!CL:0000766;1.62e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.95e-28,48;CL:0000234,2.95e-28,48;CL:0000860,1.66e-26,42;CL:0002057,1.66e-26,42;CL:0002194,5.96e-23,59;CL:0000576,5.96e-23,59;CL:0000040,5.96e-23,59;CL:0000559,5.96e-23,59;CL:0000839,1.25e-22,66;CL:0000557,4.77e-22,67;CL:0002009,1.08e-21,61;CL:0000766,1.13e-20,72;CL:0000763,1.90e-10,108;CL:0000049,1.90e-10,108;CL:0002031,7.91e-09,120;CL:0002087,1.58e-08,115;CL:0000723,1.73e-08,433;CL:0000048,2.71e-08,427;CL:0000034,9.47e-08,441;CL:0000738,3.42e-07,136;CL:0000134,6.29e-07,354;CL:0000219,7.22e-07,386;CL:0002320,7.53e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.89e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.52e-14!80;UBERON:0002204!1.55e-13!167;UBERON:0001474!1.47e-11!86;UBERON:0002390!2.45e-10!102;UBERON:0003061!2.45e-10!102;UBERON:0004765!5.76e-10!101;UBERON:0001434!5.76e-10!101;UBERON:0002193!7.03e-08!112;UBERON:0003081!8.13e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-19,76;UBERON:0001474,1.17e-17,82;UBERON:0004765,4.55e-16,90;UBERON:0002204,1.10e-15,167;UBERON:0001434,4.30e-15,100;UBERON:0002405,8.56e-14,93;UBERON:0002390,3.52e-13,98;UBERON:0003061,3.52e-13,98;UBERON:0002193,3.65e-11,108;UBERON:0003081,3.60e-10,203;UBERON:0000926,2.26e-08,315;UBERON:0004120,2.26e-08,315;UBERON:0006603,2.26e-08,315;UBERON:0002384,4.26e-07,371;UBERON:0004573,7.02e-07,33;UBERON:0004571,7.02e-07,33 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,1.04474251279935,0.245733936501509,0.697801167972428,0,0.527533956456907,0.866364470720326,1.32558950291166,1.34465029290355,3.61616716814386,0,2.43966399395253,0.492484232307152,1.83600622119828,0.626909442956176,0.286235987131057,1.23186982565596,0.627713197974014,0.0764134057479513,0.0821005894499457,0,0,0.767658796194425,0.928896739896456,0.919421224478927,1.50602959389125,1.47901604066715,0,0,0,1.10799081706375,2.20598892217156,1.51907609501096,0,0.32389366601898,1.28787783817093,4.21654892460738,3.40088349319928,5.82201746850759,6.0431549595478,4.11167888021826,4.33588919253145,4.60307827715441,3.84241059793651,2.83778675866302,1.37898272294647,3.22742341791913,2.70852973188684,7.34145124216158,4.36649840092553,2.02251136000576,6.73384563215986,2.24650318953266,7.03270838378945,2.96866170168044,4.18873681005427,3.40979800426155,6.09439401120026,10.2129340444405,10.5879782329248,6.53246529667532,4.69334626578181,3.25783267057675,4.84319602106695,2.94622108790052,5.69632297393592,1.47878700418359,0.850417199860174,0.209658645508376,0.44931452458598,0.750884464207532,1.28580469357664,0,0.59675003159727,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0.590129310341499,1.57204305099666,1.43921049299656,0.167186495390678,0.651844533267181,0.473447805734733,0,0.779873198196215,0.883817722424512,0.886135578334485,0.541607727530031,0.768547918354051,0.130059347559878,0.822189523018381,0.276350017785848,0.289803085735052,0.296573126324121,1.07016331235885,1.04535523804977,0,0.383220493601921,0.34362744548263,1.26509846009751,0.318565414324097,0,0,0.602300476311091,0.255973222308837,0,0,0,0.403213486449465,1.33720097891754,1.44824403882799,0,0,0,0.722878304769133,2.00535164254356,1.73815822752988,0.795285947051099,2.43317435151318,0,0.221729397462564,0.351339142772504,0.196468613246569,0.728590576585084,1.48313777113772,0,0.522389211897802,1.72845348674525,0,0,0.371457501329565,0,1.72046919021225,0.694281003215189,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0.367663080345869,3.24056779152704,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,1.49091585508596,0.633152558322899,0.264818361626438,2.29469296599051,1.77334191099179,0.560677600142307,0,0,0,0.808264032418128,0.326923806226917,0.151357427644931,0,0.234321431833797,0.936480230490962,0,0.597794722207204,1.17434498643765,0.485618833104395,0.702254033511242,0.204154171254893,0.368502951935304,0.516628905878827,0,0.494533858557114,0,1.43723628363248,0,0.375355559615893,0.277064115484183,0,1.22595118319608,0,0.226864366320042,1.79389635688862,0,0.847727604638247,6.00182192168805,1.8549455262919,1.03056216018252,0.18611685633159,3.20675031258406,1.16924406193438,2.01947019395292,0.736399189138395,2.26304479546337,5.68015348026583,1.10827308050404,0.508681776931463,0.966304265816484,0.818238361772504,1.72082757233402,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0.354920400119532,0.674338760312407,0,0.661763836394364,1.08939722046203,0.71181185733329,0.808987848960987,0.392442930250692,0.38474715694639,0,2.80483547606892,0,0,0,0,0,0,0.245976877086227,0.857839051492628,1.53650399572076,2.24803506515239,0.301586917234893,0.370353780634118,0.325808305310325,2.07986957055916,0,0.463721619900307,0,0.288732895522148,0,0,0,0,0,0.468008530278475,2.0808362720422,0,0.671928512795438,0.283550194484773,0.53735113621709,0.581267877027924,0.383382679165211,0.492663237895943,0.704387472105808,2.69526550203004,1.8735593944205,1.8936365013957,0.63497894292169,0.381988425558278,2.34434894420094,3.4214489204541,1.43958489784653,1.20137223137567,2.28661146104463,0.672786506072164,0,0.36669142910475,0.387815147273333,3.57656445851882,0,1.06375246633948,2.08014873822732,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0,1.3996218765488,3.64871341923571,2.00902836572851,8.43335757932127,0.479249710983165,0,0,0.579125226670317,2.67119219315498,1.25342674267927,0.448340575974109,0.591092280605782,0.646882724578552,0.77005821767849,1.01637849688985,0,0,0.167516265334349,0,0,2.99161459204025,0.828831026872071,0.736148950314839,1.00034104211935,0.542530047399471,2.28767947683888,4.28229573113188,1.10391690523754,0.468565659970853,0,2.27407504055985,0,0.664225598535437,0.737476674166813,1.65078867489357,0,0,0.620304078368662,1.50999940573032,0.74709290462411,0,0,0.30239029332968,0,0.460385919864187,0.841980283299221,0.256278298511402,0.511707249066704,1.44768529029247,1.48418066444991,1.3878872442239,0.177561725313127,0.410635780069046,3.11552657510173,1.97557643381931,0,2.40607764363942,0.552485933615378,1.83703117063371,1.82091168006717,1.96686622439136,0,0.616122696835318,0,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0,0,0,0.09156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| |||
|short_description=p18@CD44 | |||
}} |
Revision as of 07:16, 11 January 2014
Short description: | p18@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_18_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 0bp_to_ENST00000528455_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.95e-28 | 48 |
phagocyte | 2.95e-28 | 48 |
classical monocyte | 1.66e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-26 | 42 |
monopoietic cell | 5.96e-23 | 59 |
monocyte | 5.96e-23 | 59 |
monoblast | 5.96e-23 | 59 |
promonocyte | 5.96e-23 | 59 |
myeloid lineage restricted progenitor cell | 1.25e-22 | 66 |
granulocyte monocyte progenitor cell | 4.77e-22 | 67 |
macrophage dendritic cell progenitor | 1.08e-21 | 61 |
myeloid leukocyte | 1.13e-20 | 72 |
myeloid cell | 1.90e-10 | 108 |
common myeloid progenitor | 1.90e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 7.91e-09 | 120 |
nongranular leukocyte | 1.58e-08 | 115 |
somatic stem cell | 1.73e-08 | 433 |
multi fate stem cell | 2.71e-08 | 427 |
stem cell | 9.47e-08 | 441 |
leukocyte | 3.42e-07 | 136 |
mesenchymal cell | 6.29e-07 | 354 |
motile cell | 7.22e-07 | 386 |
connective tissue cell | 7.53e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-19 | 76 |
bone element | 1.17e-17 | 82 |
skeletal element | 4.55e-16 | 90 |
musculoskeletal system | 1.10e-15 | 167 |
skeletal system | 4.30e-15 | 100 |
immune system | 8.56e-14 | 93 |
hematopoietic system | 3.52e-13 | 98 |
blood island | 3.52e-13 | 98 |
hemolymphoid system | 3.65e-11 | 108 |
lateral plate mesoderm | 3.60e-10 | 203 |
mesoderm | 2.26e-08 | 315 |
mesoderm-derived structure | 2.26e-08 | 315 |
presumptive mesoderm | 2.26e-08 | 315 |
connective tissue | 4.26e-07 | 371 |
systemic artery | 7.02e-07 | 33 |
systemic arterial system | 7.02e-07 | 33 |