FFCP PHASE1:Hg19::chr11:32112663..32112682,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJD5 | |||
|association_with_transcript=0bp_to_ENST00000527835_5end | |||
|description=CAGE_peak_4_at_RCN1_5end | |||
|id=chr11:32112663..32112682,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.50e-23!180;CL:0000057!1.92e-13!75;CL:0000548!5.48e-12!679;CL:0000004!5.48e-12!679;CL:0000255!5.48e-12!679;CL:0000012!6.12e-12!682;CL:0000680!1.39e-09!57;CL:0000056!1.39e-09!57;CL:0000355!1.39e-09!57;CL:0000187!1.86e-09!54;CL:0000393!2.10e-09!60;CL:0000211!2.10e-09!60;CL:0000220!2.31e-09!246;CL:0002321!2.71e-09!248;CL:0000222!6.14e-09!119;CL:0000183!4.99e-08!59;CL:0000192!2.66e-07!42;CL:0000514!2.66e-07!42;CL:0000144!5.67e-07!625;CL:0002620!6.86e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.34e-07;23!CL:0000359;9.68e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.43e-14,76;CL:0000393,5.48e-10,61;CL:0000211,5.48e-10,61;CL:0000680,5.76e-10,58;CL:0000056,5.76e-10,58;CL:0000355,5.76e-10,58;CL:0000187,7.76e-10,55;CL:0000222,4.54e-09,121;CL:0002321,2.11e-08,250;CL:0000192,1.29e-07,43;CL:0000514,1.29e-07,43;CL:0002620,4.78e-07,23;CL:0000359,9.50e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.41e-12!83;UBERON:0002329!7.41e-12!83;UBERON:0003077!7.41e-12!83;UBERON:0003059!7.41e-12!83;UBERON:0007282!7.41e-12!83;UBERON:0009618!7.41e-12!83;UBERON:0007285!7.41e-12!83;UBERON:0004290!8.71e-11!70;UBERON:0002049!7.37e-10!79;UBERON:0007798!7.37e-10!79;UBERON:0001134!1.12e-09!61;UBERON:0002036!1.12e-09!61;UBERON:0003082!1.12e-09!61;UBERON:0000468!1.49e-09!659;UBERON:0002385!3.27e-09!63;UBERON:0001015!3.27e-09!63;UBERON:0000383!3.27e-09!63;UBERON:0000486!4.97e-09!82;UBERON:0004872!4.98e-09!84;UBERON:0000055!5.87e-09!69;UBERON:0000467!9.00e-09!625;UBERON:0000480!1.24e-08!626;UBERON:0005256!3.36e-08!143;UBERON:0001981!7.86e-08!60;UBERON:0007500!7.86e-08!60;UBERON:0004537!7.86e-08!60;UBERON:0006965!7.86e-08!60;UBERON:0003104!1.19e-07!238;UBERON:0009142!1.19e-07!238;UBERON:0000490!1.30e-07!138;UBERON:0002100!2.14e-07!216;UBERON:0003102!2.53e-07!95;UBERON:0001637!4.99e-07!42;UBERON:0003509!4.99e-07!42;UBERON:0004572!4.99e-07!42;UBERON:0000926!5.06e-07!448;UBERON:0004120!5.06e-07!448;UBERON:0006603!5.06e-07!448;UBERON:0003914!8.57e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.30e-11,71;UBERON:0003059,3.30e-11,71;UBERON:0007282,3.30e-11,71;UBERON:0004290,3.30e-11,71;UBERON:0009618,3.30e-11,71;UBERON:0007524,7.75e-11,73;UBERON:0003077,1.16e-10,72;UBERON:0007285,1.16e-10,72;UBERON:0001134,4.59e-10,62;UBERON:0002036,4.59e-10,62;UBERON:0003082,4.59e-10,62;UBERON:0002049,8.61e-10,78;UBERON:0007798,8.61e-10,78;UBERON:0002385,1.58e-09,64;UBERON:0001015,1.58e-09,64;UBERON:0000383,1.58e-09,64;UBERON:0000486,3.62e-09,83;UBERON:0007503,6.57e-09,78;UBERON:0000055,7.39e-09,68;UBERON:0000490,8.04e-09,148;UBERON:0004872,1.07e-08,83;UBERON:0007500,8.05e-08,59;UBERON:0001981,8.05e-08,59;UBERON:0004537,8.05e-08,59;UBERON:0006965,8.05e-08,59;UBERON:0003102,9.98e-08,99;UBERON:0005256,1.40e-07,122;UBERON:0001637,3.21e-07,42;UBERON:0003509,3.21e-07,42;UBERON:0004572,3.21e-07,42;UBERON:0003104,3.42e-07,160;UBERON:0009142,3.42e-07,160;UBERON:0004573,7.73e-07,33;UBERON:0004571,7.73e-07,33;UBERON:0004535,8.41e-07,109;UBERON:0003914,9.62e-07,117 | |||
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| |||
|short_description=p4@RCN1 | |||
}} |
Revision as of 07:06, 11 January 2014
Short description: | p4@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RCN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527835_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | E9PJD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.43e-14 | 76 |
electrically responsive cell | 5.48e-10 | 61 |
electrically active cell | 5.48e-10 | 61 |
muscle precursor cell | 5.76e-10 | 58 |
myoblast | 5.76e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.76e-10 | 58 |
muscle cell | 7.76e-10 | 55 |
mesodermal cell | 4.54e-09 | 121 |
embryonic cell | 2.11e-08 | 250 |
smooth muscle cell | 1.29e-07 | 43 |
smooth muscle myoblast | 1.29e-07 | 43 |
skin fibroblast | 4.78e-07 | 23 |
vascular associated smooth muscle cell | 9.50e-07 | 32 |