FFCP PHASE1:Hg19::chr11:32112533..32112554,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |||
|TSSclassifier=strong | |||
|UniProt=Q15293 | |||
|association_with_transcript=56bp_to_NM_002901,uc010reb.1_5end | |||
|coexpression_cluster_id=C3141 | |||
|description=CAGE_peak_6_at_RCN1_5end | |||
|id=chr11:32112533..32112554,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.41e-31!180;CL:0000222!6.06e-17!119;CL:0000183!4.87e-16!59;CL:0000187!8.46e-16!54;CL:0000680!1.07e-15!57;CL:0000056!1.07e-15!57;CL:0000355!1.07e-15!57;CL:0000393!3.31e-15!60;CL:0000211!3.31e-15!60;CL:0000057!8.63e-14!75;CL:0000192!1.66e-12!42;CL:0000514!1.66e-12!42;CL:0002321!1.13e-11!248;CL:0000220!2.98e-11!246;CL:0000359!5.72e-10!32;CL:0000548!1.28e-08!679;CL:0000004!1.28e-08!679;CL:0000255!1.28e-08!679;CL:0000012!4.11e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.12e-10;32!CL:0000187;2.64e-09;55!CL:0000192;4.81e-09;43!CL:0000723;8.91e-09;61!CL:0000048;2.13e-08;58!CL:0000134;3.99e-08;55!CL:0000393;1.43e-07;61!CL:0000211;1.43e-07;61!CL:0000034;2.61e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.29e-17,121;CL:0000187,6.33e-17,55;CL:0000680,1.38e-16,58;CL:0000056,1.38e-16,58;CL:0000355,1.38e-16,58;CL:0000393,7.58e-16,61;CL:0000211,7.58e-16,61;CL:0000057,4.52e-15,76;CL:0000192,3.95e-13,43;CL:0000514,3.95e-13,43;CL:0002321,9.93e-12,250;CL:0000359,1.27e-10,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.81e-09;43!CL:0000355;4.12e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!6.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.16e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.48e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.77e-17!83;UBERON:0002329!6.77e-17!83;UBERON:0003077!6.77e-17!83;UBERON:0003059!6.77e-17!83;UBERON:0007282!6.77e-17!83;UBERON:0009618!6.77e-17!83;UBERON:0007285!6.77e-17!83;UBERON:0004290!1.77e-16!70;UBERON:0000486!3.46e-15!82;UBERON:0001134!3.59e-14!61;UBERON:0002036!3.59e-14!61;UBERON:0003082!3.59e-14!61;UBERON:0002385!3.08e-13!63;UBERON:0001015!3.08e-13!63;UBERON:0000383!3.08e-13!63;UBERON:0002049!2.47e-12!79;UBERON:0007798!2.47e-12!79;UBERON:0005256!3.17e-11!143;UBERON:0000055!9.20e-09!69;UBERON:0000119!1.15e-08!312;UBERON:0000483!1.43e-08!309;UBERON:0000475!2.21e-08!365;UBERON:0000490!3.97e-08!138;UBERON:0004535!5.13e-08!110;UBERON:0004872!8.34e-08!84;UBERON:0000481!1.75e-07!347;UBERON:0001009!2.31e-07!113;UBERON:0001637!3.57e-07!42;UBERON:0003509!3.57e-07!42;UBERON:0004572!3.57e-07!42;UBERON:0001981!4.67e-07!60;UBERON:0007500!4.67e-07!60;UBERON:0004537!4.67e-07!60;UBERON:0006965!4.67e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.75e-07;31!UBERON:0001015;4.75e-07;31!UBERON:0000383;4.75e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.41e-17,71;UBERON:0003059,1.41e-17,71;UBERON:0007282,1.41e-17,71;UBERON:0004290,1.41e-17,71;UBERON:0009618,1.41e-17,71;UBERON:0007524,1.91e-17,73;UBERON:0003077,6.53e-17,72;UBERON:0007285,6.53e-17,72;UBERON:0007503,1.06e-16,78;UBERON:0000486,7.99e-16,83;UBERON:0001134,4.31e-15,62;UBERON:0002036,4.31e-15,62;UBERON:0003082,4.31e-15,62;UBERON:0002385,8.13e-14,64;UBERON:0001015,8.13e-14,64;UBERON:0000383,8.13e-14,64;UBERON:0002049,1.39e-12,78;UBERON:0007798,1.39e-12,78;UBERON:0005256,7.77e-11,122;UBERON:0000490,4.49e-10,148;UBERON:0003104,8.94e-10,160;UBERON:0009142,8.94e-10,160;UBERON:0000055,8.45e-09,68;UBERON:0004535,1.30e-08,109;UBERON:0000483,1.77e-08,306;UBERON:0000119,1.84e-08,309;UBERON:0001009,6.66e-08,112;UBERON:0004872,1.57e-07,83;UBERON:0001637,2.44e-07,42;UBERON:0003509,2.44e-07,42;UBERON:0004572,2.44e-07,42;UBERON:0007500,5.42e-07,59;UBERON:0001981,5.42e-07,59;UBERON:0004537,5.42e-07,59;UBERON:0006965,5.42e-07,59;UBERON:0004573,7.80e-07,33;UBERON:0004571,7.80e-07,33 | |||
|phase1_expression=1.09007027562334,0.856402095563933,6.06103937612676,5.00366491765652,7.15137751083661,6.10636966870258,2.53299878168311,3.79031924056099,0.783556884599516,1.96587149201207,0.697801167972428,0,1.58260186937072,1.23766352960047,2.31978163009541,8.74022690387308,5.42425075221579,9.49403117503585,12.1983199697627,3.93987385845721,4.08001382488506,5.95563970808367,2.57612388417951,3.01123735160345,1.50651167513763,2.36881557818649,1.55991119954897,2.20390187678302,0,0,0.154816123316076,1.83884244895785,0,0,0,0,1.76160263600908,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0.575384784644301,0.768482119587302,0,0,0,0,0,0,0,0,0.641858054152187,0,0.329851300186716,0.398927315243264,0.426224750532694,0,1.13477044938228,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.633765858935825,0,0.628975936525128,0.112328631146495,0.300353785683013,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0,0,0,1.31692042387539,0.196709770113833,0,0,0.83593247695339,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0.25618263945135,0.520237390239513,0.328875809207352,0.552700035571697,0,0.444859689486181,0.802622484269139,0,0.339928028092699,0,0,0,0.637130828648193,0.651083453856419,0,0,0,0,1.18388626022008,0,0,0,0.289648807765598,0,2.68280343881454,3.45228916977532,2.53007406669196,1.50401373190767,2.89693037921647,0.795285947051099,1.45990461090791,6.14476311566441,8.64744650103999,5.00658278450818,0.982343066232845,1.82147644146271,0.370784442784429,0.324547393654683,1.39303789839414,1.06366368415092,0.715471872916026,1.14398982156026,1.48583000531826,0.993812036833525,2.58070378531837,1.73570250803797,3.95715559346807,0.838998872419812,3.30141650328081,2.50793959844173,4.13466814670926,4.98072767761394,1.33888245105868,2.81980521976403,0.760272105718513,2.19655851793353,4.04429388380456,0,2.76829157680647,2.91888184414021,2.36484109014977,1.53316637465883,1.89853131913626,2.01521918323448,0,0,0.436094052142534,2.48485975847659,2.91250176828533,3.83986624358335,1.72101972449288,2.83734705758686,4.48542080113846,5.33744978648525,2.96001058100592,4.04574346019696,4.04132016209064,1.9615428373615,3.93529311876822,6.33793516927999,5.62371436401112,4.37024107562449,3.99330275081114,2.09228152772521,3.64046945795671,3.88495066483516,3.08991774744947,2.85815839756851,3.68502951935304,3.09977343527296,1.18800285728205,1.7308685049499,3.64064544775211,9.3420358436111,3.36672227908132,4.62938523526267,1.6623846929051,4.38977620880838,3.37136575378922,2.70428506031874,3.40296549480063,2.51145489964407,8.96941033037983,5.08636562782948,3.60109315301283,3.29768093563004,1.28820270022815,6.14185625894246,2.02531598689519,2.92311015483596,1.51460264546469,3.49789614840738,4.36444353410792,7.81021103536552,5.44061330429257,2.7129694769678,1.73934767846967,0,0.860413786167011,3.53723747775827,4.10842281796604,3.02104251460748,3.31715376049185,3.28017106138317,2.91981887260664,3.12899064659632,5.14592750554308,4.14404764057442,1.39310378409594,6.49691533502627,1.53798840051797,1.01150814046861,2.16909926895134,2.20587945464788,1.74303555273925,2.84724742933316,1.75280700608214,1.17732879075208,1.15424147083917,3.69077727312324,0,4.9388881359768,2.94017422771084,0,0,0,0,0.245976877086227,6.00487336044839,0.219500570817251,1.1240175325762,0.603173834469785,2.12953423864618,1.3032332212413,2.07986957055916,8.6598805215164,3.36198174427723,9.7449216215732,3.3204282985047,3.24089858803628,3.61482889245737,0,0,0,0.936017060556951,0.445893486866185,2.81201501960331,1.84780341018745,0.141775097242386,0,0.290633938513962,1.53353071666084,0,0.44024217006613,0,0,0,1.26995788584338,0.763976851116555,0,0,1.02827492703324,1.50171528921959,2.00078502841405,2.24262168690721,0.87192013766656,2.56684000373325,10.2124655448644,14.3062578340753,5.917119267892,4.5209479819428,1.04007436911366,4.62973273671856,2.83698264046557,3.19706614819319,5.7191197463259,3.25572963234866,4.93944202068461,5.21177894869976,3.55391948742546,3.16780749173372,3.01439377059586,8.71533458600294,5.29856853264902,0,0.502257091432126,0,3.11512312139057,2.29723871668228,5.70547620162874,0.723906533337896,3.6985738059069,2.86497541183833,0.448340575974109,0,0,0.513372145118994,3.04913549066956,2.60279707715243,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,1.71768088406796,1.50051156317903,0.813795071099207,3.95144636908534,3.21172179834891,3.15404830067869,6.91134348457008,7.82459859292069,15.9185252839189,0,4.64957918974806,6.0841825618762,4.08352987999989,3.72022199179207,2.74514739048685,0.206768026122887,0,0.320182673410333,0.303127571446259,0,1.20956117331872,1.24053903909388,1.38115775959256,0.841980283299221,5.50998341799514,2.04682899626681,5.95159508231348,1.48418066444991,4.00945203886904,5.85953693533319,2.21743321237285,2.07701771673448,4.41599438147845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| |||
|short_description=p6@RCN1 | |||
}} |
Revision as of 07:06, 11 January 2014
Short description: | p6@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RCN1_5end |
Coexpression cluster: | C3141_small_mesenchymal_putamen_anaplastic_leiomyoma_gall_Smooth |
Association with transcript: | 56bp_to_NM_002901, uc010reb.1_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | Q15293 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.29e-17 | 121 |
muscle cell | 6.33e-17 | 55 |
muscle precursor cell | 1.38e-16 | 58 |
myoblast | 1.38e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-16 | 58 |
electrically responsive cell | 7.58e-16 | 61 |
electrically active cell | 7.58e-16 | 61 |
fibroblast | 4.52e-15 | 76 |
smooth muscle cell | 3.95e-13 | 43 |
smooth muscle myoblast | 3.95e-13 | 43 |
embryonic cell | 9.93e-12 | 250 |
vascular associated smooth muscle cell | 1.27e-10 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.48e-07 | 14 |