FFCP PHASE1:Hg19::chr11:32112459..32112518,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |||
|TSSclassifier=strong | |||
|UniProt=Q15293 | |||
|association_with_transcript=0bp_to_NM_002901,uc010reb.1_5end | |||
|coexpression_cluster_id=C3141 | |||
|description=CAGE_peak_2_at_RCN1_5end | |||
|id=chr11:32112459..32112518,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.16e-40!180;CL:0000680!1.89e-20!57;CL:0000056!1.89e-20!57;CL:0000355!1.89e-20!57;CL:0000187!2.66e-20!54;CL:0000222!3.74e-20!119;CL:0000393!1.15e-19!60;CL:0000211!1.15e-19!60;CL:0000183!1.73e-19!59;CL:0002321!7.28e-17!248;CL:0000220!1.49e-16!246;CL:0000192!1.25e-15!42;CL:0000514!1.25e-15!42;CL:0000057!8.13e-15!75;CL:0000359!1.42e-11!32;CL:0000548!7.23e-09!679;CL:0000004!7.23e-09!679;CL:0000255!7.23e-09!679;CL:0000012!3.73e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000187;6.61e-12;55!CL:0000192;1.05e-11;43!CL:0000359;5.73e-11;32!CL:0000393;5.75e-11;61!CL:0000211;5.75e-11;61!CL:0000134;2.08e-07;55!CL:0000723;3.35e-07;61!CL:0000048;4.00e-07;58!CL:0000499;4.45e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.65e-21,58;CL:0000056,4.65e-21,58;CL:0000355,4.65e-21,58;CL:0000187,6.54e-21,55;CL:0000222,1.04e-20,121;CL:0000393,2.92e-20,61;CL:0000211,2.92e-20,61;CL:0002321,3.47e-17,250;CL:0000192,3.37e-16,43;CL:0000514,3.37e-16,43;CL:0000057,2.16e-15,76;CL:0000359,1.24e-11,32;CL:0000499,3.98e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;1.05e-11;43!CL:0000355;2.28e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!8.12e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.35e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.45e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.00e-21!83;UBERON:0002329!2.00e-21!83;UBERON:0003077!2.00e-21!83;UBERON:0003059!2.00e-21!83;UBERON:0007282!2.00e-21!83;UBERON:0009618!2.00e-21!83;UBERON:0007285!2.00e-21!83;UBERON:0004290!5.29e-21!70;UBERON:0000486!7.51e-20!82;UBERON:0001134!5.92e-19!61;UBERON:0002036!5.92e-19!61;UBERON:0003082!5.92e-19!61;UBERON:0002385!9.66e-18!63;UBERON:0001015!9.66e-18!63;UBERON:0000383!9.66e-18!63;UBERON:0005256!1.87e-16!143;UBERON:0002049!2.52e-15!79;UBERON:0007798!2.52e-15!79;UBERON:0000475!9.98e-15!365;UBERON:0000490!1.28e-14!138;UBERON:0002100!2.06e-14!216;UBERON:0000481!2.91e-13!347;UBERON:0000119!4.46e-13!312;UBERON:0000483!8.28e-13!309;UBERON:0004872!4.80e-12!84;UBERON:0000055!1.32e-11!69;UBERON:0001637!6.37e-11!42;UBERON:0003509!6.37e-11!42;UBERON:0004572!6.37e-11!42;UBERON:0001981!8.37e-11!60;UBERON:0007500!8.37e-11!60;UBERON:0004537!8.37e-11!60;UBERON:0006965!8.37e-11!60;UBERON:0003104!1.29e-10!238;UBERON:0009142!1.29e-10!238;UBERON:0000468!4.37e-10!659;UBERON:0003914!1.42e-09!118;UBERON:0004535!2.41e-09!110;UBERON:0004573!4.32e-09!33;UBERON:0004571!4.32e-09!33;UBERON:0000477!7.39e-09!286;UBERON:0001009!7.89e-09!113;UBERON:0000922!6.31e-07!612;UBERON:0000467!7.32e-07!625;UBERON:0000480!9.16e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.45e-08;33!UBERON:0004571;1.45e-08;33!UBERON:0002385;9.34e-08;31!UBERON:0001015;9.34e-08;31!UBERON:0000383;9.34e-08;31!UBERON:0001637;1.50e-07;42!UBERON:0003509;1.50e-07;42!UBERON:0004572;1.50e-07;42!UBERON:0002049;6.61e-07;75!UBERON:0007798;6.61e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.32e-21,71;UBERON:0003059,1.32e-21,71;UBERON:0007282,1.32e-21,71;UBERON:0004290,1.32e-21,71;UBERON:0009618,1.32e-21,71;UBERON:0007524,2.80e-21,73;UBERON:0003077,5.43e-21,72;UBERON:0007285,5.43e-21,72;UBERON:0000486,1.98e-20,83;UBERON:0007503,5.38e-20,78;UBERON:0001134,1.53e-19,62;UBERON:0002036,1.53e-19,62;UBERON:0003082,1.53e-19,62;UBERON:0002385,2.60e-18,64;UBERON:0001015,2.60e-18,64;UBERON:0000383,2.60e-18,64;UBERON:0003104,1.58e-17,160;UBERON:0009142,1.58e-17,160;UBERON:0000490,5.58e-17,148;UBERON:0005256,2.94e-16,122;UBERON:0002049,5.44e-15,78;UBERON:0007798,5.44e-15,78;UBERON:0000119,2.83e-13,309;UBERON:0000483,5.29e-13,306;UBERON:0002100,6.85e-13,199;UBERON:0004872,1.15e-11,83;UBERON:0000055,2.80e-11,68;UBERON:0001637,5.60e-11,42;UBERON:0003509,5.60e-11,42;UBERON:0004572,5.60e-11,42;UBERON:0007500,1.82e-10,59;UBERON:0001981,1.82e-10,59;UBERON:0004537,1.82e-10,59;UBERON:0006965,1.82e-10,59;UBERON:0004535,1.99e-09,109;UBERON:0003914,3.43e-09,117;UBERON:0004573,3.90e-09,33;UBERON:0004571,3.90e-09,33;UBERON:0001009,7.77e-09,112 | |||
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| |||
|short_description=p2@RCN1 | |||
}} |
Revision as of 07:06, 11 January 2014
Short description: | p2@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RCN1_5end |
Coexpression cluster: | C3141_small_mesenchymal_putamen_anaplastic_leiomyoma_gall_Smooth |
Association with transcript: | 0bp_to_NM_002901, uc010reb.1_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | Q15293 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.65e-21 | 58 |
myoblast | 4.65e-21 | 58 |
multi-potent skeletal muscle stem cell | 4.65e-21 | 58 |
muscle cell | 6.54e-21 | 55 |
mesodermal cell | 1.04e-20 | 121 |
electrically responsive cell | 2.92e-20 | 61 |
electrically active cell | 2.92e-20 | 61 |
embryonic cell | 3.47e-17 | 250 |
smooth muscle cell | 3.37e-16 | 43 |
smooth muscle myoblast | 3.37e-16 | 43 |
fibroblast | 2.16e-15 | 76 |
vascular associated smooth muscle cell | 1.24e-11 | 32 |
stromal cell | 3.98e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.45e-08 | 14 |