FFCP PHASE1:Hg19::chr11:8680082..8680102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr11:8680082..8680102,- | |||
|id=chr11:8680082..8680102,- | |||
|ontology_enrichment_celltype=CL:0002579!7.14e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.70e-43;5!CL:0002579;1.94e-18;3!CL:0002321;9.31e-15;15!CL:0002334;1.91e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.32e-18,3;CL:0002334,2.18e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!5.02e-14!10;DOID:3095!3.62e-10!22;DOID:2994!3.62e-10!22;DOID:169!4.59e-10!6 | |||
|ontology_enrichment_disease_v019=DOID:171;1.01e-47;10!DOID:169;2.49e-36;6!DOID:3095;1.27e-21;22!DOID:2994;1.27e-21;22!DOID:3193;4.85e-08;2!DOID:962;4.85e-08;2!DOID:154;7.03e-08;2!DOID:4236;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.40e-47,10;DOID:169,2.73e-36,6;DOID:3095,1.47e-21,22;DOID:2994,1.47e-21,22;DOID:3193,5.02e-08,2;DOID:962,5.02e-08,2;DOID:154,5.37e-08,2;DOID:4236,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.27e-32!94;UBERON:0001016!9.27e-32!94;UBERON:0001049!1.12e-27!57;UBERON:0005068!1.12e-27!57;UBERON:0006241!1.12e-27!57;UBERON:0007135!1.12e-27!57;UBERON:0001017!4.93e-25!82;UBERON:0005743!6.15e-25!86;UBERON:0000955!1.58e-24!69;UBERON:0006238!1.58e-24!69;UBERON:0002616!1.67e-24!59;UBERON:0002780!2.16e-22!41;UBERON:0001890!2.16e-22!41;UBERON:0006240!2.16e-22!41;UBERON:0003080!1.04e-21!42;UBERON:0002346!7.40e-21!90;UBERON:0001893!6.41e-19!34;UBERON:0001869!1.84e-18!32;UBERON:0007023!2.61e-18!115;UBERON:0003075!7.42e-18!86;UBERON:0007284!7.42e-18!86;UBERON:0002791!1.96e-17!33;UBERON:0002020!7.20e-17!34;UBERON:0003528!7.20e-17!34;UBERON:0000924!1.48e-14!173;UBERON:0006601!1.48e-14!173;UBERON:0003056!2.66e-14!61;UBERON:0004121!1.84e-12!169;UBERON:0000013!3.37e-12!5;UBERON:0002410!3.37e-12!5;UBERON:0000033!1.38e-11!123;UBERON:0000153!1.78e-11!129;UBERON:0007811!1.78e-11!129;UBERON:0009663!6.54e-11!7;UBERON:0002308!6.78e-11!9;UBERON:0000125!6.78e-11!9;UBERON:0002619!1.53e-10!22;UBERON:0001950!5.81e-10!20;UBERON:0000369!2.20e-09!4;UBERON:0002435!2.20e-09!4;UBERON:0000204!2.20e-09!4;UBERON:0010082!2.20e-09!4;UBERON:0000010!3.93e-09!8;UBERON:0000956!5.34e-09!25;UBERON:0000203!5.34e-09!25;UBERON:0002420!2.72e-08!9;UBERON:0007245!2.72e-08!9;UBERON:0010009!2.72e-08!9;UBERON:0010011!2.72e-08!9;UBERON:0000454!2.72e-08!9;UBERON:0005383!1.51e-07!3;UBERON:0005382!1.51e-07!3;UBERON:0003076!3.57e-07!15;UBERON:0003057!3.57e-07!15;UBERON:0004733!4.42e-07!12;UBERON:0002028!4.42e-07!12;UBERON:0007277!4.42e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.70e-43;5!UBERON:0002410;1.70e-43;5!UBERON:0000010;2.29e-24;8!UBERON:0003688;2.95e-20;6!UBERON:0002358;2.95e-20;6!UBERON:0003684;2.95e-20;6!UBERON:0001178;2.95e-20;6!UBERON:0002346;4.40e-14;4!UBERON:0000923;4.40e-14;4!UBERON:0010316;4.40e-14;4!UBERON:0005291;4.40e-14;4!UBERON:0004457;1.00e-13;9!UBERON:0000042;1.00e-13;9!UBERON:0002050;1.85e-11;5!UBERON:0005423;1.85e-11;5!UBERON:0003714;4.85e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.90e-43,5;UBERON:0002410,1.90e-43,5;UBERON:0000010,2.44e-24,8;UBERON:0003688,3.16e-20,6;UBERON:0002358,3.16e-20,6;UBERON:0003684,3.16e-20,6;UBERON:0001178,3.16e-20,6;UBERON:0004457,1.98e-10,12;UBERON:0000042,1.98e-10,12;UBERON:0003714,5.02e-08,2 | |||
|phase1_expression=0.181678379270557,0,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,1.07423381301644,0,1.15325234330131,1.02341449813341,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0,0,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,1.90987494426621,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.91124334987037,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0.553394539744923,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,23.148881205961,0.215649622793364,4.4034463719651,3.49470842214445,0,1.06287460050841,1.11542187833102,2.23457967189298,0.636008701306837,1.10406443001755,0,0,0,0.321146125482298,0,0,0.41023272848151,0.252071696221718,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.214429632529969,0,0,2.95559062914385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81155412280008,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0.101988829741982,0.801652215796681,0,0.250707539292375,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr11:8680082..8680102,- | |||
}} |
Revision as of 06:27, 11 January 2014
Short description: | p@chr11:8680082..8680102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:8680082..8680102, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.32e-18 | 3 |
preadipocyte | 2.18e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.90e-43 | 5 |
autonomic nervous system | 1.90e-43 | 5 |
peripheral nervous system | 2.44e-24 | 8 |
omentum | 3.16e-20 | 6 |
peritoneum | 3.16e-20 | 6 |
abdominal cavity | 3.16e-20 | 6 |
visceral peritoneum | 3.16e-20 | 6 |
cavity lining | 1.98e-10 | 12 |
serous membrane | 1.98e-10 | 12 |
neural tissue | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.40e-47 | 10 |
neuroendocrine tumor | 2.73e-36 | 6 |
germ cell and embryonal cancer | 1.47e-21 | 22 |
germ cell cancer | 1.47e-21 | 22 |
peripheral nerve sheath neoplasm | 5.02e-08 | 2 |
neurofibroma | 5.02e-08 | 2 |
mixed cell type cancer | 5.37e-08 | 2 |
carcinosarcoma | 5.37e-08 | 2 |