FFCP PHASE1:Hg19::chr10:135122346..135122393,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18599 | |||
|TSSclassifier=strong | |||
|UniProt=F5H4E0 | |||
|association_with_transcript=0bp_to_ENST00000417178,ENST00000480198,ENST00000487796_5end | |||
|description=CAGE_peak_1_at_TUBGCP2_5end | |||
|id=chr10:135122346..135122393,- | |||
|ontology_enrichment_celltype=CL:0000055!4.82e-10!180;CL:0000057!1.19e-07!75;CL:0000183!1.76e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.18e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!7.19e-10!312;UBERON:0000483!2.08e-09!309;UBERON:0000914!4.11e-09!83;UBERON:0002329!4.11e-09!83;UBERON:0003077!4.11e-09!83;UBERON:0003059!4.11e-09!83;UBERON:0007282!4.11e-09!83;UBERON:0009618!4.11e-09!83;UBERON:0007285!4.11e-09!83;UBERON:0000025!8.61e-09!194;UBERON:0004290!3.23e-08!70;UBERON:0000481!4.41e-08!347;UBERON:0000475!1.49e-07!365;UBERON:0001637!1.92e-07!42;UBERON:0003509!1.92e-07!42;UBERON:0004572!1.92e-07!42;UBERON:0000486!3.30e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.33e-10,309;UBERON:0000483,1.55e-09,306;UBERON:0007503,2.11e-09,78;UBERON:0010314,3.22e-09,132;UBERON:0000025,4.05e-09,192;UBERON:0007524,4.63e-08,73;UBERON:0003077,5.65e-08,72;UBERON:0007285,5.65e-08,72;UBERON:0002329,1.11e-07,71;UBERON:0003059,1.11e-07,71;UBERON:0007282,1.11e-07,71;UBERON:0004290,1.11e-07,71;UBERON:0009618,1.11e-07,71;UBERON:0001637,1.92e-07,42;UBERON:0003509,1.92e-07,42;UBERON:0004572,1.92e-07,42;UBERON:0000479,4.53e-07,773;UBERON:0000486,9.30e-07,83 | |||
|phase1_expression=13.8075568245623,18.8408461024065,11.1353979235817,26.0190575718139,25.4767823823554,33.148863915814,15.1979926900986,20.8467558230854,24.290263422585,29.9795402531841,112.345988043561,31.673998958875,30.5969694745006,24.8770369449694,31.8141480698799,21.5144046864568,22.9023920649111,21.1789926212338,24.8845727383159,50.1102706372527,68.9522336405575,49.2123912720598,20.036519099174,22.1736568618072,24.3552720813917,15.741161584078,15.4349108165898,16.6079748571863,21.6350352266897,19.9591287010551,24.9253958538882,52.4070097952988,53.3134476237503,68.0347378706889,13.7891617032937,15.9229540385912,15.2672228454121,34.9017107375083,32.488200490163,40.3640219531484,17.4654069907141,18.1380452970629,20.6060454107349,21.5189393393756,20.7831769028845,19.4067248950253,22.5456165798514,17.6802191849385,14.2464930611748,19.5630826779062,15.6258030982751,15.6078271726466,20.6847408441971,18.0735711403471,23.0225027210381,22.7773230846552,21.0137735544541,11.4608977066993,20.8137046812214,13.1580901101198,15.983428144976,18.4716728104561,18.5501201588118,17.0489900213078,22.6363206130296,17.5889419654253,14.9477339758938,15.0749199154046,18.7733850631273,9.33912032232002,13.9241885605675,13.2579948955523,9.17740923578565,21.5480392038181,12.9688622978677,19.7079126777873,21.0054540243946,18.7721116051883,17.1976377765876,19.3808665744049,16.9079175619227,18.8144078377573,19.3595868907455,15.8380197266018,15.1216573156804,16.2157484575273,15.2150475073685,14.9435634388166,12.5598525829124,12.4026988089597,22.7685187643779,20.5533016279829,21.0250275468876,26.4342657158052,25.2228853341691,16.5931973408299,16.9170402297896,22.4016134767024,22.204961891947,17.3873955206305,18.9034914647482,18.4644644236546,17.534405556712,15.5974639639243,15.6141130961664,13.9566353587681,24.3723477388514,16.1395062854351,17.9481899632632,20.7191759800632,19.0681512272235,14.2003512010176,21.6498382216608,20.6006437629079,29.2699466653935,16.4298546911471,14.562378756873,17.5249997196141,22.0127132056967,18.7953594451217,20.183587069549,17.1081368000707,23.7908688142881,28.157054453972,12.4930726552346,19.1789574155654,16.4225599384209,17.1365731741023,18.988253900629,22.4477826018338,4.87613732627923,16.0968206328873,16.4942704778154,24.9393015145351,22.560205978615,16.9470427184164,26.2444362526863,23.8451086448292,20.4195205074387,24.6119631183446,23.1005486372921,27.7675640055151,48.8155686312007,37.4492287212274,20.446485800245,17.4129737299267,23.9324328933957,17.40981557429,20.5918167880846,27.8593125997174,22.6589144398044,31.8286800189266,28.8126616334303,25.4388573865804,32.7209560243727,24.2103876907259,22.5714563859755,16.2802558276677,17.4325468716488,18.0749130892922,37.4631264911507,11.4040815857777,24.1621436972688,23.1627740617897,21.0636906449257,15.627452449714,17.2887616922151,17.6800024358816,27.596994743859,26.5794384679076,18.8697796248319,25.038279312852,23.2668158488995,27.0378312328371,24.3516256330706,17.6016411213766,20.6558322068621,26.3889691088909,26.2454602826784,33.0799784083961,29.8897188043174,28.1201005195562,20.8511393717843,25.9991597094498,30.0769901728764,41.6232926023561,19.58998143232,52.2536792989366,29.6552072988804,31.3759501849447,24.2106862493918,38.5185155551549,36.0976665940933,37.0790129693936,26.9483506056459,27.023549808589,25.0048390445352,19.0080457165129,25.4684937156914,51.8791976304675,66.1128690470939,25.418753207064,32.4056966468387,21.8880651232505,36.4351425331095,27.8903894177108,20.4323760112972,17.5819883898033,34.2634204165726,20.0743945489453,18.2261434997223,34.8105671457907,31.224916359247,52.0433890892171,28.6619958750648,24.1350155105011,31.861900687712,38.8748012335936,17.3974308433946,22.307155840996,24.850671476163,38.084293130048,29.6731036543353,15.8473899593903,19.3649745619493,26.3860227757884,14.8807921478106,15.9035721985782,16.0347641159935,19.0736341228282,11.6067591402789,11.3142981313507,32.8544017892614,30.8755650332585,44.2031748327938,13.0023019848954,20.2126254867484,23.6613600079688,17.8699771482788,19.7629044504455,20.5146789282253,23.3131005178875,19.2189201479988,19.5505396832238,19.2297035822839,21.5458407889979,47.2419490959775,51.889456307275,34.983790963169,58.8034845542168,15.2106041786197,12.7767538168091,22.4500164538934,16.3341346783421,20.7850461137862,24.8773324932862,20.3038028005957,49.4567714333526,11.2592449101027,18.702865922023,60.2745364824101,68.6356958284522,24.5363281442965,21.6789857303394,14.9109041679494,11.693682268647,17.1304639653346,13.3177906564219,25.2865407346968,28.3300433491308,17.2351904261178,27.3784990212908,23.1864613170416,14.0600750980165,19.4859268710677,23.8182163367209,21.6731624940893,30.80719748248,42.5554773873384,7.8826118063351,19.8989460869891,53.2833256939784,64.2774992239648,44.0586092658066,27.81207769997,35.5249235769198,42.1982809956169,37.6359381249951,19.5372236136315,16.5188681814155,19.7220238515099,48.4406284371958,35.748725644329,19.7279988858356,12.5393564285044,32.18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| |||
|short_description=p1@TUBGCP2 | |||
}} |
Revision as of 05:43, 11 January 2014
Short description: | p1@TUBGCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBGCP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417178, ENST00000480198, ENST00000487796_5end |
EntrezGene: | TUBGCP2 |
HGNC: | 18599 |
UniProt: | F5H4E0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.18e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cell layer | 5.33e-10 | 309 |
epithelium | 1.55e-09 | 306 |
epithelial vesicle | 2.11e-09 | 78 |
structure with developmental contribution from neural crest | 3.22e-09 | 132 |
tube | 4.05e-09 | 192 |
dense mesenchyme tissue | 4.63e-08 | 73 |
paraxial mesoderm | 5.65e-08 | 72 |
presumptive paraxial mesoderm | 5.65e-08 | 72 |
somite | 1.11e-07 | 71 |
presomitic mesoderm | 1.11e-07 | 71 |
presumptive segmental plate | 1.11e-07 | 71 |
dermomyotome | 1.11e-07 | 71 |
trunk paraxial mesoderm | 1.11e-07 | 71 |
artery | 1.92e-07 | 42 |
arterial blood vessel | 1.92e-07 | 42 |
arterial system | 1.92e-07 | 42 |
tissue | 4.53e-07 | 773 |
multilaminar epithelium | 9.30e-07 | 83 |