FFCP PHASE1:Hg19::chr10:129845809..129845820,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |||
|TSSclassifier=strong | |||
|UniProt=P23469 | |||
|association_with_transcript=0bp_to_NM_130435,uc001lkd.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_PTPRE_5end | |||
|id=chr10:129845809..129845820,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.36e-58!140;CL:0000037!2.83e-57!172;CL:0000566!2.83e-57!172;CL:0000988!1.17e-53!182;CL:0002032!4.23e-52!165;CL:0000837!4.23e-52!165;CL:0002087!7.59e-49!119;CL:0002031!1.02e-47!124;CL:0000766!3.85e-39!76;CL:0000763!5.20e-36!112;CL:0000049!5.20e-36!112;CL:0000557!1.24e-34!71;CL:0002009!1.68e-34!65;CL:0002194!3.36e-33!63;CL:0000576!3.36e-33!63;CL:0000040!3.36e-33!63;CL:0000559!3.36e-33!63;CL:0000839!1.50e-32!70;CL:0002057!2.30e-31!42;CL:0000860!1.08e-27!45;CL:0000542!8.26e-14!53;CL:0000051!8.26e-14!53;CL:0000838!1.38e-13!52;CL:0000134!1.24e-09!358;CL:0000084!4.30e-09!25;CL:0000827!4.30e-09!25;CL:0002320!4.33e-09!365;CL:0000094!5.28e-08!8;CL:0000791!6.97e-08!18;CL:0000789!6.97e-08!18;CL:0002420!6.97e-08!18;CL:0002419!6.97e-08!18;CL:0000790!6.97e-08!18;CL:0002393!8.61e-07!9;CL:0002397!8.61e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-41;33!CL:0002057;2.17e-41;33!CL:0000473;4.94e-40;39!CL:0000234;4.94e-40;39!CL:0000576;1.14e-32;48!CL:0000766;9.14e-28;69!CL:0000738;7.24e-17;136!CL:0002087;1.41e-16;104!CL:0000763;8.36e-16;100!CL:0000094;4.12e-13;8!CL:0000988;1.41e-11;177!CL:0000791;9.80e-11;18!CL:0000789;9.80e-11;18!CL:0002419;9.80e-11;18!CL:0000084;3.75e-10;25!CL:0000625;5.16e-10;11!CL:0000840;5.61e-09;5!CL:0000081;6.27e-09;11!CL:0002393;7.32e-09;6!CL:0002397;7.32e-09;6!CL:0000219;4.81e-08;193!CL:0000451;5.12e-08;10!CL:0000235;6.42e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.66e-78,136;CL:0000037,8.66e-73,168;CL:0000766,1.60e-70,72;CL:0000988,2.10e-67,177;CL:0002032,1.60e-64,161;CL:0000837,1.60e-64,161;CL:0002087,1.68e-63,115;CL:0002009,6.82e-63,61;CL:0000557,2.84e-62,67;CL:0002031,5.22e-61,120;CL:0002194,1.56e-60,59;CL:0000576,1.56e-60,59;CL:0000040,1.56e-60,59;CL:0000559,1.56e-60,59;CL:0000473,6.38e-60,48;CL:0000234,6.38e-60,48;CL:0000763,3.39e-57,108;CL:0000049,3.39e-57,108;CL:0000839,3.71e-56,66;CL:0000860,2.79e-53,42;CL:0002057,2.79e-53,42;CL:0000134,1.18e-19,354;CL:0002320,1.11e-18,361;CL:0000219,2.74e-15,386;CL:0000094,4.09e-13,8;CL:0000034,6.87e-12,441;CL:0000723,1.37e-11,433;CL:0000048,2.95e-11,427;CL:0000791,4.57e-11,18;CL:0000789,4.57e-11,18;CL:0002420,4.57e-11,18;CL:0002419,4.57e-11,18;CL:0000790,4.57e-11,18;CL:0000084,2.19e-10,25;CL:0000827,2.19e-10,25;CL:0000625,2.81e-10,11;CL:0002393,2.65e-09,9;CL:0002397,2.65e-09,9;CL:0000840,6.12e-09,5;CL:0001029,6.12e-09,5;CL:0000081,6.24e-09,11;CL:0000838,6.64e-09,52;CL:0000542,1.30e-08,53;CL:0000051,1.30e-08,53;CL:0000451,5.39e-08,10;CL:0000235,7.61e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.24e-39;42!CL:0000049;2.36e-15;108!CL:0000790;9.80e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.66e-41!102;UBERON:0003061!3.66e-41!102;UBERON:0002193!1.29e-35!112;UBERON:0002371!1.81e-31!80;UBERON:0001474!5.50e-27!86;UBERON:0004765!1.64e-20!101;UBERON:0001434!1.64e-20!101;UBERON:0002405!2.88e-20!115;UBERON:0003081!1.13e-08!216;UBERON:0002384!3.22e-08!375;UBERON:0000178!1.24e-07!15;UBERON:0000179!1.24e-07!15;UBERON:0000463!1.24e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.69e-11;15!UBERON:0000179;3.69e-11;15!UBERON:0000463;3.69e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.94e-65,98;UBERON:0003061,9.94e-65,98;UBERON:0002193,2.09e-56,108;UBERON:0002371,2.17e-54,76;UBERON:0001474,6.71e-49,82;UBERON:0002405,2.12e-45,93;UBERON:0004765,9.93e-43,90;UBERON:0001434,1.99e-36,100;UBERON:0003081,2.55e-20,203;UBERON:0002384,2.33e-17,371;UBERON:0002204,2.89e-14,167;UBERON:0000178,3.02e-11,15;UBERON:0000179,3.02e-11,15;UBERON:0000463,3.02e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,1.47781061009902,0.865818594450472,11.0141997517693,10.747223146722,8.51488678238418,0.919421224478927,0.6024118375565,1.10926203050036,1.16200800870452,0.142169232487422,1.76160263600908,19.3898392986157,13.2359335330294,13.4546739843828,1.11957737119962,2.59114932815184,1.03030227053675,3.92575244704825,6.80176698639857,5.33684934613196,10.2268776238501,9.45686142450199,13.3173739484895,14.0969272237854,11.7833925003386,13.0065226438722,24.4769433322999,19.3645405075148,16.251178391321,6.02375486536335,5.45812300115692,6.06753408001728,12.2433556948361,14.7627352455003,14.0654167675789,5.27762080298746,8.37747362010854,3.83602275479425,8.70627715885752,12.4824749432051,6.22822248995575,8.03995728821578,7.30076085788282,14.1172749058326,5.44859552370032,11.4166067156145,9.49387162322653,4.01385043992689,1.91343869968539,3.35453832813401,6.29040334420373,6.75796017786778,7.23265140136861,3.13514018115373,0.59675003159727,1.27864907635244,0,1.63841583378639,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,8.96813700770458,1.58030450865046,2.9506465517075,0.786021525498329,0,2.00623794468814,1.30368906653436,1.89379122293893,1.94826728407911,1.89397776704795,2.94605907474837,1.32920336750173,2.70803863765016,2.17755243533648,3.51160238411671,2.13769275984779,0.829050053357545,1.73881851441031,1.33457906845854,0.802622484269139,3.1360657141493,1.81294948316106,2.68254345521345,0.34362744548263,2.02415753615602,3.18565414324097,3.90650072313851,1.90090408889675,2.71035214339991,2.17577238962511,0,1.89421801635213,4.92676798152628,2.01606743224732,2.94184215361858,2.46201486600758,0,0,0,0,0,0.434539556882471,2.3858578411533,0,0,0,0,0.196468613246569,0.364295288292542,0.370784442784429,6.16640047943898,8.18409765306556,7.71156171009418,10.9705687180457,10.8679033048224,18.5728750664782,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,42.1697335795402,112.456276603014,1.3082821564276,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0.171567810298526,0.98775256867763,0,1.3068766413512,1.20364978706088,0,0,0,0,0,0,0,0,0,0,2.46217006087397,3.27605971194933,3.41851673264075,0,0.16798212819886,0.992425680696705,1.07470227243418,2.03443756959773,1.15014803749563,0,0,1.65862492432618,0.720599767084807,1.51490920111656,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0,2.43247561282381,2.00902836572851,6.32501818449095,0.479249710983165,0,0,0,0,0,0.672510863961164,4.53170748464433,3.45004119775228,3.20857590699371,0,0,0,0,0,25.4662388142042,14.9580729602012,31.9099945345747,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,6.40980880980951,3.66714141391649,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.460404944679482,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0.255679882248303,0,0.661139661443912,0.384380134730212,2.80747967488085,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.865999014529609,0,0,0.470719003883896,0.86101074534246,0,0.443430153536676,0,3.55213326462519,4.58782324285425,3.41788312304498,2.38231775457789,3.29089818468955,2.59389324477087,4.32025149790492,3.96562588147135,0,0,0.245040215981032,0.557409525377156,0.28853842595289,0.782560276832555,1.4348364545594,0,2.68107518185313,1.69338866179106,2.27235358192189,0.280797178113459,2.05411211129873,1.88015874927628,0,0.677167111206413,0.642352300414798,0,1.27753871307098,0.687010689511529,0.614481528616916,0,0.834245708559542,0.586164286206121,0,1.23087398947712,0,0.33307196799782,0,0,0.879049075631364,0,1.00299045849731,0,1.19372242368845,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0.659215496907038,0,0.597743964753209,1.38141957765574,0,0,0.369254416383208,0,0.0898683511473268,0,1.02314474045374,0.591860433821602,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0.697118721393016,0.615602068030377,0,1.38338342632836,0.987334088507493,0,0.957003479195758,0.274792780205587,1.06606955203727,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0,0,0,0.547364367646998,0,0,0,2.41981432097328,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| |||
|short_description=p7@PTPRE | |||
}} |
Revision as of 05:35, 11 January 2014
Short description: | p7@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTPRE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_NM_130435, uc001lkd.2_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | P23469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.94e-65 | 98 |
blood island | 9.94e-65 | 98 |
hemolymphoid system | 2.09e-56 | 108 |
bone marrow | 2.17e-54 | 76 |
bone element | 6.71e-49 | 82 |
immune system | 2.12e-45 | 93 |
skeletal element | 9.93e-43 | 90 |
skeletal system | 1.99e-36 | 100 |
lateral plate mesoderm | 2.55e-20 | 203 |
connective tissue | 2.33e-17 | 371 |
musculoskeletal system | 2.89e-14 | 167 |
blood | 3.02e-11 | 15 |
haemolymphatic fluid | 3.02e-11 | 15 |
organism substance | 3.02e-11 | 15 |