FFCP PHASE1:Hg19::chr10:128111291..128111299,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr10:128111291..128111299,- | |||
|id=chr10:128111291..128111299,- | |||
|ontology_enrichment_celltype=CL:0002150!3.09e-15!3;CL:0000861!3.09e-15!3;CL:0002602!2.40e-10!2;CL:0000667!4.69e-08!6;CL:0000058!4.69e-08!6;CL:0000138!4.69e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.55e-98;2!UBERON:0010056;1.55e-98;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14!DOID:7;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0009568!2.40e-10!2;UBERON:0002216!2.40e-10!2;UBERON:0002209!2.40e-10!2;UBERON:0002213!2.40e-10!2;UBERON:0004267!2.40e-10!2;UBERON:0006444!2.40e-10!2;UBERON:0001995!2.40e-10!2;UBERON:0004715!2.40e-10!2;UBERON:0001468!2.40e-10!2;UBERON:0001130!2.40e-10!2;UBERON:0001066!2.40e-10!2;UBERON:0002418!3.60e-07!3;UBERON:0004755!3.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.39e-66;3!UBERON:0001033;2.39e-66;3!UBERON:0003343;3.10e-50;4!UBERON:0004785;3.10e-50;4!UBERON:0000974;4.27e-34;6!UBERON:0003729;1.21e-16;13!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.39e-66,3;UBERON:0001033,2.39e-66,3;UBERON:0010056,2.39e-66,3;UBERON:0003343,3.10e-50,4;UBERON:0004785,3.10e-50,4;UBERON:0000974,3.81e-21,10;UBERON:0001042,3.81e-21,10;UBERON:0009145,3.81e-21,10;UBERON:0006562,2.25e-19,11;UBERON:0003729,1.21e-16,13;UBERON:0008814,1.85e-12,18;UBERON:0001557,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0.19351266257817,0.365446585430928,0.246346371159628,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4260389891571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:128111291..128111299,- | |||
}} |
Revision as of 05:32, 11 January 2014
Short description: | p@chr10:128111291..128111299, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128111291..128111299, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.39e-66 | 3 |
gustatory system | 2.39e-66 | 3 |
future tongue | 2.39e-66 | 3 |
mucosa of oral region | 3.10e-50 | 4 |
respiratory system mucosa | 3.10e-50 | 4 |
neck | 3.81e-21 | 10 |
chordate pharynx | 3.81e-21 | 10 |
pharyngeal region of foregut | 3.81e-21 | 10 |
pharynx | 2.25e-19 | 11 |
mouth mucosa | 1.21e-16 | 13 |
pharyngeal arch system | 1.85e-12 | 18 |
upper respiratory tract | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |