FFCP PHASE1:Hg19::chr10:104179450..104179484,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9507 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z4R5 | |||
|association_with_transcript=0bp_to_ENST00000466551,ENST00000472685,ENST00000541902,uc001kvh.1,uc001kvi.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_PSD_5end | |||
|id=chr10:104179450..104179484,- | |||
|ontology_enrichment_celltype=CL:0000047!1.34e-11!8;CL:0000540!3.94e-09!6;CL:0000031!3.94e-09!6;CL:0000404!3.94e-09!6;CL:0002319!8.92e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.68e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.63e-20;82!UBERON:0006215;3.61e-08;3 | |||
|ontology_enrichment_disease=DOID:171!8.91e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;5.96e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.93e-07,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.88e-54;32!UBERON:0002780;8.68e-54;41!UBERON:0001890;8.68e-54;41!UBERON:0003528;5.55e-52;34!UBERON:0002020;5.55e-52;34!UBERON:0002619;6.81e-52;22!UBERON:0001893;1.01e-51;34!UBERON:0002791;5.29e-51;32!UBERON:0000073;3.33e-48;53!UBERON:0002616;3.33e-48;53!UBERON:0001950;2.99e-47;20!UBERON:0000956;4.75e-45;25!UBERON:0000203;4.75e-45;25!UBERON:0000955;6.91e-36;68!UBERON:0001017;1.08e-35;75!UBERON:0001016;1.81e-31;83!UBERON:0002420;5.62e-17;9!UBERON:0007245;5.62e-17;9!UBERON:0010009;5.62e-17;9!UBERON:0010011;5.62e-17;9!UBERON:0000454;5.62e-17;9!UBERON:0001871;1.39e-16;6!UBERON:0000125;1.99e-16;9!UBERON:0002308;1.99e-16;9!UBERON:0001894;4.65e-16;7!UBERON:0000200;1.66e-14;6!UBERON:0004733;1.23e-13;12!UBERON:0002028;1.23e-13;12!UBERON:0000349;8.48e-13;5!UBERON:0002021;8.58e-13;5!UBERON:0009663;1.19e-12;7!UBERON:0001872;1.21e-12;5!UBERON:0007023;1.33e-12;114!UBERON:0004732;1.92e-12;13!UBERON:0002298;2.28e-12;6!UBERON:0011216;9.27e-12;132!UBERON:0000369;6.56e-11;4!UBERON:0002435;6.56e-11;4!UBERON:0000204;6.56e-11;4!UBERON:0003296;3.51e-10;4!UBERON:0010133;3.51e-10;4!UBERON:0002784;5.52e-10;4!UBERON:0002680;6.66e-09;9!UBERON:0001895;6.66e-09;9!UBERON:0005383;9.33e-09;3!UBERON:0005382;9.33e-09;3!UBERON:0001870;6.06e-08;3!UBERON:0000988;2.74e-07;3!UBERON:0010314;3.02e-07;132!UBERON:0001896;9.82e-07;3!UBERON:0005290;9.82e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,5.20559415430487,6.18631050222156,13.5688174920822,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0.242721043499027,0,0,0,0,0,22.8653958986249,37.1367259323754,0,0,0,0.19924798825107,0,10.8331081577339,0,0,0,0,0,0,0,0,0,21.3253204140948,16.8837938654569,53.8957254603224,0,0,0,0,0,0,1.72371686620732,0.874813840149763,4.68787486319889,38.9726209758089,59.2128513650753,22.8872604475625,38.3710031961349,18.915047613027,15.795748595086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,14.524395634971,0,0,0,0,1.20990716048664,43.7684049131601,0.31593289814244,4.96067284067825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,5.64951851951331,0,0,16.714050132352,0,0,0,0,0,0,5.3194449337209,0,0,0,0,0,0,0,22.815970970972,8.07741735462759,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,42.1471735598931,28.7389186895425,0.964518890790115,1.65047323916681,0.415440338029185,0,0,22.4165864068111,0,0,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,11.8940319852627,6.6116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1770908794718,26.9678045433339,30.296205230973,1.72022758707021,4.32623300993724,4.47094101177961,4.15045904808692,0,0,0,0,3.74667924645505,2.46365748638403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5229234425946,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,3.58104239650225,2.15649622793364,0.157265941855896,8.84598069355313,0,3.18862380152524,0,0,0,0,2.40171224485641,0,0,24.5355639868475,28.339315265117,30.4900670799159,18.0502400531864,56.2119882574431,26.8330139561165,24.8672494273051,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,16.3440954776515,28.1188115500985,29.5562118996693,17.4393478033244,55.2444557108402,0,0,1.58284119923659,0,28.9278991374275,25.5575628886306,16.3880713143891,19.8066106475629,0,0,0,5.64148783707703,20.3895598044832,0,0,0,58.6041150386687,0,0.913158720509496,0,0,3.07349139959622,3.16027223465453,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44484980578001,9.94753875806841,0,0,7.47595513868918,5.28369952483357,0.154348316215889,0.655678681511872,3.76253837089218,0,7.3059729601504,5.10402014498858,0.891139200981258,5.9171801861676,0,0,0,0.0999411559249289,0,0,0,0,0,0.860037498908708,0,25.0888598804475,61.5254473379932,3.1741610430924,0,0,0,0,0.218531143927391,1.14028650910293,0,0,0,0.50141507858475,0.303114792872958,2.41167717140561,13.2667110313405,11.6879285323942,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@PSD | |||
}} |
Revision as of 04:41, 11 January 2014
Short description: | p3@PSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PSD_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000466551, ENST00000472685, ENST00000541902, uc001kvh.1, uc001kvi.1_5end |
EntrezGene: | PSD |
HGNC: | 9507 |
UniProt: | Q7Z4R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.68e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.93e-07 | 10 |