FFCP PHASE1:Hg19::chr10:99446948..99446963,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60370 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30898 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T686 | |||
|association_with_transcript=51bp_to_NM_021732,uc001koi.2_5end | |||
|description=CAGE_peak_3_at_AVPI1_5end | |||
|id=chr10:99446948..99446963,- | |||
|ontology_enrichment_celltype=CL:0000066!3.40e-13!254;CL:0002076!3.77e-07!43;CL:0000223!8.30e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.14e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-13!169;UBERON:0000925!5.16e-13!169;UBERON:0006595!5.16e-13!169;UBERON:0000062!2.57e-11!511;UBERON:0001007!2.75e-11!155;UBERON:0001555!2.75e-11!155;UBERON:0007026!2.75e-11!155;UBERON:0000077!3.49e-09!130;UBERON:0004921!7.01e-09!129;UBERON:0004185!7.01e-09!129;UBERON:0000468!1.02e-07!659;UBERON:0001737!2.43e-07!9;UBERON:0001004!7.48e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-09;9!UBERON:0001557;1.96e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.04e-11,160;UBERON:0000925,2.04e-11,160;UBERON:0006595,2.04e-11,160;UBERON:0001737,2.44e-09,9;UBERON:0001007,6.49e-09,145;UBERON:0001555,6.49e-09,145;UBERON:0007026,6.49e-09,145;UBERON:0004921,4.60e-07,118 | |||
|phase1_expression=1.45342703416445,1.07050261945492,1.26858963686374,1.0007329835313,1.78784437770915,1.74467704820074,0,1.89515962028049,0.783556884599516,1.22866968250754,2.79120467188971,1.96597234917155,1.05506791291381,1.23766352960047,3.97676850873499,0.672325146451775,0,0,0,1.35433163884467,0.204000691244253,0,0.286235987131057,0.410623275218653,0,0,0.0821005894499457,0,0,0,0.928896739896456,3.67768489791571,0.6024118375565,2.58827807116751,0,0,0.880801318004542,0,0.601633342410425,0.434021741431704,1.11957737119962,1.29557466407592,0.77272670290256,0.726991193897824,0.377875943688809,0.727752183563449,0.929716147622738,1.6446715520873,1.54853185447552,0,0.256160706529101,0,0.344745680736619,1.29096936716765,0,0.752969358170419,1.63743690034707,0.674170453335254,0.918251677112708,0.962787081228281,0,0,0,0,0.290209238628584,0,0,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0,0.632924774881769,0.422510572623884,0.637812899895131,0.209658645508376,1.12328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0.786839080455332,0,0.411202997999018,0,0.977766799900771,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,0.434473211648397,0,1.34140171940727,1.2786256184353,2.89151321907653,0.50133791063589,2.02785126545153,0,1.94653948121054,0.378139268656271,0.221729397462564,0,0.916853528483988,3.64295288292542,1.85392221392215,1.29818957461873,0.696518949197069,1.19662164466979,0.715471872916026,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,2.61656431285521,1.49091585508596,0.886413581652058,1.72131935057184,2.58152958673932,0.709336764396714,1.12135520028461,0,0.74000264525148,0.933633106199299,0.134710672069688,0.980771418680752,0.151357427644931,0,2.34321431833797,1.24864030732128,0,1.04614076386261,0,0.485618833104395,0,0.816616685019573,0.368502951935304,1.34323515528495,2.37600571456411,1.7308685049499,0,0.718618141816238,0.505008341862199,0.625592599359821,0,1.31693286264251,1.22595118319608,2.85452311922534,0.453728732640084,1.61450672119976,0.427114777637135,0.635795703478686,1.20036438433761,1.13357782162283,1.54584324027377,1.30281799432113,1.0126579934476,1.16924406193438,1.26216887122057,1.01254888506529,1.77810662500693,1.42003837006646,0.806016785821122,0.847802961552438,1.54608682530637,1.36373060295417,1.43402297694502,1.21973706129595,1.06023814657188,1.16193942869518,0.829288440122964,1.26160425437814,0.72995471815166,0,1.28648187638577,0,0.928735856063958,1.44375896333917,4.61396520155391,6.57480291304597,3.13314338848527,4.41175890929576,7.84365998732662,2.84724742933316,4.98875840192608,3.33576490713088,4.23221872641029,0,0,1.2347220339942,0,1.26755034821831,0,2.36315962672562,0,0.737930631258681,0.514703430895577,1.42675371031213,5.62008766288098,1.40740561376283,0.833296006426766,5.86454949558584,2.07986957055916,0,0.463721619900307,0.234817388471643,0.577465791044295,0.462985512576611,0.190254152234598,0.790204397959275,3.43394464837949,1.72351904261178,1.17002132569619,0.445893486866185,0,1.00789276919316,0.850650583454319,2.32852159027406,1.16253575405585,0.766765358330422,0,0,1.03664057770386,0.144119953416961,1.38866676769018,1.65094525159639,5.72982638337417,0,1.71072446022705,1.43958489784653,8.10926256178577,1.71495859578347,0.224262168690721,1.30788020649984,0.07333828582095,1.03417372606222,3.57656445851882,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0.799266537048298,0.428933980974443,2.71310802695722,2.46972101034231,0,0.355391948742546,2.37585561880029,1.50719688529793,0,1.59956785891291,3.64871341923571,2.00902836572851,0,0.239624855491583,0,0,0.723906533337896,1.02738161275192,0.716243852959582,0,0.591092280605782,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.50051156317903,1.35632511849868,1.03985430765404,1.42743191037729,2.68094105557689,1.40569697991256,2.10662269809403,9.09630016223939,2.0694614258501,0,0.737476674166813,0.60818530127658,0.391602314925481,1.71571711905428,0,0.215714200818617,0.640365346820666,3.33440328590885,11.6504807657348,1.5119514666484,1.48864684691266,1.2276957863045,1.12264037773229,2.43464383585832,2.04682899626681,0.965123526861645,5.93672265779964,0,0,0.492762936082855,0,0.116210378459959,1.0877350463246,0.601519410909855,2.20994373446151,1.49258782613989,0.364182336013434,2.09799063935079,1.35359883872224,0.693138033939733,3.13739907670742,2.92278449306521,0.73886140225013,1.13733384070897,0,0.647747748306418,0,0,1.00337954770971,1.52925763827023,1.66215201785745,0.895499018888713,0.438519753291869,0.261435451024901,2.05160100093111,1.96808787419823,0.976135183992909,1.64865618636356,0.366277859273374,0.330037999682352,1.14853107599234,0,0,0.96670718292122,0.462145851343933,0.307007349452259,0.551346289938122,0.537101224341368,0.580066775656914,0.426133137080504,0.445160178233687,1.32227932288782,1.34533047155574,0.255225424989168,1.8208400553999,1.85938219718914,2.83331112147576,0.6970372701606,1.54016790088044,0,0,0.37064843820784,0.429374660225974,0.744316738719335,1.2655176988749,0.953150969619124,3.07077349573601,1.71175595213568,0.318203247925937,0,1.2591072030832,1.37268514868027,1.17812402345686,0.404364963146632,1.58510321173008,0.421258456238981,0.975267478179181,1.94970791705028,1.05650146756755,1.09199929126389,0.989838023675989,1.13008116620243,0.551365343546124,1.32687795048244,1.75380354101505,0,0.655894752046633,0.608731130888112,0.30982349809975,0.563391205064483,0.286822704408103,0.785992328104969,1.07001315444375,0.354761064070598,3.37772216476263,2.30506425071931,1.13841952129715,3.49934720244983,1.44333169088268,1.34060455107157,1.08890984861323,1.31801321087491,0,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,1.6023610669121,0.962479855263359,1.22520107990516,0,0.432807638929335,0.142283686696828,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0.781552381608161,0.278406173895242,0,0.540911356951966,0,0,1.12284324244932,0.73254089635947,0.606802608747567,0.111443384277478,0.852408440419239,2.86493381685228,2.96964680832639,0.921482106297696,0.994147647766298,0,0.556543525114529,0.824019371133798,0.844501632511974,0.996239941255349,0.276283915531148,0.251932747854276,0.920418142519393,0,0.622079175323615,1.3480252672099,3.75944466818779,0,1.67693789582787,0,2.22273980289274,0,1.11321717794222,0,0.520855522170466,0.349839999984783,1.44999915086959,2.50345586228099,0.254253650292766,1.41832609060762,2.41320361269025,0,0,1.77148277162768,0.723578631752448,0,0.552896299656123,2.36438095162838,1.75508317723178,3.81284622316466,1.81250867562184,1.30815439456455,1.13942055847001,0,0.807818799687949,3.15077378573823,1.27600463892768,0.732780747214898,1.06606955203727,0,0.156980256395025,0.831058409500782,0.451191321234361,0.19606253431774,0.167821586975843,0.569261198172555,0.476809736941136,0,1.14262965711403,2.26164914294305,1.51472047819464,1.99052386215701,1.06149077404007,1.83309043480088,0.593042257361244,0.247127877893006,0.313265848516366,0,0,0.702793337176017,0,0.782658475728359,0.728341138602278,0,0,0,0.884612114798832,1.05226393590145,0.103688191397247,0.664653872707185,1.323967823502,0.941798755221676,0,0.569219092059585,1.10939738410511,1.04135843001079,1.17590876897253,1.65412492502765,0.873633341210151,0.343972064943233,2.22539561964896,3.43519790305072,2.54557916864949,0.969890164884194,0.353024506766001,0.677942222341597,0,0.794858446811959,0.696418755514666,1.75996244461323,0.400794101257669,1.70762395791482,0.599428828746391,1.29681375438695,0,0.171594997861965,4.17758914165634,0.248505071130865,3.77110455386873,0.815425236441684,0.418411385249333,1.52997326454483,0.866851769704557,0,0.410716136675979,0,0.429765441419957,0.788662062837943,0.279282401272254,0.687481272035051,0,0.798716001995964,0.858452096273142,0.89268582976749,0.806201669840715,1.08089965062721,0,1.02418136999391,0.988990300573997,1.28066733322951,1.57483970423598,0,0,0,1.92903778158023,1.2378549293751,1.24632101408756,2.249738915515,1.5476039091159,0.789744236554321,4.36065093879046,0.236417121897595,0.314727528809989,0.105600336519406,3.40645944732405,1.53532157855556,0,0,0.5085370753095,0.542999601753713,0.864221491201268,0.653174720218818,1.19730191562487,0,0.170388021785422,0.453248366080503,2.34483573884932,3.97520666736664,0,0.13223260174269,1.71086837884329,0.704815022316672,1.38823636338003,0.628817220398664,0.828478110694391,0,0,0.121792598380896,1.91502377331055,3.26410682021684,1.2534494701135,3.06345576763462,2.29510841496863,0.314108192500469,0,0.366078794705889,0.250381861413,0,0.221858103073705,0.18628920882415,0.691743174681154,0.37494122388632,1.06154382279153,1.42732666772484,0.941063278792687,0,0.434763085832475,0.597019211547496,0.233713309847224,1.66441758450784,1.89403005275089,2.51567901752575,1.77962244319307,2.97492088916001,2.41969478021182,1.39893480524502,0.591420599958536,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0.901545653983311,1.14241563650639,0.406870733204662,0.545545977607678,1.18151612746737,0.464033759878494,0,0.800055529326307,1.03018711554838,0,0,0.192619830407303,0.857766365499703,0.260994291965212,1.13352962756136,0.231522474323834,2.20263034055821,0.358177682162975,1.85280868296583,1.31570429747224,0.530067437837643,0.771656153083659,0.844712203265363,0.256241518587947,1.72715170865599,2.12701969324168,0.276516872303462,0.194860308839388,0.531459361253452,0.817826971279221,1.96565909307848,2.21195617878347,0.633936370075881,0.19998739585493,0.426766918776564,0,2.27006381426734,0.736423801007363,4.19638523158333,3.11038630016486,0.255788742607303,0.215649622793364,0.314531883711793,0.327628914576042,0.169732529954025,0,0.371807292777007,0.558644917973244,0.636008701306837,0.157723490002507,0,2.82140754952547,1.8374728641192,0.706521476061055,2.8339315265117,0.319267718114302,0.82046545696302,0.252071696221718,1.59061680667701,0,0,0.687034029507179,1.41563668017288,0.917142992608395,2.88814165375846,0,0.690359926060101,1.19349733269765,1.27857558193737,0.60511520611056,2.34454203369928,1.30953347240711,1.47394725759087,0.295712172434091,0.742913430802341,0,0.620060389503552,0.760989722326882,0,0.548257766857182,0.992422356778588,0.175871244359621,0.766574565837572,0,0,0,0.455324382702595,1.1531308121143,0.115233987555779,1.71488009437418,0.203909198930495,1.11813715056843,3.78220290828698,0.556157009460346,1.0989032999072,0.314231179832004,0.840816489941367,0,0.215927591218621,0.47775168788705,1.07214816264985,1.26410889386181,0.23248285073625,0,0.801711364730253,3.31545862660859,3.0729325876911,2.07377898544228,0.860454717640555,1.18332000730565,0.681707238073262,0.846774100381858,0.9164274741762,0.93061915699296,0,1.23040974977572,2.0611549059201,1.21917924982269,0,1.33461648913121,0,0,0.467878926924211,0.397901550322736,0.475680363110274,0.67767649223376,0.659643100472575,0.301925687133347,1.23478652972711,1.31135736302374,0,0.735444965261716,0.707029641304878,0,0,0,1.35941691750254,0.0939839179798536,0.257831551894309,0.0999411559249289,0.892769693028288,0,1.20362050033752,0.730336388246517,0.917458566809082,0.286679166302903,1.26217249754548,1.01987235286372,0,0.5290268405154,2.23197010900051,3.23522940041993,1.29787968637137,1.13549782351571,0.655593431782173,0.633492505057185,1.1218771271618,0,1.01084389488329,0.50141507858475,1.13668047327359,0.535928260312357,0,0.20686599172379,1.27940389140589,0.23806443146374,0.0645889098360061,0.31037357147929,1.23345048838675,1.14564884900697,0.404234377916439,1.30630048738177,0.684466602170562,0.336760265072938,1.2192774916755,0.332660356546013,0.732629417498771,1.60091018816573,1.9307228228694,0.988077223172456,2.34640942403454,0.733448665097199,1.22068853494722,2.66302709674205,0.402547587182052,0 | |||
|short_description=p3@AVPI1 | |||
}} |
Revision as of 04:27, 11 January 2014
Short description: | p3@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.04e-11 | 160 |
endoderm | 2.04e-11 | 160 |
presumptive endoderm | 2.04e-11 | 160 |
larynx | 2.44e-09 | 9 |
digestive system | 6.49e-09 | 145 |
digestive tract | 6.49e-09 | 145 |
primitive gut | 6.49e-09 | 145 |
subdivision of digestive tract | 4.60e-07 | 118 |