FFCP PHASE1:Hg19::chr10:96731879..96731924,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr10:96731879..96731924,+ | |||
|id=chr10:96731879..96731924,+ | |||
|ontology_enrichment_celltype=CL:0000313!7.03e-13!1;CL:0000181!4.21e-09!12;CL:0000417!4.21e-09!12;CL:0000668!4.21e-09!12;CL:0000414!4.21e-09!12;CL:0000412!4.21e-09!12;CL:0000182!4.21e-09!12;CL:0000159!4.56e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0000182;4.54e-12;12!CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0000182,4.54e-12,12;CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!7.03e-13!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.84e-34;1!DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-34,1;DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004911!7.03e-13!1;UBERON:0006834!3.85e-12!1;UBERON:0005172!4.65e-12!55;UBERON:0005173!4.65e-12!55;UBERON:0002417!8.74e-11!61;UBERON:0000916!8.74e-11!61;UBERON:0002107!8.66e-10!19;UBERON:0006925!8.66e-10!19;UBERON:0008836!8.66e-10!19;UBERON:0008835!1.77e-08!22;UBERON:0003894!1.77e-08!22;UBERON:0009854!4.07e-08!23;UBERON:0002368!6.31e-08!35;UBERON:0007499!1.77e-07!25;UBERON:0009497!1.77e-07!25;UBERON:0000015!1.77e-07!25;UBERON:0002423!1.77e-07!25;UBERON:0006235!1.77e-07!25;UBERON:0004161!1.77e-07!25;UBERON:0005057!3.39e-07!26;UBERON:0009856!3.39e-07!26;UBERON:0004909!4.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.84e-34;1!UBERON:0004909;5.48e-18;2!UBERON:0002107;2.21e-16;19!UBERON:0006925;2.21e-16;19!UBERON:0002423;1.20e-12;25!UBERON:0002365;1.15e-10;31!UBERON:0002330;1.15e-10;31!UBERON:0002368;3.12e-08;33!UBERON:0000949;3.62e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.84e-34,1;UBERON:0004909,5.48e-18,2;UBERON:0002107,2.27e-16,19;UBERON:0006925,2.27e-16,19;UBERON:0008836,2.27e-16,19;UBERON:0008835,2.99e-14,22;UBERON:0003894,2.99e-14,22;UBERON:0009854,1.15e-13,23;UBERON:0007499,1.23e-12,25;UBERON:0009497,1.23e-12,25;UBERON:0000015,1.23e-12,25;UBERON:0002423,1.23e-12,25;UBERON:0006235,1.23e-12,25;UBERON:0004161,1.23e-12,25;UBERON:0009856,3.51e-12,26;UBERON:0002365,2.44e-10,31;UBERON:0002330,2.44e-10,31;UBERON:0002368,3.06e-09,35;UBERON:0000949,2.44e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26914319044689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60616936224988,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:96731879..96731924,+ | |||
}} |
Revision as of 04:16, 11 January 2014
Short description: | p@chr10:96731879..96731924, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:96731879..96731924, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
hepatocyte | 4.54e-12 | 12 |
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.84e-34 | 1 |
epithelium of gonad | 5.48e-18 | 2 |
liver | 2.27e-16 | 19 |
digestive gland | 2.27e-16 | 19 |
liver bud | 2.27e-16 | 19 |
hepatic diverticulum | 2.99e-14 | 22 |
liver primordium | 2.99e-14 | 22 |
digestive tract diverticulum | 1.15e-13 | 23 |
epithelial sac | 1.23e-12 | 25 |
epithelium of foregut-midgut junction | 1.23e-12 | 25 |
anatomical boundary | 1.23e-12 | 25 |
hepatobiliary system | 1.23e-12 | 25 |
foregut-midgut junction | 1.23e-12 | 25 |
septum transversum | 1.23e-12 | 25 |
sac | 3.51e-12 | 26 |
exocrine gland | 2.44e-10 | 31 |
exocrine system | 2.44e-10 | 31 |
endocrine gland | 3.06e-09 | 35 |
endocrine system | 2.44e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-34 | 1 |
female reproductive endometrioid cancer | 8.48e-07 | 6 |