FFCP PHASE1:Hg19::chr10:88855122..88855162,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2746 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4335 | |||
|TSSclassifier=weak | |||
|UniProt=E9KL48,P00367 | |||
|association_with_transcript=-346bp_to_NM_005271_5end | |||
|description=CAGE_peak_6_at_GLUD1_5end | |||
|id=chr10:88855122..88855162,- | |||
|ontology_enrichment_celltype=CL:0000860!1.74e-23!45;CL:0002057!4.66e-22!42;CL:0000766!7.41e-14!76;CL:0000557!1.90e-13!71;CL:0000839!3.20e-13!70;CL:0002194!6.02e-13!63;CL:0000576!6.02e-13!63;CL:0000040!6.02e-13!63;CL:0000559!6.02e-13!63;CL:0002009!1.44e-12!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.06e-38;33!CL:0002057;4.06e-38;33!CL:0000473;2.65e-25;39!CL:0000234;2.65e-25;39!CL:0000576;6.43e-22;48!CL:0000766;2.10e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.66e-42,42;CL:0002057,5.66e-42,42;CL:0000473,3.44e-35,48;CL:0000234,3.44e-35,48;CL:0000766,5.74e-28,72;CL:0002194,9.22e-26,59;CL:0000576,9.22e-26,59;CL:0000040,9.22e-26,59;CL:0000559,9.22e-26,59;CL:0000839,6.49e-25,66;CL:0002009,1.49e-24,61;CL:0000557,2.28e-24,67;CL:0000763,1.83e-15,108;CL:0000049,1.83e-15,108;CL:0000738,3.34e-15,136;CL:0002087,1.24e-13,115;CL:0002031,1.79e-12,120;CL:0000037,3.97e-11,168;CL:0000988,6.86e-10,177;CL:0002032,1.89e-09,161;CL:0000837,1.89e-09,161;CL:0000134,3.12e-07,354;CL:0002320,9.31e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.86e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.15e-13!86;UBERON:0002371!4.40e-13!80;UBERON:0004765!7.79e-12!101;UBERON:0001434!7.79e-12!101;UBERON:0002405!1.28e-08!115;UBERON:0002390!4.01e-08!102;UBERON:0003061!4.01e-08!102;UBERON:0003081!8.90e-08!216;UBERON:0000062!1.06e-07!511;UBERON:0000467!2.39e-07!625;UBERON:0000480!3.55e-07!626;UBERON:0002193!7.58e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.21e-23,76;UBERON:0001474,7.19e-23,82;UBERON:0004765,1.02e-19,90;UBERON:0002390,2.02e-17,98;UBERON:0003061,2.02e-17,98;UBERON:0002405,1.27e-16,93;UBERON:0001434,1.61e-16,100;UBERON:0002193,1.09e-14,108;UBERON:0003081,1.34e-13,203;UBERON:0002204,3.87e-09,167;UBERON:0000926,3.10e-07,315;UBERON:0004120,3.10e-07,315;UBERON:0006603,3.10e-07,315 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,2.00146596706261,0,0,0,1.26343974685366,1.04474251279935,0.245733936501509,0,1.09220686065086,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0.410502947249729,0.393553906568396,1.57345710739562,1.91914699048606,2.01260960310899,0.919421224478927,0.6024118375565,0,0.0774672005803016,0,1.76160263600908,8.30993112797816,5.81578897663411,6.2933152507597,0,0,0.257575567634187,2.61716829803216,1.88937971844405,1.4555043671269,3.0215774797739,2.87817521615278,2.47765096716083,4.60307827715441,3.58624989140741,2.83778675866302,3.44745680736619,1.93645405075148,1.35426486594342,3.20011977222428,2.72906150057846,4.04502272001152,3.36692281607993,3.85114832491312,4.47535988059329,1.9791078011203,3.39088217956774,2.13112375266347,5.5139755339431,2.8369261234557,3.11411124497787,3.51748131359441,4.17186334736161,3.25783267057675,2.42159801053347,2.57794345191295,2.53169909952708,0.211255286311942,0.425208599930087,1.67726916406701,0.898629049171961,0.600707571366025,0.64290234678832,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,1.32171328579026,5.60508562981536,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.604820229674197,1.06976078313403,1.15859523106239,0,0,0.12786256184353,1.0843174571537,0,0.289693037921647,0,1.45990461090791,0.0945348171640679,0,0.263504357079378,0.327447688744282,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0.571994910780128,1.11437250398869,0.39752481473341,1.72046919021225,2.08284300964557,1.69592382577203,0.419499436209906,0.825354125820202,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0.898117490504679,0.450445921933289,1.53316637465883,1.89853131913626,0.366403487860815,1.31780417436063,0,0,0.993943903390637,0.12663051166458,0.529636723252875,0.286836620748814,1.06400514659507,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,0,0.980771418680752,0.302714855289863,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,1.13311061057692,0.421352420106746,0.61246251376468,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0,0.168336113954066,0.750711119231785,0.277064115484183,0,0,0.300476117813194,0.340296549480063,1.25572744982203,0,0,0.600182192168805,0.721367704669072,0.257640540045629,0,0.843881661206331,0.292311015483596,0,0.276149695926898,0.646584227275248,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0.272746120590835,0.573609190778008,0.121973706129595,0.530119073285941,0,0,0.504641701751257,0,1.56449532329816,0,2.76269842704961,0,0,0.709840800239063,0.337169380156203,0.723033089650446,0.882351781859152,0.435758888184812,0.71181185733329,0.943819157121151,0.588664395376038,0.769494313892781,1.4763109092493,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,2.07986957055916,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,2.46331618947972,0.704387472105808,1.24396869324463,0.432359860250884,0.75745460055828,0.317489471460845,1.14596527667483,2.34434894420094,0,0.719792448923265,0.901029173531752,1.42913216315289,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0.514414748524284,0,2.66422179016099,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,0,0.718874566474748,0,1.42636905040718,0.144781306667579,0.61642896765115,0.179060963239896,0,0.985153801009636,1.50939302401662,2.31017465303547,1.27047312111232,0,0,0.335032530668698,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,1.03985430765404,1.60586089917446,0.315404830067869,0.702848489956279,0,0,0,0,0.737476674166813,0.347534457872331,0,0.686286847621712,0.82707210449155,2.80428461064202,1.81436848265855,2.12189300012382,3.32870879020994,0.604780586659361,0,0.306923946576125,0.841980283299221,0.512556597022804,0,0.64341568457443,0,0.462629081407967,0.532685175939381,0.492762936082855,0,0.581051892299796,0.120859449591622,0,0,0.34444334449382,0.364182336013434,0.655622074797121,0,0,0,0,0,0,1.36074964221213,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0.27470839445503,0.41254749960294,0,0,0,0.290012154876366,0,0,0.413509717453592,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0.62962469366128,0.6970372701606,1.23213432070436,0,0,0.55597265731176,0.143124886741991,0,0,0.38126038784765,0.5117955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| |||
|short_description=p6@GLUD1 | |||
}} |
Revision as of 03:57, 11 January 2014
Short description: | p6@GLUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GLUD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -346bp_to_NM_005271_5end |
EntrezGene: | GLUD1 |
HGNC: | 4335 |
UniProt: | E9KL48P00367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.66e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.66e-42 | 42 |
defensive cell | 3.44e-35 | 48 |
phagocyte | 3.44e-35 | 48 |
myeloid leukocyte | 5.74e-28 | 72 |
monopoietic cell | 9.22e-26 | 59 |
monocyte | 9.22e-26 | 59 |
monoblast | 9.22e-26 | 59 |
promonocyte | 9.22e-26 | 59 |
myeloid lineage restricted progenitor cell | 6.49e-25 | 66 |
macrophage dendritic cell progenitor | 1.49e-24 | 61 |
granulocyte monocyte progenitor cell | 2.28e-24 | 67 |
myeloid cell | 1.83e-15 | 108 |
common myeloid progenitor | 1.83e-15 | 108 |
leukocyte | 3.34e-15 | 136 |
nongranular leukocyte | 1.24e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.79e-12 | 120 |
hematopoietic stem cell | 3.97e-11 | 168 |
hematopoietic cell | 6.86e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.89e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-09 | 161 |
mesenchymal cell | 3.12e-07 | 354 |
connective tissue cell | 9.31e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.21e-23 | 76 |
bone element | 7.19e-23 | 82 |
skeletal element | 1.02e-19 | 90 |
hematopoietic system | 2.02e-17 | 98 |
blood island | 2.02e-17 | 98 |
immune system | 1.27e-16 | 93 |
skeletal system | 1.61e-16 | 100 |
hemolymphoid system | 1.09e-14 | 108 |
lateral plate mesoderm | 1.34e-13 | 203 |
musculoskeletal system | 3.87e-09 | 167 |
mesoderm | 3.10e-07 | 315 |
mesoderm-derived structure | 3.10e-07 | 315 |
presumptive mesoderm | 3.10e-07 | 315 |