FFCP PHASE1:Hg19::chr10:81320162..81320168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653509,729238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10798,10799 | |||
|TSSclassifier=strong | |||
|UniProt=E3VLC8,Q8IWL1 | |||
|association_with_transcript=0bp_to_ENST00000486566,ENST00000491208,NM_001098668,uc001kal.3,uc001kam.2,uc001kan.3_5end | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_1_at_SFTPA1_5end,CAGE_peak_1_at_SFTPA2_5end | |||
|id=chr10:81320162..81320168,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.78e-14;29!UBERON:0001041;3.73e-08;30 | |||
|ontology_enrichment_disease=DOID:3493!2.02e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.66e-18!1;UBERON:0006518!2.66e-18!1;UBERON:0008949!2.66e-18!1;UBERON:0000101!2.66e-18!1;UBERON:0002167!2.66e-18!1;UBERON:0003127!1.22e-09!2;UBERON:0000341!1.57e-09!2;UBERON:0005178!3.42e-08!34;UBERON:0002224!3.42e-08!34;UBERON:0005181!5.77e-08!35;UBERON:0002048!1.77e-07!22;UBERON:0000117!1.77e-07!22;UBERON:0000171!1.77e-07!22;UBERON:0000170!1.77e-07!22;UBERON:0005597!1.77e-07!22;UBERON:0000118!1.77e-07!22;UBERON:0008947!2.35e-07!38;UBERON:0003258!2.35e-07!38;UBERON:0002110!9.64e-07!3;UBERON:0006242!9.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.16e-26;1!UBERON:0006518;2.16e-26;1!UBERON:0008949;2.16e-26;1!UBERON:0000101;2.16e-26;1!UBERON:0002167;2.16e-26;1!UBERON:0003127;1.21e-13;2!UBERON:0002048;6.93e-11;22!UBERON:0000117;6.93e-11;22!UBERON:0000171;6.93e-11;22!UBERON:0000170;6.93e-11;22!UBERON:0005178;8.27e-10;34!UBERON:0002224;8.27e-10;34!UBERON:0005181;1.59e-07;35!UBERON:0000065;1.61e-07;44!UBERON:0001052;2.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.16e-26,1;UBERON:0006518,2.16e-26,1;UBERON:0008949,2.16e-26,1;UBERON:0000101,2.16e-26,1;UBERON:0002167,2.16e-26,1;UBERON:0003127,1.21e-13,2;UBERON:0005178,3.88e-12,34;UBERON:0002224,3.88e-12,34;UBERON:0005181,8.37e-12,35;UBERON:0008947,6.60e-11,38;UBERON:0003258,6.60e-11,38;UBERON:0002048,6.93e-11,22;UBERON:0000117,6.93e-11,22;UBERON:0000171,6.93e-11,22;UBERON:0000170,6.93e-11,22;UBERON:0005597,6.93e-11,22;UBERON:0000118,6.93e-11,22;UBERON:0000915,4.46e-08,52;UBERON:0000065,8.61e-08,54;UBERON:0001052,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33482822787191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8987259102265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6864329211775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,102.83627830269,2.82967749179399,188.893009238321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,4.30333232356058,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SFTPA1,p1@SFTPA2 | |||
}} |
Revision as of 03:46, 11 January 2014
Short description: | p1@SFTPA1, p1@SFTPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFTPA1_5end, CAGE_peak_1_at_SFTPA2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000486566, ENST00000491208, NM_001098668, uc001kal.3, uc001kam.2, uc001kan.3_5end |
EntrezGene: | 653509,729238 |
HGNC: | 10799&submit=Submit 10798, 10799 |
UniProt: | E3VLC8Q8IWL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.16e-26 | 1 |
right lung lobe | 2.16e-26 | 1 |
lower lobe of lung | 2.16e-26 | 1 |
lobe of lung | 2.16e-26 | 1 |
right lung | 2.16e-26 | 1 |
open tracheal system trachea | 1.21e-13 | 2 |
thoracic cavity element | 3.88e-12 | 34 |
thoracic cavity | 3.88e-12 | 34 |
thoracic segment organ | 8.37e-12 | 35 |
respiratory primordium | 6.60e-11 | 38 |
endoderm of foregut | 6.60e-11 | 38 |
lung | 6.93e-11 | 22 |
respiratory tube | 6.93e-11 | 22 |
respiration organ | 6.93e-11 | 22 |
pair of lungs | 6.93e-11 | 22 |
lung primordium | 6.93e-11 | 22 |
lung bud | 6.93e-11 | 22 |
thoracic segment of trunk | 4.46e-08 | 52 |
respiratory tract | 8.61e-08 | 54 |
rectum | 2.04e-07 | 4 |