FFCP PHASE1:Hg19::chr10:75571341..75571364,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7681 | |||
|TSSclassifier=strong | |||
|UniProt=P52849 | |||
|association_with_transcript=0bp_to_ENST00000309979_5end | |||
|description=CAGE_peak_1_at_NDST2_5end | |||
|id=chr10:75571341..75571364,- | |||
|ontology_enrichment_celltype=CL:0000738!5.38e-21!140;CL:0000037!3.30e-19!172;CL:0000566!3.30e-19!172;CL:0000988!3.43e-18!182;CL:0002032!5.19e-18!165;CL:0000837!5.19e-18!165;CL:0002087!1.39e-16!119;CL:0002031!3.67e-16!124;CL:0002057!2.17e-15!42;CL:0000766!9.96e-13!76;CL:0000860!1.10e-12!45;CL:0000763!1.56e-12!112;CL:0000049!1.56e-12!112;CL:0002009!3.09e-11!65;CL:0000557!1.61e-10!71;CL:0002194!1.71e-10!63;CL:0000576!1.71e-10!63;CL:0000040!1.71e-10!63;CL:0000559!1.71e-10!63;CL:0000839!6.64e-10!70;CL:0000791!3.31e-08!18;CL:0000789!3.31e-08!18;CL:0002420!3.31e-08!18;CL:0002419!3.31e-08!18;CL:0000790!3.31e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.73e-11;33!CL:0002057;3.73e-11;33!CL:0000576;1.37e-09;48!CL:0000473;3.91e-09;39!CL:0000234;3.91e-09;39!CL:0000791;3.92e-08;18!CL:0000789;3.92e-08;18!CL:0002419;3.92e-08;18!CL:0000766;3.30e-07;69!CL:0002087;5.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.28e-23,136;CL:0000037,7.04e-21,168;CL:0000988,4.37e-20,177;CL:0002032,1.18e-19,161;CL:0000837,1.18e-19,161;CL:0002087,1.72e-18,115;CL:0002031,5.48e-18,120;CL:0000860,2.17e-15,42;CL:0002057,2.17e-15,42;CL:0000473,5.30e-15,48;CL:0000234,5.30e-15,48;CL:0000766,7.25e-15,72;CL:0000763,3.54e-14,108;CL:0000049,3.54e-14,108;CL:0002009,2.04e-13,61;CL:0002194,1.30e-12,59;CL:0000576,1.30e-12,59;CL:0000040,1.30e-12,59;CL:0000559,1.30e-12,59;CL:0000557,1.76e-12,67;CL:0000839,8.43e-12,66;CL:0000791,3.31e-08,18;CL:0000789,3.31e-08,18;CL:0002420,3.31e-08,18;CL:0002419,3.31e-08,18;CL:0000790,3.31e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-11;42!CL:0000790;3.92e-08;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-13!115;UBERON:0002390!2.24e-13!102;UBERON:0003061!2.24e-13!102;UBERON:0002193!7.73e-13!112;UBERON:0002371!1.16e-08!80;UBERON:0002405!5.20e-08!115;UBERON:0001474!7.65e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.38e-15,98;UBERON:0003061,3.38e-15,98;UBERON:0002193,1.65e-14,108;UBERON:0007023,7.35e-14,114;UBERON:0002405,4.25e-11,93;UBERON:0002371,3.05e-10,76;UBERON:0001474,2.98e-09,82;UBERON:0004765,2.37e-07,90 | |||
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 | |||
|short_description=p1@NDST2 | |||
}} |
Revision as of 03:33, 11 January 2014
Short description: | p1@NDST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDST2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309979_5end |
EntrezGene: | NDST2 |
HGNC: | 7681 |
UniProt: | P52849 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.28e-23 | 136 |
hematopoietic stem cell | 7.04e-21 | 168 |
hematopoietic cell | 4.37e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.18e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-19 | 161 |
nongranular leukocyte | 1.72e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.48e-18 | 120 |
classical monocyte | 2.17e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-15 | 42 |
defensive cell | 5.30e-15 | 48 |
phagocyte | 5.30e-15 | 48 |
myeloid leukocyte | 7.25e-15 | 72 |
myeloid cell | 3.54e-14 | 108 |
common myeloid progenitor | 3.54e-14 | 108 |
macrophage dendritic cell progenitor | 2.04e-13 | 61 |
monopoietic cell | 1.30e-12 | 59 |
monocyte | 1.30e-12 | 59 |
monoblast | 1.30e-12 | 59 |
promonocyte | 1.30e-12 | 59 |
granulocyte monocyte progenitor cell | 1.76e-12 | 67 |
myeloid lineage restricted progenitor cell | 8.43e-12 | 66 |
mature alpha-beta T cell | 3.31e-08 | 18 |
alpha-beta T cell | 3.31e-08 | 18 |
immature T cell | 3.31e-08 | 18 |
mature T cell | 3.31e-08 | 18 |
immature alpha-beta T cell | 3.31e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.38e-15 | 98 |
blood island | 3.38e-15 | 98 |
hemolymphoid system | 1.65e-14 | 108 |
adult organism | 7.35e-14 | 114 |
immune system | 4.25e-11 | 93 |
bone marrow | 3.05e-10 | 76 |
bone element | 2.98e-09 | 82 |
skeletal element | 2.37e-07 | 90 |