FFCP PHASE1:Hg19::chr10:65281198..65281243,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23711 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000298249_5end | |||
|description=CAGE_peak_2_at_REEP3_5end | |||
|id=chr10:65281198..65281243,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.52e-14!365;UBERON:0000481!2.66e-13!347;UBERON:0000033!4.60e-13!123;UBERON:0000153!8.57e-12!129;UBERON:0007811!8.57e-12!129;UBERON:0004121!2.54e-11!169;UBERON:0000062!1.27e-10!511;UBERON:0000477!2.62e-10!286;UBERON:0000924!4.31e-10!173;UBERON:0006601!4.31e-10!173;UBERON:0000073!1.41e-09!94;UBERON:0001016!1.41e-09!94;UBERON:0000119!1.92e-09!312;UBERON:0000468!2.21e-09!659;UBERON:0000483!2.43e-09!309;UBERON:0000480!4.11e-09!626;UBERON:0000467!4.52e-09!625;UBERON:0005743!4.98e-09!86;UBERON:0004111!7.93e-09!241;UBERON:0001017!1.68e-08!82;UBERON:0001049!4.12e-08!57;UBERON:0005068!4.12e-08!57;UBERON:0006241!4.12e-08!57;UBERON:0007135!4.12e-08!57;UBERON:0003075!4.94e-08!86;UBERON:0007284!4.94e-08!86;UBERON:0004119!7.29e-08!169;UBERON:0000925!7.29e-08!169;UBERON:0006595!7.29e-08!169;UBERON:0001007!8.32e-08!155;UBERON:0001555!8.32e-08!155;UBERON:0007026!8.32e-08!155;UBERON:0000955!1.49e-07!69;UBERON:0006238!1.49e-07!69;UBERON:0002616!3.28e-07!59;UBERON:0000064!5.32e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.33e-15,223;UBERON:0004121,3.61e-10,171;UBERON:0000924,3.61e-10,171;UBERON:0006601,3.61e-10,171;UBERON:0010314,5.24e-10,132;UBERON:0000119,9.60e-10,309;UBERON:0000483,1.22e-09,306;UBERON:0003075,5.33e-09,82;UBERON:0007284,5.33e-09,82;UBERON:0001016,8.05e-09,89;UBERON:0004111,1.08e-08,240;UBERON:0004119,1.33e-08,160;UBERON:0000925,1.33e-08,160;UBERON:0006595,1.33e-08,160;UBERON:0001007,1.81e-08,145;UBERON:0001555,1.81e-08,145;UBERON:0007026,1.81e-08,145;UBERON:0001017,2.80e-08,81;UBERON:0001049,7.10e-08,56;UBERON:0005068,7.10e-08,56;UBERON:0006241,7.10e-08,56;UBERON:0007135,7.10e-08,56;UBERON:0010371,1.51e-07,104;UBERON:0002346,1.74e-07,86;UBERON:0000955,2.47e-07,68;UBERON:0006238,2.47e-07,68 | |||
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| |||
|short_description=p2@REEP3 | |||
}} |
Revision as of 03:07, 11 January 2014
Short description: | p2@REEP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REEP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000298249_5end |
EntrezGene: | REEP3 |
HGNC: | 23711 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.33e-15 | 223 |
ectoderm-derived structure | 3.61e-10 | 171 |
ectoderm | 3.61e-10 | 171 |
presumptive ectoderm | 3.61e-10 | 171 |
structure with developmental contribution from neural crest | 5.24e-10 | 132 |
cell layer | 9.60e-10 | 309 |
epithelium | 1.22e-09 | 306 |
neural plate | 5.33e-09 | 82 |
presumptive neural plate | 5.33e-09 | 82 |
nervous system | 8.05e-09 | 89 |
anatomical conduit | 1.08e-08 | 240 |
endoderm-derived structure | 1.33e-08 | 160 |
endoderm | 1.33e-08 | 160 |
presumptive endoderm | 1.33e-08 | 160 |
digestive system | 1.81e-08 | 145 |
digestive tract | 1.81e-08 | 145 |
primitive gut | 1.81e-08 | 145 |
central nervous system | 2.80e-08 | 81 |
neural tube | 7.10e-08 | 56 |
neural rod | 7.10e-08 | 56 |
future spinal cord | 7.10e-08 | 56 |
neural keel | 7.10e-08 | 56 |
ecto-epithelium | 1.51e-07 | 104 |
neurectoderm | 1.74e-07 | 86 |
brain | 2.47e-07 | 68 |
future brain | 2.47e-07 | 68 |