FFCP PHASE1:Hg19::chr10:64565719..64565736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-72bp_to_ENST00000425290_5end | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_ENST00000425290_5end | |||
|id=chr10:64565719..64565736,- | |||
|ontology_enrichment_celltype=CL:0002194!2.10e-08!63;CL:0000576!2.10e-08!63;CL:0000040!2.10e-08!63;CL:0000559!2.10e-08!63;CL:0002334!6.20e-08!12;CL:0002009!7.04e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000840;7.30e-17;5!CL:0000511;9.10e-12;1!CL:0002625;9.10e-12;1!CL:0002568;9.10e-12;1!CL:0002581;9.10e-12;1!CL:0000216;9.10e-12;1!CL:0000990;1.96e-11;8!CL:0000473;3.54e-11;39!CL:0000234;3.54e-11;39!CL:0000451;1.89e-09;10!CL:0000860;5.06e-08;33!CL:0002057;5.06e-08;33!CL:0000235;5.45e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,7.32e-17,5;CL:0001029,7.32e-17,5;CL:0002194,2.89e-16,59;CL:0000576,2.89e-16,59;CL:0000040,2.89e-16,59;CL:0000559,2.89e-16,59;CL:0002009,1.07e-15,61;CL:0000839,2.00e-14,66;CL:0000557,3.42e-14,67;CL:0000766,3.98e-13,72;CL:0002568,5.62e-12,1;CL:0000511,7.76e-12,1;CL:0002625,7.76e-12,1;CL:0000216,7.76e-12,1;CL:0002581,9.61e-12,1;CL:0000990,1.96e-11,8;CL:0000473,4.60e-10,48;CL:0000234,4.60e-10,48;CL:0000451,1.89e-09,10;CL:0002087,2.01e-09,115;CL:0002031,5.74e-09,120;CL:0000763,2.50e-08,108;CL:0000049,2.50e-08,108;CL:0000235,6.60e-08,6;CL:0000738,9.91e-08,136 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.10e-12;1!DOID:0060061;9.10e-12;1!DOID:8691;9.10e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.32e-11,1;DOID:0060061,1.32e-11,1;DOID:8691,1.32e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.62e-12;1!UBERON:0001136;9.10e-12;1!UBERON:0001343;9.10e-12;1!UBERON:0004910;9.10e-12;1!UBERON:0004813;9.10e-12;1!UBERON:0005904;1.22e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.26e-12,76;UBERON:0001301,2.63e-12,1;UBERON:0001136,7.76e-12,1;UBERON:0001343,7.76e-12,1;UBERON:0004910,7.76e-12,1;UBERON:0005154,7.76e-12,1;UBERON:0005295,7.76e-12,1;UBERON:0004813,7.76e-12,1;UBERON:0005297,7.76e-12,1;UBERON:0005294,7.76e-12,1;UBERON:0010141,7.76e-12,1;UBERON:0005891,7.76e-12,1;UBERON:0005904,1.13e-11,4;UBERON:0001474,2.23e-11,82;UBERON:0004765,2.97e-10,90;UBERON:0002405,6.99e-10,93;UBERON:0002390,2.60e-09,98;UBERON:0003061,2.60e-09,98;UBERON:0001434,4.24e-09,100;UBERON:0002193,2.50e-08,108;UBERON:0003081,4.56e-08,203 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.61130724598361,0.328402357799783,0.236132343941038,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,1.6446715520873,1.54853185447552,0.863077176966451,1.7931249457037,1.89185783910868,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0.674170453335254,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0.56738522469114,0,1.25624332628372,0,0.434377689410233,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0.196468613246569,0,0.370784442784429,8.11368484136708,9.40300581416043,5.85015026283007,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,1.2333377420858,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0.515281080091258,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.738651018262192,4.44608103764552,1.0404181360211,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,1.68053230485111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.561320188866147,0.384417447767103,0,0.482561763430822,1.48418066444991,0.154209693802656,0.532685175939381,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0,0.356128142586949,0.495854746082934,0,0.255225424989168,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0.211125408127993,0,0,0,1.63629892003448,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0.174118413160805,20.6177468525596,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0,0,0,0.407992870545287,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0.754703705257725,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0.558644917973244,0.318004350653419,0.630893960010027,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0.222462803784138,0,0,0,0,0.863710364874486,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.716697915757256,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.10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| |||
|short_description=p1@ENST00000425290 | |||
}} |
Revision as of 03:05, 11 January 2014
Short description: | p1@ENST00000425290 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000425290_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -72bp_to_ENST00000425290_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 7.32e-17 | 5 |
common dendritic progenitor | 7.32e-17 | 5 |
monopoietic cell | 2.89e-16 | 59 |
monocyte | 2.89e-16 | 59 |
monoblast | 2.89e-16 | 59 |
promonocyte | 2.89e-16 | 59 |
macrophage dendritic cell progenitor | 1.07e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.00e-14 | 66 |
granulocyte monocyte progenitor cell | 3.42e-14 | 67 |
myeloid leukocyte | 3.98e-13 | 72 |
mesenchymal stem cell of Wharton's jelly | 5.62e-12 | 1 |
androgen binding protein secreting cell | 7.76e-12 | 1 |
seminiferous tubule epithelial cell | 7.76e-12 | 1 |
Sertoli cell | 7.76e-12 | 1 |
perirenal preadipocyte | 9.61e-12 | 1 |
conventional dendritic cell | 1.96e-11 | 8 |
defensive cell | 4.60e-10 | 48 |
phagocyte | 4.60e-10 | 48 |
dendritic cell | 1.89e-09 | 10 |
nongranular leukocyte | 2.01e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 5.74e-09 | 120 |
myeloid cell | 2.50e-08 | 108 |
common myeloid progenitor | 2.50e-08 | 108 |
macrophage | 6.60e-08 | 6 |
leukocyte | 9.91e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.26e-12 | 76 |
epididymis | 2.63e-12 | 1 |
mesothelium | 7.76e-12 | 1 |
seminiferous tubule of testis | 7.76e-12 | 1 |
epithelium of male gonad | 7.76e-12 | 1 |
epithelial cord | 7.76e-12 | 1 |
sex cord | 7.76e-12 | 1 |
seminiferous tubule epithelium | 7.76e-12 | 1 |
testis sex cord | 7.76e-12 | 1 |
genital ridge | 7.76e-12 | 1 |
primitive sex cord of indifferent gonad | 7.76e-12 | 1 |
coelomic epithelium | 7.76e-12 | 1 |
duct of male reproductive system | 1.13e-11 | 4 |
bone element | 2.23e-11 | 82 |
skeletal element | 2.97e-10 | 90 |
immune system | 6.99e-10 | 93 |
hematopoietic system | 2.60e-09 | 98 |
blood island | 2.60e-09 | 98 |
skeletal system | 4.24e-09 | 100 |
hemolymphoid system | 2.50e-08 | 108 |
lateral plate mesoderm | 4.56e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.32e-11 | 1 |
cutaneous T cell lymphoma | 1.32e-11 | 1 |
mycosis fungoides | 1.32e-11 | 1 |