FFCP PHASE1:Hg19::chr10:23727926..23727957,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27346 | |||
|TSSclassifier=weak | |||
|UniProt=Q5VV17 | |||
|association_with_transcript=-240bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | |||
|coexpression_cluster_id=C1308 | |||
|description=CAGE_peak_4_at_OTUD1_5end | |||
|id=chr10:23727926..23727957,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.32e-25!140;CL:0002057!8.45e-24!42;CL:0000860!1.78e-22!45;CL:0002031!1.73e-21!124;CL:0002087!7.11e-21!119;CL:0000766!4.75e-19!76;CL:0000557!3.00e-17!71;CL:0000839!1.10e-16!70;CL:0002009!2.67e-16!65;CL:0002194!7.97e-16!63;CL:0000576!7.97e-16!63;CL:0000040!7.97e-16!63;CL:0000559!7.97e-16!63;CL:0000037!2.51e-14!172;CL:0000566!2.51e-14!172;CL:0002032!8.26e-13!165;CL:0000837!8.26e-13!165;CL:0000988!1.13e-12!182;CL:0000763!3.99e-08!112;CL:0000049!3.99e-08!112;CL:0000791!6.09e-08!18;CL:0000789!6.09e-08!18;CL:0002420!6.09e-08!18;CL:0002419!6.09e-08!18;CL:0000790!6.09e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-22;33!CL:0002057;2.55e-22;33!CL:0000576;4.35e-16;48!CL:0000473;9.53e-16;39!CL:0000234;9.53e-16;39!CL:0000766;1.24e-12;69!CL:0002087;7.68e-10;104!CL:0000791;1.02e-08;18!CL:0000789;1.02e-08;18!CL:0002419;1.02e-08;18!CL:0000738;2.26e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.95e-33,136;CL:0000860,1.50e-29,42;CL:0002057,1.50e-29,42;CL:0002031,6.12e-28,120;CL:0002087,6.40e-27,115;CL:0000473,8.18e-26,48;CL:0000234,8.18e-26,48;CL:0000766,9.64e-26,72;CL:0000557,5.43e-23,67;CL:0000839,2.96e-22,66;CL:0000037,3.01e-22,168;CL:0002009,2.04e-21,61;CL:0002194,8.02e-21,59;CL:0000576,8.02e-21,59;CL:0000040,8.02e-21,59;CL:0000559,8.02e-21,59;CL:0000988,1.41e-20,177;CL:0002032,7.15e-20,161;CL:0000837,7.15e-20,161;CL:0000763,1.29e-13,108;CL:0000049,1.29e-13,108;CL:0000791,4.46e-09,18;CL:0000789,4.46e-09,18;CL:0002420,4.46e-09,18;CL:0002419,4.46e-09,18;CL:0000790,4.46e-09,18;CL:0000838,8.94e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-21;42!CL:0000790;1.02e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-17!102;UBERON:0003061!3.99e-17!102;UBERON:0002193!1.15e-16!112;UBERON:0007023!1.32e-16!115;UBERON:0002371!1.09e-13!80;UBERON:0001474!2.20e-12!86;UBERON:0002405!1.21e-10!115;UBERON:0004765!7.96e-09!101;UBERON:0001434!7.96e-09!101;UBERON:0001049!3.80e-08!57;UBERON:0005068!3.80e-08!57;UBERON:0006241!3.80e-08!57;UBERON:0007135!3.80e-08!57;UBERON:0005743!4.42e-08!86;UBERON:0001017!6.39e-08!82;UBERON:0000073!6.82e-08!94;UBERON:0001016!6.82e-08!94;UBERON:0003080!1.40e-07!42;UBERON:0002780!2.39e-07!41;UBERON:0001890!2.39e-07!41;UBERON:0006240!2.39e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.13e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.66e-23,98;UBERON:0003061,2.66e-23,98;UBERON:0002193,6.57e-21,108;UBERON:0002371,2.07e-18,76;UBERON:0002405,2.68e-17,93;UBERON:0007023,5.93e-16,114;UBERON:0001474,6.36e-16,82;UBERON:0004765,1.46e-12,90;UBERON:0001434,2.92e-10,100;UBERON:0001049,4.12e-10,56;UBERON:0005068,4.12e-10,56;UBERON:0006241,4.12e-10,56;UBERON:0007135,4.12e-10,56;UBERON:0000073,1.77e-09,53;UBERON:0002616,1.77e-09,53;UBERON:0001017,2.65e-09,81;UBERON:0001016,7.28e-09,89;UBERON:0002780,9.73e-09,41;UBERON:0001890,9.73e-09,41;UBERON:0003080,9.73e-09,41;UBERON:0006240,9.73e-09,41;UBERON:0002346,2.08e-07,86;UBERON:0001893,2.09e-07,34;UBERON:0003528,2.42e-07,34;UBERON:0002020,2.42e-07,34;UBERON:0003081,4.34e-07,203;UBERON:0000955,4.89e-07,68;UBERON:0006238,4.89e-07,68;UBERON:0002791,7.60e-07,32;UBERON:0002619,9.27e-07,22;UBERON:0001869,9.93e-07,32 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,1.39560233594486,0.436882744260345,1.31883489114227,0.247532705920093,0.331397375727916,0,1.20538905604795,0,0.487932798790507,0,0.204000691244253,1.56727360739044,0.286235987131057,0.136874425072884,0.502170558379211,0.0764134057479513,0.0821005894499457,0,11.8009283054671,5.37361157336098,9.90823189222886,0,0,0.369754010166788,0.774672005803016,0,2.93600439334847,12.1878989877013,14.8402891127905,16.2758153036889,0.447830948479849,1.6194683300949,2.06060454107349,4.65274364094607,6.80176698639857,1.4555043671269,14.8754583619638,11.5127008646111,15.1756121738601,22.7276989934499,11.5272317938095,17.0267205519781,32.4060939892421,29.692295444856,23.0225027210381,10.9180556934711,4.91231070104122,6.51698104890745,21.4258724659632,13.4790191371959,19.1801137739712,7.91643120448119,4.78712778291916,3.83602275479425,20.0244374653723,17.5889419654253,18.0618452208717,30.6523371613227,20.3378338183879,15.8547856634735,12.7133895553007,16.940771255428,12.6584954976354,3.80259515361495,3.4016687994407,3.56419697364239,1.34794357375794,3.75442232103766,2.08943262706204,2.85012743741249,2.78483348078726,2.00930569141097,8.79981222306614,1.09227722252426,4.44754626931777,3.41384178053206,5.60554381850417,1.72425731986345,7.27149360063348,3.81621501814146,22.7685187643779,7.04684627245127,9.55683070313072,1.32171328579026,3.36305137788922,1.31692042387539,9.44206896546399,8.64623678048162,9.66327045297693,1.83905144929746,7.82213439920617,10.4158517261641,0,1.22551502573691,6.77593587192126,3.76607620792156,3.79125409271022,1.0247305578054,1.04047478047903,1.64437904603676,0.829050053357545,3.18783394308558,8.30404753707538,9.89901063931938,6.27213142829861,0.566546713487831,4.59864592322305,7.21617635513523,4.80737414837055,1.91139248594458,1.95325036156926,2.85135613334512,2.10805166708882,2.94369205655162,1.24930726552346,2.60454977248419,4.10563998460523,7.4594494993151,5.34880391567015,9.12393744461634,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.579386075843295,0,0,0.189069634328136,0,0.43917392846563,3.47094550068939,1.82147644146271,0.741568885568859,1.29818957461873,1.0447784237956,0.664789802594326,3.81584998888547,5.14795419702115,2.22874500797739,0.39752481473341,0,0.694281003215189,0.56530794192401,0.838998872419812,0.550236083880135,0.417989933073621,0.516833518338658,0.71153252537342,1.33888245105868,1.20848795132744,0,1.46437234528902,0.367663080345869,1.62028389576352,0.625098097988558,0.44905874525234,0.225222960966644,0,0,0.366403487860815,1.31780417436063,15.511210565933,1.74437620857014,0.496971951695318,0.633152558322899,0.397227542439656,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.942974704487816,0.163461903113459,0.605429710579726,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0.323745888736263,0,0.204154171254893,0,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0.554128230968366,0.438977620880838,0,0.300476117813194,0.453728732640084,0.717558542755448,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.710019185033229,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.975789649036763,1.06023814657188,1.2781333715647,1.34759371519982,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.505754070234305,0.482022059766964,0.55146986366197,0,0,0.539325232640658,0.588664395376038,0,2.21446636387394,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.860919069801795,0.686271241194102,0.109750285408626,0,0.502644862058154,0.925884451585296,0,0,0,0.463721619900307,0.469634776943287,1.01056513432752,0.925971025153221,1.33177906564219,1.58040879591855,0.858486162094873,0.738651018262192,0.234004265139238,0.594524649154913,0.93733833986777,0,0,0.447792613514241,0,0.383382679165211,0,1.76096868026452,5.59785911960085,9.80015683235338,8.45824303956746,0.317489471460845,0.381988425558278,1.17217447210047,1.71072446022705,0.411309970813294,0.600686115687835,0.857479297891735,0.560655421726804,0,0.22001485746285,0.517086863031111,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.428933980974443,0,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0.871533458600294,1.09970290300263,0,3.01354254859276,2.10833939483032,0,1.14861935834114,0,0,0.821905290201534,0.358121926479791,0.672510863961164,5.71389204585589,6.46882724578552,7.18721003166591,0.508189248444927,3.90419561572865,1.54657762555539,1.17261385734044,3.82763250991898,6.74106321552464,0,5.38740167466846,0.613457458595699,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.468565659970853,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,1.37060810223918,0.686286847621712,5.37596867919507,6.90285442619574,9.07184241329277,1.81876542867756,1.66435439510497,2.11673205330776,0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| |||
|short_description=p4@OTUD1 | |||
}} |
Revision as of 02:10, 11 January 2014
Short description: | p4@OTUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OTUD1_5end |
Coexpression cluster: | C1308_CD14_CD4_Basophils_Peripheral_Neutrophils_Eosinophils_CD8 |
Association with transcript: | -240bp_to_ENST00000376495, NM_001145373, uc001irr.1_5end |
EntrezGene: | OTUD1 |
HGNC: | 27346 |
UniProt: | Q5VV17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.95e-33 | 136 |
classical monocyte | 1.50e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-29 | 42 |
hematopoietic lineage restricted progenitor cell | 6.12e-28 | 120 |
nongranular leukocyte | 6.40e-27 | 115 |
defensive cell | 8.18e-26 | 48 |
phagocyte | 8.18e-26 | 48 |
myeloid leukocyte | 9.64e-26 | 72 |
granulocyte monocyte progenitor cell | 5.43e-23 | 67 |
myeloid lineage restricted progenitor cell | 2.96e-22 | 66 |
hematopoietic stem cell | 3.01e-22 | 168 |
macrophage dendritic cell progenitor | 2.04e-21 | 61 |
monopoietic cell | 8.02e-21 | 59 |
monocyte | 8.02e-21 | 59 |
monoblast | 8.02e-21 | 59 |
promonocyte | 8.02e-21 | 59 |
hematopoietic cell | 1.41e-20 | 177 |
hematopoietic oligopotent progenitor cell | 7.15e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.15e-20 | 161 |
myeloid cell | 1.29e-13 | 108 |
common myeloid progenitor | 1.29e-13 | 108 |
mature alpha-beta T cell | 4.46e-09 | 18 |
alpha-beta T cell | 4.46e-09 | 18 |
immature T cell | 4.46e-09 | 18 |
mature T cell | 4.46e-09 | 18 |
immature alpha-beta T cell | 4.46e-09 | 18 |
lymphoid lineage restricted progenitor cell | 8.94e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.66e-23 | 98 |
blood island | 2.66e-23 | 98 |
hemolymphoid system | 6.57e-21 | 108 |
bone marrow | 2.07e-18 | 76 |
immune system | 2.68e-17 | 93 |
adult organism | 5.93e-16 | 114 |
bone element | 6.36e-16 | 82 |
skeletal element | 1.46e-12 | 90 |
skeletal system | 2.92e-10 | 100 |
neural tube | 4.12e-10 | 56 |
neural rod | 4.12e-10 | 56 |
future spinal cord | 4.12e-10 | 56 |
neural keel | 4.12e-10 | 56 |
regional part of nervous system | 1.77e-09 | 53 |
regional part of brain | 1.77e-09 | 53 |
central nervous system | 2.65e-09 | 81 |
nervous system | 7.28e-09 | 89 |
regional part of forebrain | 9.73e-09 | 41 |
forebrain | 9.73e-09 | 41 |
anterior neural tube | 9.73e-09 | 41 |
future forebrain | 9.73e-09 | 41 |
neurectoderm | 2.08e-07 | 86 |
telencephalon | 2.09e-07 | 34 |
brain grey matter | 2.42e-07 | 34 |
gray matter | 2.42e-07 | 34 |
lateral plate mesoderm | 4.34e-07 | 203 |
brain | 4.89e-07 | 68 |
future brain | 4.89e-07 | 68 |
regional part of telencephalon | 7.60e-07 | 32 |
regional part of cerebral cortex | 9.27e-07 | 22 |
cerebral hemisphere | 9.93e-07 | 32 |