FFCP PHASE1:Hg19::chr10:22540860..22540869,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr10:22540860..22540869,- | |||
|id=chr10:22540860..22540869,- | |||
|ontology_enrichment_celltype=CL:0002057!3.00e-48!42;CL:0000860!1.05e-44!45;CL:0002194!5.57e-30!63;CL:0000576!5.57e-30!63;CL:0000040!5.57e-30!63;CL:0000559!5.57e-30!63;CL:0000839!1.75e-29!70;CL:0000557!5.28e-29!71;CL:0002009!6.34e-29!65;CL:0000766!8.68e-27!76;CL:0002031!2.08e-23!124;CL:0002087!1.65e-22!119;CL:0000763!4.29e-22!112;CL:0000049!4.29e-22!112;CL:0002032!1.13e-20!165;CL:0000837!1.13e-20!165;CL:0000738!4.60e-20!140;CL:0000037!1.43e-19!172;CL:0000566!1.43e-19!172;CL:0000988!3.83e-18!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.45e-24;33!CL:0002057;6.45e-24;33!CL:0000473;1.50e-18;39!CL:0000234;1.50e-18;39!CL:0000766;6.96e-12;69!CL:0000576;9.80e-09;48!CL:0000097;5.35e-08;5!CL:0000763;4.80e-07;100!CL:0002087;7.88e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.03e-20,42;CL:0002057,5.03e-20,42;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000473,1.36e-17,48;CL:0000234,1.36e-17,48;CL:0000766,1.10e-16,72;CL:0002194,3.50e-14,59;CL:0000576,3.50e-14,59;CL:0000040,3.50e-14,59;CL:0000559,3.50e-14,59;CL:0002009,9.68e-14,61;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0000097,5.35e-08,5;CL:0002028,5.35e-08,5;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0002087,1.55e-07,115;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.26e-25!80;UBERON:0001474!4.02e-23!86;UBERON:0002390!8.31e-23!102;UBERON:0003061!8.31e-23!102;UBERON:0002193!2.66e-20!112;UBERON:0004765!5.65e-19!101;UBERON:0001434!5.65e-19!101;UBERON:0002405!8.43e-18!115;UBERON:0002204!1.43e-09!167;UBERON:0003081!5.27e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,3.10271112662957,1.93645405075148,0,0,0.272906150057846,0.449446968890169,3.36692281607993,2.24650318953266,5.11469700639233,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8385912337108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:22540860..22540869,- | |||
}} |
Revision as of 02:07, 11 January 2014
Short description: | p@chr10:22540860..22540869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22540860..22540869, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.03e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.03e-20 | 42 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
defensive cell | 1.36e-17 | 48 |
phagocyte | 1.36e-17 | 48 |
myeloid leukocyte | 1.10e-16 | 72 |
monopoietic cell | 3.50e-14 | 59 |
monocyte | 3.50e-14 | 59 |
monoblast | 3.50e-14 | 59 |
promonocyte | 3.50e-14 | 59 |
macrophage dendritic cell progenitor | 9.68e-14 | 61 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
mast cell | 5.35e-08 | 5 |
basophil mast progenitor cell | 5.35e-08 | 5 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
nongranular leukocyte | 1.55e-07 | 115 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |