FFCP PHASE1:Hg19::chr10:12237924..12237982,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16827 | |||
|TSSclassifier=strong | |||
|UniProt=O75794 | |||
|association_with_transcript=0bp_to_ENST00000281141,ENST00000429258,NM_006023,uc001ill.2,uc001ilm.2,uc009xja.2_5end | |||
|description=CAGE_peak_2_at_CDC123_5end | |||
|id=chr10:12237924..12237982,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.16e-14!682;CL:0002139!7.26e-14!24;CL:0000548!6.93e-13!679;CL:0000004!6.93e-13!679;CL:0000255!6.93e-13!679;CL:0000003!9.77e-13!722;CL:0000063!5.83e-12!578;CL:0000144!7.20e-12!625;CL:0000115!1.16e-10!35;CL:0000037!4.90e-10!172;CL:0000566!4.90e-10!172;CL:0000071!6.21e-10!18;CL:0002546!6.21e-10!18;CL:0000945!1.00e-09!24;CL:0000826!1.00e-09!24;CL:0000213!1.41e-09!57;CL:0000215!1.41e-09!57;CL:0000988!1.48e-09!182;CL:0002032!3.62e-09!165;CL:0000837!3.62e-09!165;CL:0002078!1.17e-08!44;CL:0002371!1.60e-08!591;CL:0000236!6.21e-08!14;CL:0000034!2.53e-07!444;CL:0000838!4.30e-07!52;CL:0000542!5.64e-07!53;CL:0000051!5.64e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.01e-14;24!CL:0000115;2.75e-10;36!CL:0000071;4.41e-10;18!CL:0000945;1.12e-09;24!CL:0000236;1.02e-07;13!CL:0002078;5.69e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.06e-14,24;CL:0000115,1.94e-11,36;CL:0000213,2.53e-10,58;CL:0000215,2.53e-10,58;CL:0000037,3.14e-10,168;CL:0000071,5.49e-10,18;CL:0002546,5.49e-10,18;CL:0000945,8.90e-10,24;CL:0000826,8.90e-10,24;CL:0000988,1.95e-09,177;CL:0002078,2.23e-09,45;CL:0002032,2.39e-09,161;CL:0000837,2.39e-09,161;CL:0000236,5.65e-08,14;CL:0000034,4.31e-07,441;CL:0000838,5.39e-07,52;CL:0000542,7.03e-07,53;CL:0000051,7.03e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002546;4.41e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!1.79e-10!51;DOID:0060083!1.79e-10!51;DOID:8692!2.03e-10!31;DOID:1240!5.95e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.19e-10;31!DOID:1240;2.95e-08;39!DOID:2531;9.48e-07;51!DOID:0060083;9.48e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.10e-10,51;DOID:0060083,1.10e-10,51;DOID:8692,1.78e-10,31;DOID:1240,5.54e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0001986!6.21e-10!18;UBERON:0004638!6.21e-10!18;UBERON:0004852!6.21e-10!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.41e-10;18!UBERON:0001986;4.41e-10;18!UBERON:0004852;4.41e-10;18!UBERON:0000487;4.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.49e-10,18;UBERON:0001986,5.49e-10,18;UBERON:0004852,5.49e-10,18 | |||
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| |||
|short_description=p2@CDC123 | |||
}} |
Revision as of 01:44, 11 January 2014
Short description: | p2@CDC123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC123_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000281141, ENST00000429258, NM_006023, uc001ill.2, uc001ilm.2, uc009xja.2_5end |
EntrezGene: | CDC123 |
HGNC: | 16827 |
UniProt: | O75794 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.06e-14 | 24 |
endothelial cell | 1.94e-11 | 36 |
lining cell | 2.53e-10 | 58 |
barrier cell | 2.53e-10 | 58 |
hematopoietic stem cell | 3.14e-10 | 168 |
blood vessel endothelial cell | 5.49e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.49e-10 | 18 |
lymphocyte of B lineage | 8.90e-10 | 24 |
pro-B cell | 8.90e-10 | 24 |
hematopoietic cell | 1.95e-09 | 177 |
meso-epithelial cell | 2.23e-09 | 45 |
hematopoietic oligopotent progenitor cell | 2.39e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-09 | 161 |
B cell | 5.65e-08 | 14 |
stem cell | 4.31e-07 | 441 |
lymphoid lineage restricted progenitor cell | 5.39e-07 | 52 |
lymphocyte | 7.03e-07 | 53 |
common lymphoid progenitor | 7.03e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.49e-10 | 18 |
endothelium | 5.49e-10 | 18 |
cardiovascular system endothelium | 5.49e-10 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.10e-10 | 51 |
immune system cancer | 1.10e-10 | 51 |
myeloid leukemia | 1.78e-10 | 31 |
leukemia | 5.54e-10 | 39 |