FFCP PHASE1:Hg19::chr10:5535686..5535697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr10:5535686..5535697,- | |||
|id=chr10:5535686..5535697,- | |||
|ontology_enrichment_celltype=CL:0002541!2.30e-17!3;CL:0000039!4.89e-17!7;CL:0000586!4.89e-17!7;CL:0002563!3.02e-13!4;CL:0002253!2.12e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.98e-22;7!CL:0000586;2.98e-22;7!CL:0002541;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.99e-22,7;CL:0000586,2.99e-22,7;CL:0002541,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.03e-17;1!UBERON:0008425;1.03e-17;1 | |||
|ontology_enrichment_disease=DOID:5093!8.10e-50!4;DOID:1612!8.10e-50!4;DOID:1799!3.98e-14!1;DOID:10165!3.98e-14!1;DOID:1798!3.98e-14!1;DOID:299!3.42e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.34e-37;4!DOID:1612;1.34e-37;4!DOID:1799;4.08e-18;1!DOID:10165;4.08e-18;1!DOID:1798;4.08e-18;1!DOID:3095;1.70e-07;22!DOID:2994;1.70e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.26e-37,4;DOID:1612,1.26e-37,4;DOID:1799,3.75e-18,1;DOID:10165,3.75e-18,1;DOID:1798,3.75e-18,1;DOID:3095,1.70e-07,22;DOID:2994,1.70e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000310!3.43e-20!10;UBERON:0001443!2.18e-18!11;UBERON:0000476!2.30e-17!3;UBERON:0000920!2.30e-17!3;UBERON:0003124!1.51e-16!7;UBERON:0001242!3.02e-13!4;UBERON:0001262!3.02e-13!4;UBERON:0004786!3.02e-13!4;UBERON:0004808!3.02e-13!4;UBERON:0001277!3.02e-13!4;UBERON:0003350!8.71e-11!5;UBERON:0005631!1.45e-08!14;UBERON:0000158!1.45e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.69e-15;10!UBERON:0001443;3.77e-14;11!UBERON:0003124;9.11e-07;3!UBERON:0000920;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.65e-15,10;UBERON:0001443,3.69e-14,11;UBERON:0003124,1.94e-10,7;UBERON:0000920,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6876996995342,1.48681999993533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14748103602986,10.4118867515336,3.04212641381623,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97622719514703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68534503309014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:5535686..5535697,- | |||
}} |
Revision as of 01:32, 11 January 2014
Short description: | p@chr10:5535686..5535697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535686..5535697, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.99e-22 | 7 |
germ cell | 2.99e-22 | 7 |
chorionic membrane mesenchymal stem cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 1.65e-15 | 10 |
chest | 3.69e-14 | 11 |
chorion | 1.94e-10 | 7 |
egg chorion | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.26e-37 | 4 |
breast cancer | 1.26e-37 | 4 |
islet cell tumor | 3.75e-18 | 1 |
endocrine pancreas cancer | 3.75e-18 | 1 |
pancreatic endocrine carcinoma | 3.75e-18 | 1 |
germ cell and embryonal cancer | 1.70e-07 | 22 |
germ cell cancer | 1.70e-07 | 22 |