FFCP PHASE1:Hg19::chr10:4828859..4828883,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=83592 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23437 | |||
|TSSclassifier=weak | |||
|UniProt=E9PK93 | |||
|association_with_transcript=38bp_to_ENST00000533295_5end | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_6_at_AKR1E2_5end | |||
|id=chr10:4828859..4828883,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000083;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.40e-08;3!UBERON:0003353;1.40e-08;3!UBERON:0008947;1.86e-07;29!UBERON:0001041;3.16e-07;30 | |||
|ontology_enrichment_disease=DOID:4074!3.82e-08!2;DOID:4905!3.82e-08!2;DOID:3498!3.82e-08!2;DOID:3905!6.79e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.65e-12;2!DOID:4905;1.65e-12;2!DOID:3498;1.65e-12;2!DOID:3905;9.23e-11;9!DOID:4556;1.17e-08;3!DOID:3119;2.68e-07;14!DOID:1793;6.87e-07;4!DOID:1324;8.09e-07;15!DOID:5409;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.65e-12,2;DOID:4905,1.65e-12,2;DOID:3498,1.65e-12,2;DOID:3905,9.23e-11,9;DOID:4556,1.12e-08,3;DOID:3119,2.68e-07,14;DOID:1793,6.87e-07,4;DOID:1324,8.09e-07,15;DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002171!1.23e-14!1;UBERON:0006518!1.23e-14!1;UBERON:0008949!1.23e-14!1;UBERON:0000101!1.23e-14!1;UBERON:0002167!1.23e-14!1;UBERON:0002048!5.70e-10!22;UBERON:0000117!5.70e-10!22;UBERON:0000171!5.70e-10!22;UBERON:0000170!5.70e-10!22;UBERON:0005597!5.70e-10!22;UBERON:0000118!5.70e-10!22;UBERON:0005157!4.72e-09!51;UBERON:0005153!5.78e-09!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.13e-23;1!UBERON:0006518;5.13e-23;1!UBERON:0008949;5.13e-23;1!UBERON:0000101;5.13e-23;1!UBERON:0002167;5.13e-23;1!UBERON:0002048;1.23e-09;22!UBERON:0000117;1.23e-09;22!UBERON:0000171;1.23e-09;22!UBERON:0000170;1.23e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.13e-23,1;UBERON:0006518,5.13e-23,1;UBERON:0008949,5.13e-23,1;UBERON:0000101,5.13e-23,1;UBERON:0002167,5.13e-23,1;UBERON:0005153,7.42e-10,37;UBERON:0002048,1.23e-09,22;UBERON:0000117,1.23e-09,22;UBERON:0000171,1.23e-09,22;UBERON:0000170,1.23e-09,22;UBERON:0005597,1.23e-09,22;UBERON:0000118,1.23e-09,22;UBERON:0005157,7.82e-08,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29011533458136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0063790920116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.880976635762,0,0,72.5634807702126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69601177817923,0,0,0,0,1.77987976358325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09192236021678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@AKR1E2 | |||
}} |
Revision as of 01:30, 11 January 2014
Short description: | p6@AKR1E2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_6_at_AKR1E2_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | 38bp_to_ENST00000533295_5end |
EntrezGene: | AKR1E2 |
HGNC: | 23437 |
UniProt: | E9PK93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.13e-23 | 1 |
right lung lobe | 5.13e-23 | 1 |
lower lobe of lung | 5.13e-23 | 1 |
lobe of lung | 5.13e-23 | 1 |
right lung | 5.13e-23 | 1 |
epithelial bud | 7.42e-10 | 37 |
lung | 1.23e-09 | 22 |
respiratory tube | 1.23e-09 | 22 |
respiration organ | 1.23e-09 | 22 |
pair of lungs | 1.23e-09 | 22 |
lung primordium | 1.23e-09 | 22 |
lung bud | 1.23e-09 | 22 |
epithelial fold | 7.82e-08 | 47 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.65e-12 | 2 |
pancreatic carcinoma | 1.65e-12 | 2 |
pancreatic ductal adenocarcinoma | 1.65e-12 | 2 |
lung carcinoma | 9.23e-11 | 9 |
lung large cell carcinoma | 1.12e-08 | 3 |
gastrointestinal system cancer | 2.68e-07 | 14 |
pancreatic cancer | 6.87e-07 | 4 |
lung cancer | 8.09e-07 | 15 |
lung small cell carcinoma | 8.61e-07 | 4 |