FFCP PHASE1:Hg19::chr10:3824125..3824146,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2235 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENST00000173785_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_12_at_KLF6_5end | |||
|id=chr10:3824125..3824146,- | |||
|ontology_enrichment_celltype=CL:0002057!6.56e-23!42;CL:0000860!3.84e-20!45;CL:0000766!2.18e-18!76;CL:0000738!2.36e-17!140;CL:0000557!3.43e-17!71;CL:0002009!6.51e-16!65;CL:0000839!9.57e-16!70;CL:0002194!5.40e-15!63;CL:0000576!5.40e-15!63;CL:0000040!5.40e-15!63;CL:0000559!5.40e-15!63;CL:0002031!9.87e-15!124;CL:0002087!2.69e-13!119;CL:0002032!5.74e-11!165;CL:0000837!5.74e-11!165;CL:0000763!8.07e-11!112;CL:0000049!8.07e-11!112;CL:0000037!1.48e-10!172;CL:0000566!1.48e-10!172;CL:0000988!5.37e-09!182;CL:0000134!6.73e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000766;4.38e-15;69!CL:0000473;8.22e-14;39!CL:0000234;8.22e-14;39!CL:0000860;7.10e-13;33!CL:0002057;7.10e-13;33!CL:0000097;2.67e-09;5!CL:0000094;3.34e-09;8!CL:0000576;3.57e-09;48!CL:0000775;2.96e-07;3!CL:0002393;3.70e-07;6!CL:0002397;3.70e-07;6!CL:0000763;8.03e-07;100!CL:0000738;9.59e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.12e-27,72;CL:0000738,1.79e-22,136;CL:0000557,9.70e-22,67;CL:0000473,5.75e-20,48;CL:0000234,5.75e-20,48;CL:0000839,1.06e-19,66;CL:0002031,8.55e-19,120;CL:0000763,4.24e-18,108;CL:0000049,4.24e-18,108;CL:0002032,6.20e-18,161;CL:0000837,6.20e-18,161;CL:0000860,1.67e-17,42;CL:0002057,1.67e-17,42;CL:0000037,6.64e-17,168;CL:0002009,8.74e-17,61;CL:0000988,1.06e-15,177;CL:0002194,3.10e-15,59;CL:0000576,3.10e-15,59;CL:0000040,3.10e-15,59;CL:0000559,3.10e-15,59;CL:0002087,3.75e-13,115;CL:0000097,2.68e-09,5;CL:0002028,2.68e-09,5;CL:0000094,2.98e-09,8;CL:0000775,2.59e-07,3;CL:0000081,9.81e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.95e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.47e-13!80;UBERON:0001474!1.69e-12!86;UBERON:0004765!5.27e-11!101;UBERON:0001434!5.27e-11!101;UBERON:0002390!5.50e-10!102;UBERON:0003061!5.50e-10!102;UBERON:0002193!7.22e-10!112;UBERON:0002405!1.19e-09!115;UBERON:0002204!2.77e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.45e-09;2!UBERON:0001630;1.45e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.23e-18,76;UBERON:0001474,6.03e-17,82;UBERON:0004765,4.85e-15,90;UBERON:0002405,2.07e-14,93;UBERON:0002390,1.91e-13,98;UBERON:0003061,1.91e-13,98;UBERON:0001434,4.35e-13,100;UBERON:0002193,8.69e-12,108;UBERON:0005090,8.22e-10,2;UBERON:0001630,8.22e-10,2;UBERON:0002204,1.08e-08,167 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0.0821005894499457,0.0787107813136792,1.57345710739562,0.767658796194425,1.08371286321253,1.83884244895785,0,0,0,0,0,1.66198622559563,2.4065333696417,1.73608696572681,0,0.647787332037959,0,0.581592955118259,0.755751887377619,0.485168122375632,0.697287110717054,0.822335776043652,0.619412741790207,0.863077176966451,1.0246428261164,0.47296445977717,4.13694816883942,1.29096936716765,2.70852973188684,0.376484679085209,0.545812300115692,0.224723484445085,2.44867113896722,1.28371610830437,1.27867425159808,0.989553900560148,0.598390972864896,1.27867425159808,0.870627715885752,0,1.24564449799115,1.25624332628372,2.08593167368081,0.434377689410233,0.605399502633369,0.736555271975129,0.949387162322653,0.633765858935825,0.637812899895131,0,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0,1.14681968437569,1.32171328579026,0,0,1.96709770113833,2.75107533924415,0.822405995998037,0.167186495390678,0,0.473447805734733,0,0,0,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0.339928028092699,0.383220493601921,1.03088233644789,1.01207876807801,0,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,1.18800285728205,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.671928512795438,0,0,0,0,0,0.264145302039678,16.378921127721,12.3943159938587,18.5576377136779,0.063497894292169,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,2.00902836572851,2.10833939483032,0,0,0,0.144781306667579,0.410952645100767,0,0,0.591092280605782,0.862510299438069,1.02674429023799,0,0,0,0.335032530668698,0,0,2.99161459204025,7.45947924184864,0,0,0,0.415941723061614,0.178428988797162,0,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.604297247958111,2.20557117333613,0.828728900423067,0,0,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0.661139661443912,0.576570202095319,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.845086807596724,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.591860433821602,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.113942055847001,0.23056390438806,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,3.0952078182318,0,0,0.315222829196793,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,1.10043013569766,0.828478110694391,0.496166021811951,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0.302461847526478,0,0.443565449968902,0,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,0.796191777397232,0.400027764663154,0,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.779441235357554,0.797189041880179,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.591424344868181,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0,0,0,0.116241425368125,0,0,0.414432328326074,0.51215543128185,0,0,0.118332000730565,0,0,0,0.62041277132864,0,0.111855431797792,0.098150233615243,0,1.29485767437579,0.307988420568741,0,1.94284397223656,0,0,0,0,0,0.150962843566674,1.08043821351123,0.218559560503957,0,0.490296643507811,0,0.588925401344836,0,0.4226557275834,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,1.08858373948481,0.342233301085281,0.202056159043763,0.358611026963382,0,0,0.213454691755431,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p12@KLF6 | |||
}} |
Revision as of 01:24, 11 January 2014
Short description: | p12@KLF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KLF6_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 96bp_to_ENST00000173785_5end |
EntrezGene: | KLF6 |
HGNC: | 2235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.12e-27 | 72 |
leukocyte | 1.79e-22 | 136 |
granulocyte monocyte progenitor cell | 9.70e-22 | 67 |
defensive cell | 5.75e-20 | 48 |
phagocyte | 5.75e-20 | 48 |
myeloid lineage restricted progenitor cell | 1.06e-19 | 66 |
hematopoietic lineage restricted progenitor cell | 8.55e-19 | 120 |
myeloid cell | 4.24e-18 | 108 |
common myeloid progenitor | 4.24e-18 | 108 |
hematopoietic oligopotent progenitor cell | 6.20e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.20e-18 | 161 |
classical monocyte | 1.67e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.67e-17 | 42 |
hematopoietic stem cell | 6.64e-17 | 168 |
macrophage dendritic cell progenitor | 8.74e-17 | 61 |
hematopoietic cell | 1.06e-15 | 177 |
monopoietic cell | 3.10e-15 | 59 |
monocyte | 3.10e-15 | 59 |
monoblast | 3.10e-15 | 59 |
promonocyte | 3.10e-15 | 59 |
nongranular leukocyte | 3.75e-13 | 115 |
mast cell | 2.68e-09 | 5 |
basophil mast progenitor cell | 2.68e-09 | 5 |
granulocyte | 2.98e-09 | 8 |
neutrophil | 2.59e-07 | 3 |
blood cell | 9.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.23e-18 | 76 |
bone element | 6.03e-17 | 82 |
skeletal element | 4.85e-15 | 90 |
immune system | 2.07e-14 | 93 |
hematopoietic system | 1.91e-13 | 98 |
blood island | 1.91e-13 | 98 |
skeletal system | 4.35e-13 | 100 |
hemolymphoid system | 8.69e-12 | 108 |
muscle structure | 8.22e-10 | 2 |
muscle organ | 8.22e-10 | 2 |
musculoskeletal system | 1.08e-08 | 167 |