FFCP PHASE1:Hg19::chr1:235490580..235490602,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4249 | |||
|TSSclassifier=strong | |||
|UniProt=O95749 | |||
|association_with_transcript=-62bp_to_ENST00000488594_5end | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_10_at_GGPS1_5end | |||
|id=chr1:235490580..235490602,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.24e-45!140;CL:0002057!1.04e-39!42;CL:0000766!1.49e-38!76;CL:0000037!2.94e-38!172;CL:0000566!2.94e-38!172;CL:0000988!4.91e-38!182;CL:0000860!1.77e-36!45;CL:0002032!3.35e-34!165;CL:0000837!3.35e-34!165;CL:0002031!2.12e-33!124;CL:0002087!4.48e-32!119;CL:0000557!2.00e-30!71;CL:0000763!1.34e-28!112;CL:0000049!1.34e-28!112;CL:0002009!6.22e-28!65;CL:0000839!6.92e-27!70;CL:0002194!6.10e-25!63;CL:0000576!6.10e-25!63;CL:0000040!6.10e-25!63;CL:0000559!6.10e-25!63;CL:0000094!1.04e-14!8;CL:0002393!3.26e-12!9;CL:0002397!3.26e-12!9;CL:0000134!4.84e-12!358;CL:0002320!1.66e-11!365;CL:0000081!2.36e-10!11;CL:0000219!1.22e-09!390;CL:0000080!3.29e-09!6;CL:0000623!5.36e-09!3;CL:0000825!5.36e-09!3;CL:0000048!1.65e-08!430;CL:0000034!2.68e-08!444;CL:0000723!3.54e-08!436;CL:0000842!7.71e-08!3;CL:0000767!7.89e-08!3;CL:0000624!4.18e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.67e-27;3!CL:0000771;5.61e-19;2!CL:0000791;3.47e-17;18!CL:0000789;3.47e-17;18!CL:0002419;3.47e-17;18!CL:0000624;8.70e-14;6!CL:0002393;1.06e-13;6!CL:0002397;1.06e-13;6!CL:0000084;2.97e-12;25!CL:0000094;1.70e-10;8!CL:0002087;6.76e-10;104!CL:0000576;1.02e-08;48!CL:0000542;1.19e-08;53!CL:0000860;8.07e-08;33!CL:0002057;8.07e-08;33!CL:0000625;8.62e-08;11!CL:0000081;9.14e-08;11!CL:0000738;5.47e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.22e-27,3;CL:0000825,1.22e-27,3;CL:0000738,1.82e-27,136;CL:0002087,6.40e-24,115;CL:0002031,8.33e-23,120;CL:0002032,9.90e-23,161;CL:0000837,9.90e-23,161;CL:0000037,1.18e-21,168;CL:0000988,2.15e-20,177;CL:0000771,4.91e-19,2;CL:0000791,3.37e-17,18;CL:0000789,3.37e-17,18;CL:0002420,3.37e-17,18;CL:0002419,3.37e-17,18;CL:0000790,3.37e-17,18;CL:0000838,1.95e-15,52;CL:0000860,3.71e-15,42;CL:0002057,3.71e-15,42;CL:0000542,4.08e-15,53;CL:0000051,4.08e-15,53;CL:0000766,5.92e-15,72;CL:0000624,8.33e-14,6;CL:0000473,4.16e-13,48;CL:0000234,4.16e-13,48;CL:0000084,2.92e-12,25;CL:0000827,2.92e-12,25;CL:0000094,1.57e-10,8;CL:0002194,3.10e-10,59;CL:0000576,3.10e-10,59;CL:0000040,3.10e-10,59;CL:0000559,3.10e-10,59;CL:0002009,7.28e-10,61;CL:0000763,2.31e-09,108;CL:0000049,2.31e-09,108;CL:0002393,2.87e-09,9;CL:0002397,2.87e-09,9;CL:0000839,4.92e-09,66;CL:0000557,6.98e-09,67;CL:0000134,1.63e-08,354;CL:0002320,2.79e-08,361;CL:0000081,8.63e-08,11;CL:0000625,8.63e-08,11;CL:0000219,1.87e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;3.47e-17;18!CL:0002057;3.58e-11;42!CL:0000051;1.19e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.98e-30!102;UBERON:0003061!3.98e-30!102;UBERON:0002193!6.00e-28!112;UBERON:0002371!1.09e-27!80;UBERON:0001474!4.57e-25!86;UBERON:0004765!3.36e-21!101;UBERON:0001434!3.36e-21!101;UBERON:0002405!1.28e-18!115;UBERON:0002384!8.81e-11!375;UBERON:0003081!1.09e-09!216;UBERON:0002204!4.38e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.82e-08,371;UBERON:0002371,1.07e-07,76;UBERON:0001474,4.75e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0.293600439334847,2.21598163412751,3.00816671205213,2.60413044859022,0,0,0,0,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.449446968890169,0.306083892370903,0.641858054152187,3.83602275479425,0.329851300186716,0.199463657621632,0,1.16083695451434,0.56738522469114,1.24564449799115,0.251248665256743,1.0429658368404,0.217188844705117,1.21079900526674,1.10483290796269,0.316462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,1.52909291250092,0,0.560508562981536,0,1.57367816091066,3.53709686474248,5.34563897398724,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,1.71813722741315,0.506039384039006,0,0,0,0,0,0,0,0,3.62892137804518,2.67440195783507,4.05508330871837,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,10.5424333948851,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94061520403854,4.52817907204986,5.90377966886842,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.74709290462411,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@GGPS1 | |||
}} |
Revision as of 00:51, 11 January 2014
Short description: | p10@GGPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GGPS1_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | -62bp_to_ENST00000488594_5end |
EntrezGene: | GGPS1 |
HGNC: | 4249 |
UniProt: | O95749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.82e-08 | 371 |
bone marrow | 1.07e-07 | 76 |
bone element | 4.75e-07 | 82 |