FFCP PHASE1:Hg19::chr1:234743771..234743791,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=359948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21729 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=48bp_to_ENST00000491430_5end | |||
|coexpression_cluster_id=C3952 | |||
|description=CAGE_peak_10_at_IRF2BP2_5end | |||
|id=chr1:234743771..234743791,- | |||
|ontology_enrichment_celltype=CL:0002057!2.66e-18!42;CL:0000860!1.29e-16!45;CL:0000766!6.38e-16!76;CL:0000557!8.82e-14!71;CL:0000839!3.97e-12!70;CL:0002009!3.81e-11!65;CL:0000738!6.12e-11!140;CL:0002194!2.54e-10!63;CL:0000576!2.54e-10!63;CL:0000040!2.54e-10!63;CL:0000559!2.54e-10!63;CL:0000763!5.78e-10!112;CL:0000049!5.78e-10!112;CL:0002031!7.45e-08!124;CL:0000988!2.62e-07!182;CL:0000037!2.80e-07!172;CL:0000566!2.80e-07!172;CL:0002032!7.81e-07!165;CL:0000837!7.81e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-16;33!CL:0002057;2.07e-16;33!CL:0000766;4.58e-14;69!CL:0000094;2.29e-12;8!CL:0000473;2.47e-12;39!CL:0000234;2.47e-12;39!CL:0002393;5.11e-12;6!CL:0002397;5.11e-12;6!CL:0000576;6.63e-12;48!CL:0000081;2.46e-11;11!CL:0000767;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.29e-29,72;CL:0000860,1.58e-23,42;CL:0002057,1.58e-23,42;CL:0000557,1.64e-22,67;CL:0000473,2.93e-21,48;CL:0000234,2.93e-21,48;CL:0000738,1.33e-20,136;CL:0000839,5.76e-20,66;CL:0000763,5.20e-18,108;CL:0000049,5.20e-18,108;CL:0002009,1.86e-17,61;CL:0002194,7.53e-17,59;CL:0000576,7.53e-17,59;CL:0000040,7.53e-17,59;CL:0000559,7.53e-17,59;CL:0000988,2.54e-16,177;CL:0000037,6.56e-15,168;CL:0002032,1.20e-13,161;CL:0000837,1.20e-13,161;CL:0002031,1.60e-13,120;CL:0002087,2.11e-12,115;CL:0000094,2.63e-12,8;CL:0000081,2.74e-11,11;CL:0000134,4.36e-08,354;CL:0002393,8.99e-08,9;CL:0002397,8.99e-08,9;CL:0002320,1.27e-07,361;CL:0000767,7.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.76e-14!115;UBERON:0002371!2.00e-11!80;UBERON:0002390!1.19e-10!102;UBERON:0003061!1.19e-10!102;UBERON:0002193!1.55e-10!112;UBERON:0001474!2.90e-09!86;UBERON:0004765!1.16e-08!101;UBERON:0001434!1.16e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-20,98;UBERON:0003061,1.51e-20,98;UBERON:0002371,4.79e-20,76;UBERON:0002193,6.06e-20,108;UBERON:0001474,7.26e-18,82;UBERON:0002405,6.57e-17,93;UBERON:0004765,2.00e-15,90;UBERON:0001434,6.00e-13,100;UBERON:0003081,9.72e-11,203;UBERON:0002384,5.36e-07,371 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0,0,0.125542639594803,1.45185470921107,1.47781061009902,1.57421562627358,2.36018566109342,3.0706351847777,3.09632246632152,0,0,0,0,0,0,20.4978301156795,18.2495447197829,11.2845652772243,0,0,0,0,0.377875943688809,0.242584061187816,1.16214518452842,1.23350366406548,2.78735733805593,0.575384784644301,1.5369642391746,2.12834006899727,7.58440497620561,6.45484683583826,17.6054432572644,0.564727018627814,0.272906150057846,0.449446968890169,3.36692281607993,4.49300637906531,6.39337125799041,0.329851300186716,0.398927315243264,0,5.22376629531451,5.6738522469114,3.73693349397345,0.75374599577023,1.0429658368404,1.52032191293582,6.05399502633369,13.6262725315399,9.49387162322653,1.47878700418359,2.97646019951061,1.25795187305026,0.336985893439485,0.300353785683013,0.64290234678832,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,0,2.24203425192614,0,0.983548850569165,3.53709686474248,0.411202997999018,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.80642697289893,0.267440195783507,0.434473211648397,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.175669571386252,0.130979075497713,0.364295288292542,1.11235332835329,0,0,0.26591592103773,1.66943437013739,0.571994910780128,0,0,0,0,0,0,0,0,0,2.49036383880697,1.33888245105868,0,2.28081631715554,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0,10.5424333948851,15.511210565933,0.436094052142534,0,0,1.45650098894541,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.506328996723799,0,0,0,0.161646056818812,1.06502877754984,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0.4115740113314,0,2.53510069643662,0,0.590789906681404,0,0.737930631258681,0.343135620597051,1.64625428112938,0,0.100528972411631,0,0,0,0,0.115930404975077,0.234817388471643,0.721832238805369,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.567100388969546,0,0,0,4.92663237895944,0.264145302039678,2.48793738648926,2.59415916150531,1.2624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.857867961948885,0,0,0,0.710783897485092,0,2.1100756394171,0.871533458600294,0.799783929456456,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0.197030760201927,0.646882724578552,1.28343036279748,0,0,0,0,0,3.74503511973591,0,2.07207756718018,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,1.38745825144478,0,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0.164254312027618,0,0.232420756919918,0.725156697549733,2.40607764363942,0.0920809889358963,0,0.182091168006717,0,0,0.308061348417659,0,0,0,0,0.340187410553031,0.431831832204279,3.08454505380579,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0.574265537996172,6.50060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,1.15699440752685,0,0.765676274967505,0.30347334256665,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0.855877976067841,0,0,0.539617372749944,0,0.471249609382746,0.404364963146632,1.58510321173008,0,0,0.487426979262569,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0,0.286822704408103,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0.670302275535787,0,0.376575203107117,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0.842391534340376,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0.614481528616916,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,1.51159648712566,0.20453736500431,0.246169610922139,0.311039587661807,0,0.895105873378046,0.511572370226872,0.493217028184668,0,0,0,0.185536196323703,0,0,1.04951999995435,0,0,0.762760950878299,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,7.70954934569617,9.88511511572023,12.1129461426328,0.202203398942031,4.81546588379273,0,0,0,0.728341138602278,0,1.20990716048664,0,0.442306057399416,0.60129367765797,0.103688191397247,0,1.323967823502,0.313932918407225,0,0,0.554698692052555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| |||
|short_description=p10@IRF2BP2 | |||
}} |
Revision as of 00:47, 11 January 2014
Short description: | p10@IRF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IRF2BP2_5end |
Coexpression cluster: | C3952_CD14_Eosinophils_cord_Mast_Basophils_Dendritic_Neutrophils |
Association with transcript: | 48bp_to_ENST00000491430_5end |
EntrezGene: | IRF2BP2 |
HGNC: | 21729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.29e-29 | 72 |
classical monocyte | 1.58e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-23 | 42 |
granulocyte monocyte progenitor cell | 1.64e-22 | 67 |
defensive cell | 2.93e-21 | 48 |
phagocyte | 2.93e-21 | 48 |
leukocyte | 1.33e-20 | 136 |
myeloid lineage restricted progenitor cell | 5.76e-20 | 66 |
myeloid cell | 5.20e-18 | 108 |
common myeloid progenitor | 5.20e-18 | 108 |
macrophage dendritic cell progenitor | 1.86e-17 | 61 |
monopoietic cell | 7.53e-17 | 59 |
monocyte | 7.53e-17 | 59 |
monoblast | 7.53e-17 | 59 |
promonocyte | 7.53e-17 | 59 |
hematopoietic cell | 2.54e-16 | 177 |
hematopoietic stem cell | 6.56e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.20e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 1.60e-13 | 120 |
nongranular leukocyte | 2.11e-12 | 115 |
granulocyte | 2.63e-12 | 8 |
blood cell | 2.74e-11 | 11 |
mesenchymal cell | 4.36e-08 | 354 |
intermediate monocyte | 8.99e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.99e-08 | 9 |
connective tissue cell | 1.27e-07 | 361 |
basophil | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-20 | 98 |
blood island | 1.51e-20 | 98 |
bone marrow | 4.79e-20 | 76 |
hemolymphoid system | 6.06e-20 | 108 |
bone element | 7.26e-18 | 82 |
immune system | 6.57e-17 | 93 |
skeletal element | 2.00e-15 | 90 |
skeletal system | 6.00e-13 | 100 |
lateral plate mesoderm | 9.72e-11 | 203 |
connective tissue | 5.36e-07 | 371 |