FFCP PHASE1:Hg19::chr1:228270392..228270437,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=652 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3A6 | |||
|association_with_transcript=0bp_to_ENST00000470670,ENST00000477821,ENST00000542941_5end | |||
|description=CAGE_peak_1_at_ARF1_5end | |||
|id=chr1:228270392..228270437,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.36e-28!591;CL:0000548!2.67e-26!679;CL:0000004!2.67e-26!679;CL:0000255!2.67e-26!679;CL:0000012!1.95e-25!682;CL:0000144!1.98e-25!625;CL:0000003!7.54e-17!722;CL:0000766!1.65e-15!76;CL:0002057!1.21e-14!42;CL:0000063!3.73e-13!578;CL:0000192!2.55e-12!42;CL:0000514!2.55e-12!42;CL:0000048!3.68e-12!430;CL:0000723!3.96e-12!436;CL:0000839!6.27e-12!70;CL:0000860!8.34e-12!45;CL:0000183!8.93e-12!59;CL:0000222!1.53e-11!119;CL:0000359!2.29e-11!32;CL:0002194!7.40e-11!63;CL:0000576!7.40e-11!63;CL:0000040!7.40e-11!63;CL:0000559!7.40e-11!63;CL:0000557!1.21e-10!71;CL:0000034!1.98e-10!444;CL:0000187!2.81e-10!54;CL:0002009!3.98e-10!65;CL:0000680!4.07e-10!57;CL:0000056!4.07e-10!57;CL:0000355!4.07e-10!57;CL:0000055!8.83e-08!180;CL:0000393!2.62e-07!60;CL:0000211!2.62e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.42e-15;33!CL:0002057;8.42e-15;33!CL:0000473;4.36e-11;39!CL:0000234;4.36e-11;39!CL:0000359;1.28e-10;32!CL:0000576;7.48e-10;48!CL:0000192;5.18e-09;43!CL:0000766;2.63e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.58e-18,72;CL:0000860,1.21e-14,42;CL:0002057,1.21e-14,42;CL:0000839,3.50e-14,66;CL:0000473,2.60e-13,48;CL:0000234,2.60e-13,48;CL:0002194,4.00e-13,59;CL:0000576,4.00e-13,59;CL:0000040,4.00e-13,59;CL:0000559,4.00e-13,59;CL:0000048,4.55e-13,427;CL:0000723,4.94e-13,433;CL:0000557,1.05e-12,67;CL:0002009,3.06e-12,61;CL:0000192,3.56e-12,43;CL:0000514,3.56e-12,43;CL:0000222,1.75e-11,121;CL:0000359,2.29e-11,32;CL:0000034,2.94e-11,441;CL:0000187,3.33e-10,55;CL:0000680,4.73e-10,58;CL:0000056,4.73e-10,58;CL:0000355,4.73e-10,58;CL:0000393,2.81e-07,61;CL:0000211,2.81e-07,61;CL:0000763,3.57e-07,108;CL:0000049,3.57e-07,108;CL:0002320,6.08e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.71e-11;42!CL:0000514;5.18e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.96e-26!216;UBERON:0000926!1.23e-18!448;UBERON:0004120!1.23e-18!448;UBERON:0006603!1.23e-18!448;UBERON:0002204!1.08e-16!167;UBERON:0001637!1.88e-11!42;UBERON:0003509!1.88e-11!42;UBERON:0004572!1.88e-11!42;UBERON:0001009!1.88e-11!113;UBERON:0004535!2.57e-11!110;UBERON:0002371!2.61e-11!80;UBERON:0000055!2.81e-11!69;UBERON:0002049!8.92e-11!79;UBERON:0007798!8.92e-11!79;UBERON:0004872!1.36e-10!84;UBERON:0002193!1.46e-10!112;UBERON:0002390!6.01e-10!102;UBERON:0003061!6.01e-10!102;UBERON:0003914!7.47e-10!118;UBERON:0001981!1.03e-09!60;UBERON:0007500!1.03e-09!60;UBERON:0004537!1.03e-09!60;UBERON:0006965!1.03e-09!60;UBERON:0001474!1.44e-09!86;UBERON:0004765!3.32e-09!101;UBERON:0001434!3.32e-09!101;UBERON:0004290!6.04e-09!70;UBERON:0000480!6.45e-09!626;UBERON:0000486!7.78e-09!82;UBERON:0000914!8.34e-09!83;UBERON:0002329!8.34e-09!83;UBERON:0003077!8.34e-09!83;UBERON:0003059!8.34e-09!83;UBERON:0007282!8.34e-09!83;UBERON:0009618!8.34e-09!83;UBERON:0007285!8.34e-09!83;UBERON:0000467!1.21e-08!625;UBERON:0002405!1.95e-08!115;UBERON:0001134!2.33e-08!61;UBERON:0002036!2.33e-08!61;UBERON:0003082!2.33e-08!61;UBERON:0005256!2.94e-08!143;UBERON:0000468!3.91e-08!659;UBERON:0004573!6.48e-08!33;UBERON:0004571!6.48e-08!33;UBERON:0002385!7.26e-08!63;UBERON:0001015!7.26e-08!63;UBERON:0000383!7.26e-08!63;UBERON:0000923!1.52e-07!604;UBERON:0005291!1.52e-07!604;UBERON:0006598!1.52e-07!604;UBERON:0002532!1.52e-07!604;UBERON:0002050!2.04e-07!605;UBERON:0005423!2.04e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.30e-08;42!UBERON:0003509;5.30e-08;42!UBERON:0004572;5.30e-08;42!UBERON:0007500;3.25e-07;56!UBERON:0001981;3.25e-07;56!UBERON:0004537;3.25e-07;56!UBERON:0004573;3.66e-07;33!UBERON:0004571;3.66e-07;33!UBERON:0003914;4.89e-07;74 | |||
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Revision as of 00:32, 11 January 2014
Short description: | p1@ARF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470670, ENST00000477821, ENST00000542941_5end |
EntrezGene: | ARF1 |
HGNC: | 652 |
UniProt: | F5H3A6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.58e-18 | 72 |
classical monocyte | 1.21e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-14 | 42 |
myeloid lineage restricted progenitor cell | 3.50e-14 | 66 |
defensive cell | 2.60e-13 | 48 |
phagocyte | 2.60e-13 | 48 |
monopoietic cell | 4.00e-13 | 59 |
monocyte | 4.00e-13 | 59 |
monoblast | 4.00e-13 | 59 |
promonocyte | 4.00e-13 | 59 |
multi fate stem cell | 4.55e-13 | 427 |
somatic stem cell | 4.94e-13 | 433 |
granulocyte monocyte progenitor cell | 1.05e-12 | 67 |
macrophage dendritic cell progenitor | 3.06e-12 | 61 |
smooth muscle cell | 3.56e-12 | 43 |
smooth muscle myoblast | 3.56e-12 | 43 |
mesodermal cell | 1.75e-11 | 121 |
vascular associated smooth muscle cell | 2.29e-11 | 32 |
stem cell | 2.94e-11 | 441 |
muscle cell | 3.33e-10 | 55 |
muscle precursor cell | 4.73e-10 | 58 |
myoblast | 4.73e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.73e-10 | 58 |
electrically responsive cell | 2.81e-07 | 61 |
electrically active cell | 2.81e-07 | 61 |
myeloid cell | 3.57e-07 | 108 |
common myeloid progenitor | 3.57e-07 | 108 |
connective tissue cell | 6.08e-07 | 361 |