FFCP PHASE1:Hg19::chr1:203452580..203452624,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9357 | |||
|TSSclassifier=not | |||
|UniProt=Q6FHG6,Q6FG38 | |||
|association_with_transcript=267bp_to_CR541787,CR542270_5end | |||
|coexpression_cluster_id=C930 | |||
|description=CAGE_peak_3_at_PRELP_5end | |||
|id=chr1:203452580..203452624,+ | |||
|ontology_enrichment_celltype=CL:0000136!8.50e-13!15;CL:0000325!2.22e-07!39;CL:0000153!9.25e-07!9;CL:0000447!9.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.09e-14;13!CL:0000153;5.43e-11;9!CL:0000447;5.43e-11;9!CL:0000138;7.41e-09;6!CL:0002615;1.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.04e-12,15;CL:0000153,5.70e-11,9;CL:0000447,5.70e-11,9;CL:0000058,7.80e-09,6;CL:0000138,7.80e-09,6;CL:0002615,1.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.41e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-53!115;UBERON:0001049!2.33e-13!57;UBERON:0005068!2.33e-13!57;UBERON:0006241!2.33e-13!57;UBERON:0007135!2.33e-13!57;UBERON:0003080!1.63e-11!42;UBERON:0002780!1.02e-10!41;UBERON:0001890!1.02e-10!41;UBERON:0006240!1.02e-10!41;UBERON:0003075!1.05e-10!86;UBERON:0007284!1.05e-10!86;UBERON:0002616!5.67e-10!59;UBERON:0002346!1.11e-09!90;UBERON:0004457!5.69e-09!12;UBERON:0000042!5.69e-09!12;UBERON:0001893!8.12e-09!34;UBERON:0000062!1.04e-08!511;UBERON:0001017!1.67e-08!82;UBERON:0002791!1.84e-08!33;UBERON:0005743!2.44e-08!86;UBERON:0000955!2.61e-08!69;UBERON:0006238!2.61e-08!69;UBERON:0002020!5.72e-08!34;UBERON:0003528!5.72e-08!34;UBERON:0002619!7.04e-08!22;UBERON:0001869!7.62e-08!32;UBERON:0001950!8.43e-08!20;UBERON:0003688!2.53e-07!6;UBERON:0002358!2.53e-07!6;UBERON:0003684!2.53e-07!6;UBERON:0001178!2.53e-07!6;UBERON:0003056!2.77e-07!61;UBERON:0000073!3.89e-07!94;UBERON:0001016!3.89e-07!94;UBERON:0000153!7.97e-07!129;UBERON:0007811!7.97e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.36e-10;9!UBERON:0000042;1.36e-10;9!UBERON:0007023;2.20e-09;114!UBERON:0003688;1.99e-08;6!UBERON:0002358;1.99e-08;6!UBERON:0003684;1.99e-08;6!UBERON:0001178;1.99e-08;6!UBERON:0005904;1.26e-07;4!UBERON:0003135;1.96e-07;11!UBERON:0003978;4.80e-07;3!UBERON:0000946;4.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-38,114;UBERON:0004457,2.49e-12,12;UBERON:0000042,2.49e-12,12;UBERON:0003688,1.78e-08,6;UBERON:0002358,1.78e-08,6;UBERON:0003684,1.78e-08,6;UBERON:0001178,1.78e-08,6;UBERON:0005904,9.02e-08,4;UBERON:0003135,1.33e-07,11;UBERON:0004458,2.44e-07,49;UBERON:0003978,4.40e-07,3;UBERON:0009751,4.40e-07,3;UBERON:0000946,4.40e-07,3;UBERON:0002523,4.40e-07,3;UBERON:0005983,4.40e-07,3;UBERON:0002165,4.40e-07,3;UBERON:0002062,4.40e-07,3;UBERON:0007280,4.40e-07,3 | |||
|phase1_expression=18.5311946855968,8.56402095563933,32.2785585379774,10.007329835313,23.6889380046463,19.1914475302081,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,5.06014813338393,4.51204119572301,13.0361867064741,42.1501551937083,54.9897403441979,0.0945348171640679,0,0,2.35762335895883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0.919463387397059,0.901428353439581,0,3.04962380671065,3.84403299873421,0,0,0.309157587715317,1.03056216018252,0.558350568994769,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,4.0411514204703,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,1.17217447210047,0,1.54241239054985,1.50171528921959,6.28818151787272,0,0.43596006883328,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0.468565659970853,0.300946099727719,4.5481500811197,0,0,0,2.08520674723399,0,0,0,0,0,0,0,0.604780586659361,2.23297027036899,0.153461973288062,0,4.99742682097234,1.53512174720011,0.804269605718038,2.96836132889982,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31591182698828,0.183138929636687,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.709522128141196,22.1663017062547,10.208141681757,0,0,0,0,0,5.93105944893709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61842532213849,0,0,0.284136146806413,0.23874448473769,0,0,0.994147647766298,1.1253553312841,0,0,0,16.5375830248388,3.03912307084262,0,0,0,3.11039587661807,0,0,0,17.7558130146481,0,0,1.93866549219044,0.649376687132959,0,0,0,12.3249927823915,0,0,0,0,0,0,0,0.723578631752448,0,0.995213339381022,0.591095237907095,1.09692698576986,0,0,17.1599076463467,0,0,0,0,0.638002319463839,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,9.90724722437399,6.72133159426988,0,0,0,0.337005664903385,0.802577647298789,0.702793337176017,0,0,0,3.55125962564451,0,0.30607276163049,2.96976924253893,0,0,0,0,0,0,0,0,0,0,0,5.94070672022902,0,0,0,0,9.79589066533036,0,11.7509985205877,0,0,0.126621591911757,0,0,8.75157278431345,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,36.306712165393,6.87481272035051,7.89660327034495,0.798716001995964,10.7306512034143,1.56220020209311,0.604651252380536,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.303747783290123,0,0.788057072991982,0.734364233889974,0,0,0,10.7204298956005,3.31045985182716,0,0.542999601753713,0,0.979762080328227,0,0,0,0,1.46552233678082,0,0.129282956361551,0,0,0,14.3095132840711,1.72924735609633,12.4271716604159,0.992332043623902,0,0,0,4.89616023032527,4.2617281983859,4.28883807468846,8.19681576774511,0,0.886068179966986,0.976210119215705,0.876336514945499,0,1.44207766997908,0.434674820589684,0,0,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0.50313580350515,1.77962244319307,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,1.23069818544453,0.252071696221718,0.276629009856872,1.29180516505481,1.42769420259154,0,0,0,0,0,0,3.97832444232549,12.0336525358812,0,0,0,0.163771917510097,0,0.135075169236789,0,1.65349437200947,0.253663240775627,0,1.09651553371436,9.92422356778589,0,0,1.07140367175657,0,1.21393120847326,1.59363533945908,0.532214220975833,0,0,0.339848664884159,0.0657727735628491,0,0,10.2041020705668,1.09980912941201,0,0.913158720509496,0,0,6.07550625501579,0,0,0,0,0,0,0,0.860454717640555,0,0,5.92741870267301,0,0,0,0,0,0,3.23714418593947,5.44112876338109,0,2.4285549652957,0,0,0,0,0,0,3.00979216620984,0.218559560503957,0,9.31563622664841,0,2.55201007249429,0.594092800654172,0.4226557275834,0,5.07513157091209,3.35181017462601,0,0,0,0,0,0.917458566809082,1.00337708206016,0,0.203974470572744,0,2.645134202577,1.48798007266701,9.70568820125978,0.865253124247578,0,0,2.15387451719443,0,0,0,0,7.57786982182394,1.87574891109325,0,0.724030971033267,17.4851865158804,0.476128862927481,0.129177819672012,0.434523000071005,0,5.02812550397503,0.202117188958219,7.62008617639365,0.684466602170562,0.673520530145875,5.1639987882727,2.66128285236811,0,0,0,0,7.03922827210363,7.21224520678912,1.22068853494722,25.964514193235,5.63566622054873,0 | |||
|short_description=p3@PRELP | |||
}} |
Revision as of 23:32, 10 January 2014
Short description: | p3@PRELP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRELP_5end |
Coexpression cluster: | C930_Chondrocyte_vagina_heart_Adipocyte_aorta_bladder_mature |
Association with transcript: | 267bp_to_CR541787, CR542270_5end |
EntrezGene: | PRELP |
HGNC: | 9357 |
UniProt: | Q6FHG6Q6FG38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.04e-12 | 15 |
GAG secreting cell | 5.70e-11 | 9 |
carbohydrate secreting cell | 5.70e-11 | 9 |
chondroblast | 7.80e-09 | 6 |
chondrocyte | 7.80e-09 | 6 |
adipocyte of omentum tissue | 1.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.41e-38 | 114 |
cavity lining | 2.49e-12 | 12 |
serous membrane | 2.49e-12 | 12 |
omentum | 1.78e-08 | 6 |
peritoneum | 1.78e-08 | 6 |
abdominal cavity | 1.78e-08 | 6 |
visceral peritoneum | 1.78e-08 | 6 |
duct of male reproductive system | 9.02e-08 | 4 |
male reproductive organ | 1.33e-07 | 11 |
body cavity or lining | 2.44e-07 | 49 |
valve | 4.40e-07 | 3 |
cardiac mesenchyme | 4.40e-07 | 3 |
cardial valve | 4.40e-07 | 3 |
tunica intima | 4.40e-07 | 3 |
heart layer | 4.40e-07 | 3 |
endocardium | 4.40e-07 | 3 |
endocardial cushion | 4.40e-07 | 3 |
presumptive endocardium | 4.40e-07 | 3 |