FFCP PHASE1:Hg19::chr1:201453026..201453042,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:201453026..201453042,- | |||
|id=chr1:201453026..201453042,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.67e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.53e-09;3!DOID:127;2.53e-09;3!DOID:0060072;4.51e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.44e-09,3;DOID:127,3.44e-09,3;DOID:0060072,5.65e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000468!6.17e-10!659;UBERON:0007023!1.26e-09!115;UBERON:0002050!2.33e-09!605;UBERON:0005423!2.33e-09!605;UBERON:0000922!4.25e-09!612;UBERON:0000923!4.58e-09!604;UBERON:0005291!4.58e-09!604;UBERON:0006598!4.58e-09!604;UBERON:0002532!4.58e-09!604;UBERON:0000477!5.16e-09!286;UBERON:0000481!7.98e-09!347;UBERON:0000467!9.97e-09!625;UBERON:0000480!1.38e-08!626;UBERON:0000475!3.81e-08!365;UBERON:0000062!2.48e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000923,4.82e-07,560;UBERON:0010316,4.82e-07,560;UBERON:0005291,4.82e-07,560;UBERON:0006598,4.82e-07,560;UBERON:0010317,4.82e-07,560;UBERON:0002532,4.82e-07,560;UBERON:0002050,6.94e-07,564;UBERON:0007023,7.87e-07,114 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,2.00146596706261,0.893922188854576,0,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0.218441372130172,1.05506791291381,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0,0.547497700291537,0.753255837568817,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0.795285947051099,0,0.189069634328136,0.665188192387692,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,1.6507082516404,1.25396979922086,0,0,0,0,0,0,0.735326160691737,2.43042584364528,0.357198913136319,0,0,0,0,0.549605231791222,0,0,0,0.993943903390637,0.12663051166458,0,0,0.354668382198357,1.12135520028461,4.2699598291882,1.97334038733728,0.311211035399766,0.538842688278752,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.103325781175765,0,1.23633464639278,0,0.718618141816238,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0.919463387397059,0.901428353439581,0.567160915800105,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0.558350568994769,0,0.292311015483596,0,0.276149695926898,0.323292113637624,0,0.705264687593482,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,0,3.85944562915731,0,0,0,0.354920400119532,1.01150814046861,1.20505514941741,0.441175890929576,0.653638332277218,0.237270619111097,0.404493924480493,0.784885860501384,0,1.4763109092493,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0.468008530278475,0.297262324577456,0,0.839910640994298,0,0,0.290633938513962,0.383382679165211,0,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0.381988425558278,0,0,0.308482478109971,0,0,0,0,0,0.258543431515556,3.57656445851882,0,0.531876233169741,2.08014873822732,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0.355391948742546,2.37585561880029,0,0,0.799783929456456,0,0,2.10833939483032,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,3.92543775353756,0.788512075169673,0.585707074963566,0,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,1.20956117331872,0.248107807818777,0,0.561320188866147,0,0.511707249066704,1.28683136914886,0,1.3878872442239,1.42049380250502,0.164254312027618,0,0.697262270759755,0,0.601519410909855,0.276242966807689,0.229628896329213,0.364182336013434,1.31124414959424,0,0,0,0,0,1.13733384070897,0.510281115829547,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0.165284915360978,0.384380134730212,0,0.50578890427775,0,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0.572499546967965,0,0,0.571890581771475,0.255897791311334,0.855877976067841,0,1.56989728039846,0.179872457583315,0.54907405947211,0.353437207037059,0.808729926293264,0,0,0,0.487426979262569,0,0.272999822815972,0.424216295861138,0,0,1.32687795048244,1.75380354101505,0.578775534266688,0,0.405820753925408,0.6196469961995,2.53526042279017,0,0.196498082026242,0.7133421029625,0.354761064070598,0.211107635297664,0.987884678879706,0,1.04980416073495,0,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0.649243880549111,0,0,0,0,0.169291777801603,0.481764225311099,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,3.38721580026819,2.21027132424918,0,0.306806047506464,0,0,0,0.179021174675609,0,2.56472854656027,0,0,1.93866549219044,0.649376687132959,0,0,0,1.44999915086959,0.227586896570999,0,0.236387681767936,0,0,0.347249989866585,0,0.361789315876224,0,0.331737779793674,0,0.658156191461918,0,0.139423744278603,0.846452843541768,0,0,0,0,0,0.366390373607449,0.533034776018635,1.02193298195737,0.156980256395025,0.498635045700469,0,0,0,0,0,0.210998064528027,0,0,0,2.98578579323551,0.973033209536731,1.83309043480088,0,0.123563938946503,0,0.337005664903385,0,1.1713222286267,0.182454789215666,0,0,0.7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| |||
|short_description=p@chr1:201453026..201453042,- | |||
}} |
Revision as of 23:18, 10 January 2014
Short description: | p@chr1:201453026..201453042, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201453026..201453042, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ layer | 4.82e-07 | 560 |
germ layer / neural crest | 4.82e-07 | 560 |
embryonic tissue | 4.82e-07 | 560 |
presumptive structure | 4.82e-07 | 560 |
germ layer / neural crest derived structure | 4.82e-07 | 560 |
epiblast (generic) | 4.82e-07 | 560 |
embryonic structure | 6.94e-07 | 564 |
adult organism | 7.87e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.44e-09 | 3 |
leiomyoma | 3.44e-09 | 3 |
benign neoplasm | 5.65e-07 | 4 |