FFCP PHASE1:Hg19::chr1:198227908..198227922,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:198227908..198227922,+ | |||
|id=chr1:198227908..198227922,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-14!180;CL:0000057!7.26e-13!75;CL:0002620!1.87e-10!23;CL:0000680!1.04e-09!57;CL:0000056!1.04e-09!57;CL:0000355!1.04e-09!57;CL:0000192!2.15e-09!42;CL:0000514!2.15e-09!42;CL:0000187!7.55e-09!54;CL:0000548!5.35e-08!679;CL:0000004!5.35e-08!679;CL:0000255!5.35e-08!679;CL:0000077!7.08e-08!19;CL:0000012!8.58e-08!682;CL:0000144!1.21e-07!625;CL:0000183!1.60e-07!59;CL:0000393!2.75e-07!60;CL:0000211!2.75e-07!60;CL:0000359!3.90e-07!32;CL:0000723!3.96e-07!436;CL:0000048!6.76e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002166;8.31e-09;3!CL:0002601;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.36e-09,3;CL:0002601,6.20e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.09e-08!5;DOID:450!9.09e-08!5;DOID:66!9.09e-08!5;DOID:423!9.09e-08!5;DOID:0080000!9.09e-08!5;DOID:11722!9.09e-08!5;DOID:2394!1.24e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.80e-18;3!DOID:127;2.80e-18;3!DOID:0060072;7.50e-14;4!DOID:2513;1.15e-07;1!DOID:0060060;3.20e-07;1!DOID:0060061;3.20e-07;1!DOID:8691;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.01e-18,3;DOID:127,3.01e-18,3;DOID:0060072,7.91e-14,4;DOID:2513,1.20e-07,1;DOID:0060060,4.60e-07,1;DOID:0060061,4.60e-07,1;DOID:8691,4.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.07e-10!83;UBERON:0002329!7.07e-10!83;UBERON:0003077!7.07e-10!83;UBERON:0003059!7.07e-10!83;UBERON:0007282!7.07e-10!83;UBERON:0009618!7.07e-10!83;UBERON:0007285!7.07e-10!83;UBERON:0001134!1.41e-08!61;UBERON:0002036!1.41e-08!61;UBERON:0003082!1.41e-08!61;UBERON:0002385!4.49e-08!63;UBERON:0001015!4.49e-08!63;UBERON:0000383!4.49e-08!63;UBERON:0002097!1.44e-07!40;UBERON:0004290!2.65e-07!70;UBERON:0002199!5.65e-07!45;UBERON:0002416!5.65e-07!45;UBERON:0000486!6.31e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;8.31e-07;4!UBERON:0008895;8.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,8.34e-07,4;UBERON:0008895,8.34e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,1.22433556948361,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,8.07696002960635,0,0.354668382198357,1.12135520028461,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0.438977620880838,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,1.92201649936711,1.27159140695737,0.600182192168805,0.721367704669072,0.772921620136887,0.37223371266318,1.68776332241266,0.0974370051611986,0.504867548488229,0.828449087780694,0,0.355009592516614,1.0075209822764,1.52604533079439,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,1.87467667973554,1.00789276919316,0.425325291727159,0.268675568108545,0.581267877027924,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.80863626235752,1.74306691720059,1.49959486773086,0,0,0,0.479249710983165,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.07057393278297,0,1.40569697991256,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,1.24053903909388,0.920771839728375,0.561320188866147,0.512556597022804,0,1.44768529029247,0,0,0.355123450626254,0.246381468041427,0,0,0,0.601519410909855,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,1.5740617341532,0.6970372701606,0,0,0,0.18532421910392,0,0,0.632758849437452,0.38126038784765,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.811641507850816,0,0,0.430234056612155,0.491245205065606,0.35667105148125,1.06428319221179,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.307160702099232,0,0,1.00177834520615,0,0,0,0,0,0,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,3.66941356398758,3.87030531355633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,1.72844298240254,1.30634944043764,0,0,3.23737241392301,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0,1.25783950876288,0,0.228840068396924,0.302461847526478,0,0,0.159296767163702,0,0.310525913752519,0.829412415681711,0.53168342911599,0,1.95334891696384,0.761610424337591,0.813741466409323,0,0.107410557042488,0.464033759878494,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0.57785949122191,0.428883182749851,0.260994291965212,0,0,0.734210113519403,0,0.308801447160972,0.219284049578707,0.530067437837643,1.54331230616732,0.168942440653073,0,0,0,0,0,0.664324201566815,0.490696182767533,0.327609848846413,0,0,1.19992437512958,0,0,0.567515953566836,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:198227908..198227922,+ | |||
}} |
Revision as of 23:07, 10 January 2014
Short description: | p@chr1:198227908..198227922, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:198227908..198227922, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 8.36e-09 | 3 |
uterine smooth muscle cell | 6.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 8.34e-07 | 4 |
splanchnocranium | 8.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.01e-18 | 3 |
leiomyoma | 3.01e-18 | 3 |
benign neoplasm | 7.91e-14 | 4 |
basal cell carcinoma | 1.20e-07 | 1 |
non-Hodgkin lymphoma | 4.60e-07 | 1 |
cutaneous T cell lymphoma | 4.60e-07 | 1 |
mycosis fungoides | 4.60e-07 | 1 |