FFCP PHASE1:Hg19::chr1:183775145..183775148,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=23179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30281 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NZL6 | |||
|association_with_transcript=-376bp_to_AL080117_5end | |||
|description=CAGE_peak_6_at_RGL1_5end | |||
|id=chr1:183775145..183775148,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.81e-13!65;CL:0002194!2.82e-13!63;CL:0000576!2.82e-13!63;CL:0000040!2.82e-13!63;CL:0000559!2.82e-13!63;CL:0000557!7.63e-13!71;CL:0000839!2.22e-12!70;CL:0002057!5.47e-11!42;CL:0000766!1.57e-10!76;CL:0000860!6.02e-10!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.98e-24;39!CL:0000234;1.98e-24;39!CL:0000860;2.35e-21;33!CL:0002057;2.35e-21;33!CL:0000576;3.68e-19;48!CL:0002619;1.67e-13;3!CL:0000766;3.06e-11;69!CL:0000235;3.56e-11;6!CL:0000763;3.92e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.13e-30,59;CL:0000576,3.13e-30,59;CL:0000040,3.13e-30,59;CL:0000559,3.13e-30,59;CL:0002009,4.56e-29,61;CL:0000473,8.36e-29,48;CL:0000234,8.36e-29,48;CL:0000839,1.82e-26,66;CL:0000557,5.43e-26,67;CL:0000766,8.13e-24,72;CL:0000860,8.04e-21,42;CL:0002057,8.04e-21,42;CL:0000763,4.39e-14,108;CL:0000049,4.39e-14,108;CL:0002619,1.61e-13,3;CL:0002087,6.69e-13,115;CL:0002031,3.84e-12,120;CL:0000235,3.87e-11,6;CL:0000738,4.28e-10,136;CL:0002032,9.86e-08,161;CL:0000837,9.86e-08,161;CL:0000037,3.34e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.83e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-16!57;UBERON:0005068!2.19e-16!57;UBERON:0006241!2.19e-16!57;UBERON:0007135!2.19e-16!57;UBERON:0007023!5.21e-15!115;UBERON:0002346!8.73e-14!90;UBERON:0002616!2.43e-13!59;UBERON:0003075!3.14e-12!86;UBERON:0007284!3.14e-12!86;UBERON:0002020!8.13e-12!34;UBERON:0003528!8.13e-12!34;UBERON:0000073!9.97e-12!94;UBERON:0001016!9.97e-12!94;UBERON:0001893!2.23e-11!34;UBERON:0002791!3.95e-11!33;UBERON:0002780!3.97e-11!41;UBERON:0001890!3.97e-11!41;UBERON:0006240!3.97e-11!41;UBERON:0001017!4.58e-11!82;UBERON:0003080!1.41e-10!42;UBERON:0005743!1.71e-10!86;UBERON:0000955!1.85e-10!69;UBERON:0006238!1.85e-10!69;UBERON:0001869!2.24e-10!32;UBERON:0002371!4.02e-10!80;UBERON:0001474!2.73e-09!86;UBERON:0002619!1.61e-08!22;UBERON:0002405!1.65e-08!115;UBERON:0000956!1.71e-08!25;UBERON:0000203!1.71e-08!25;UBERON:0002193!4.42e-08!112;UBERON:0002390!4.51e-08!102;UBERON:0003061!4.51e-08!102;UBERON:0003056!1.16e-07!61;UBERON:0001950!1.67e-07!20;UBERON:0003076!1.94e-07!15;UBERON:0003057!1.94e-07!15;UBERON:0004765!7.36e-07!101;UBERON:0001434!7.36e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.79e-22,76;UBERON:0001474,2.95e-20,82;UBERON:0004765,5.62e-18,90;UBERON:0002405,3.19e-17,93;UBERON:0002390,4.54e-16,98;UBERON:0003061,4.54e-16,98;UBERON:0001434,1.22e-15,100;UBERON:0002193,4.39e-14,108;UBERON:0002204,3.63e-08,167;UBERON:0003081,3.54e-07,203;UBERON:0002346,8.99e-07,86 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,1.14494394852423,0,0.125542639594803,0.687720651731561,0.246301768349837,0.550975469195755,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.434021741431704,4.03047853631864,2.59114932815184,3.09090681161024,0.872389432677388,0,0.727752183563449,4.18372266430232,0.411167888021826,1.85823822537062,3.16461631554365,0.256160706529101,2.12834006899727,0.689491361473237,0,0,1.69418105588344,0,1.34834090667051,3.06083892370903,0,1.27867425159808,4.94776950280074,0.598390972864896,2.55734850319616,0.290209238628584,0,0,3.76872997885115,2.08593167368081,2.6062661364614,1.21079900526674,0.368277635987565,2.84816148696796,1.05627643155971,0,0.209658645508376,0.336985893439485,0.450530678524519,0,0,0.99458338599545,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.822189523018381,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,0.196468613246569,0,0,0,0.174129737299267,0.797747763113191,0.238490624305342,0,0,0.596287222100115,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.12663051166458,1.45650098894541,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.561803226808994,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.951270761172991,0,0,2.95460407304877,0,0.594524649154913,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.576479813667846,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,2.43247561282381,2.00902836572851,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,1.91381625495949,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0,0,0,0,0,0.462145851343933,0.307007349452259,0.413509717453592,0.429680979473094,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.286822704408103,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,3.84991942105343,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.703347082052564,0.222617410045812,0.494411622680279,0.844501632511974,0.597743964753209,0,2.26739473068848,0,0.369254416383208,0,0.269605053441981,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,5.83209226766509,0,0.885741385813839,0.482385754501632,1.52581736317083,0.552896299656123,0.295547618953547,0,0,0,0.153900517007594,0.227884111694002,0,0.538545866458633,0.434589487688032,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.265372693510018,0.611030144933625,0.593042257361244,0.370691816839509,0,0.539209063845416,3.21031058919516,0,0,0.19566461893209,0,0,0,0.91821828489147,0.063186579628488,0.60129367765797,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0.195551382734803,0,0.85381197895741,0,0,0,0.857974989309823,0,0,0,0,0.104602846312333,0.407992870545287,0,0,0.684526894459965,0,0,0.525774708558629,2.23425921017803,0.687481272035051,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0.0671834724867263,0.360299883542404,0,0.315132729228895,0.0824158583811665,0.26961417541674,0.0984274815147488,0.0846733320657845,1.59045937961861,0.408610218334727,0,0,0,0.674921674654501,0,0.425246896606173,0,0.315222829196793,0.577000469484979,0,0,0,0,0.662091970365432,0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| |||
|short_description=p6@RGL1 | |||
}} |
Revision as of 22:44, 10 January 2014
Short description: | p6@RGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RGL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -376bp_to_AL080117_5end |
EntrezGene: | RGL1 |
HGNC: | 30281 |
UniProt: | Q9NZL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.13e-30 | 59 |
monocyte | 3.13e-30 | 59 |
monoblast | 3.13e-30 | 59 |
promonocyte | 3.13e-30 | 59 |
macrophage dendritic cell progenitor | 4.56e-29 | 61 |
defensive cell | 8.36e-29 | 48 |
phagocyte | 8.36e-29 | 48 |
myeloid lineage restricted progenitor cell | 1.82e-26 | 66 |
granulocyte monocyte progenitor cell | 5.43e-26 | 67 |
myeloid leukocyte | 8.13e-24 | 72 |
classical monocyte | 8.04e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.04e-21 | 42 |
myeloid cell | 4.39e-14 | 108 |
common myeloid progenitor | 4.39e-14 | 108 |
adult endothelial progenitor cell | 1.61e-13 | 3 |
nongranular leukocyte | 6.69e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.84e-12 | 120 |
macrophage | 3.87e-11 | 6 |
leukocyte | 4.28e-10 | 136 |
hematopoietic oligopotent progenitor cell | 9.86e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.86e-08 | 161 |
hematopoietic stem cell | 3.34e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.79e-22 | 76 |
bone element | 2.95e-20 | 82 |
skeletal element | 5.62e-18 | 90 |
immune system | 3.19e-17 | 93 |
hematopoietic system | 4.54e-16 | 98 |
blood island | 4.54e-16 | 98 |
skeletal system | 1.22e-15 | 100 |
hemolymphoid system | 4.39e-14 | 108 |
musculoskeletal system | 3.63e-08 | 167 |
lateral plate mesoderm | 3.54e-07 | 203 |
neurectoderm | 8.99e-07 | 86 |