FFCP PHASE1:Hg19::chr1:183387723..183387763,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16789 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZQ4 | |||
|association_with_transcript=0bp_to_ENST00000287713,uc001gqc.1_5end | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_7_at_NMNAT2_5end | |||
|id=chr1:183387723..183387763,- | |||
|ontology_enrichment_celltype=CL:0002322!1.65e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.41e-16;1!CL:0000164;1.41e-16;1!CL:0000502;1.41e-16;1!CL:0000172;1.41e-16;1!CL:0000173;1.41e-16;1!CL:0000333;1.85e-13;5!CL:0000039;9.11e-10;7!CL:0000586;9.11e-10;7!CL:0000047;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.41e-16,1;CL:0000164,1.41e-16,1;CL:0000502,1.41e-16,1;CL:0000172,1.41e-16,1;CL:0000173,1.41e-16,1;CL:0002351,1.41e-16,1;CL:0000039,9.11e-10,7;CL:0000586,9.11e-10,7 | |||
|ontology_enrichment_development_v019=CL:0002351;1.41e-16;1!UBERON:0009117;4.26e-07;10!UBERON:0005564;4.26e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!2.46e-12!22;DOID:2994!2.46e-12!22;DOID:169!3.48e-11!6;DOID:171!7.32e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:169;8.45e-24;6!DOID:3095;1.44e-17;22!DOID:2994;1.44e-17;22!DOID:4430;1.41e-16;1!DOID:171;1.47e-14;10!DOID:3119;2.35e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.46e-24,6;DOID:3095,1.44e-17,22;DOID:2994,1.44e-17,22;DOID:4430,1.41e-16,1;DOID:171,1.47e-14,10;DOID:3119,2.38e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.60e-39!94;UBERON:0001016!2.60e-39!94;UBERON:0001049!2.48e-37!57;UBERON:0005068!2.48e-37!57;UBERON:0006241!2.48e-37!57;UBERON:0007135!2.48e-37!57;UBERON:0002616!9.09e-36!59;UBERON:0002780!4.55e-35!41;UBERON:0001890!4.55e-35!41;UBERON:0006240!4.55e-35!41;UBERON:0002020!3.25e-34!34;UBERON:0003528!3.25e-34!34;UBERON:0003080!4.53e-34!42;UBERON:0005743!1.49e-33!86;UBERON:0001017!9.16e-32!82;UBERON:0001893!6.36e-31!34;UBERON:0000955!8.27e-31!69;UBERON:0006238!8.27e-31!69;UBERON:0001869!2.45e-30!32;UBERON:0002791!3.36e-29!33;UBERON:0003075!2.86e-28!86;UBERON:0007284!2.86e-28!86;UBERON:0002346!3.09e-28!90;UBERON:0003056!5.79e-25!61;UBERON:0002619!1.79e-23!22;UBERON:0001950!7.86e-23!20;UBERON:0000956!2.87e-20!25;UBERON:0000203!2.87e-20!25;UBERON:0007023!3.16e-20!115;UBERON:0000924!3.48e-17!173;UBERON:0006601!3.48e-17!173;UBERON:0004121!7.30e-17!169;UBERON:0000033!8.62e-17!123;UBERON:0002308!1.39e-16!9;UBERON:0000125!1.39e-16!9;UBERON:0000153!1.42e-15!129;UBERON:0007811!1.42e-15!129;UBERON:0000200!2.85e-14!6;UBERON:0002420!8.23e-13!9;UBERON:0007245!8.23e-13!9;UBERON:0010009!8.23e-13!9;UBERON:0010011!8.23e-13!9;UBERON:0000454!8.23e-13!9;UBERON:0009663!2.88e-12!7;UBERON:0001871!4.34e-11!7;UBERON:0000369!1.40e-10!4;UBERON:0002435!1.40e-10!4;UBERON:0000204!1.40e-10!4;UBERON:0010082!1.40e-10!4;UBERON:0000025!1.34e-09!194;UBERON:0000013!8.71e-09!5;UBERON:0002410!8.71e-09!5;UBERON:0005383!1.54e-08!3;UBERON:0005382!1.54e-08!3;UBERON:0002771!3.03e-08!3;UBERON:0000988!3.79e-08!3;UBERON:0006331!6.81e-08!3;UBERON:0002298!1.95e-07!8;UBERON:0004733!3.38e-07!12;UBERON:0002028!3.38e-07!12;UBERON:0007277!3.38e-07!12;UBERON:0002680!4.81e-07!9;UBERON:0001895!4.81e-07!9;UBERON:0010092!4.81e-07!9;UBERON:0004111!5.04e-07!241;UBERON:0000010!6.24e-07!8;UBERON:0000064!6.25e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.25e-16;1!UBERON:0000013;1.85e-13;5!UBERON:0002410;1.85e-13;5!UBERON:0000473;1.17e-08;8!UBERON:0000010;7.01e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,3.07e-16,1;UBERON:0000013,1.85e-13,5;UBERON:0002410,1.85e-13,5;UBERON:0000473,1.17e-08,8;UBERON:0000010,7.01e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.5611905921183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,1.37897349296586,0,0.173624994933292,0.885741385813839,0.241192877250816,1.52581736317083,0.774054819518572,0,0.219385397153973,0,0.975966209950223,0,0,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0.728341138602278,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0,0,0,0.316553979779393,0.195551382734803,0,0,0,3.31407959454444,0.343609788497747,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.607495566580247,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,5.30369197441421,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.244052529803926,0.625954653532499,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44102850604101,0.431299245586727,10.3795521624892,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,0,0.206686796501184,0.380494861163441,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,1.09980912941201,1.12108865325516,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.219881033490858,0.452888530700021,0,0,0,0,2.12108892391463,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.679914901909147,0,0,0,0,0,0,0.437062287854782,0,0.815910637935854,5.07713070004565,3.76769088092864,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.244209805832924,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p7@NMNAT2 | |||
}} |
Revision as of 22:42, 10 January 2014
Short description: | p7@NMNAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NMNAT2_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 0bp_to_ENST00000287713, uc001gqc.1_5end |
EntrezGene: | NMNAT2 |
HGNC: | 16789 |
UniProt: | Q9BZQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.41e-16 | 1 |
enteroendocrine cell | 1.41e-16 | 1 |
type D enteroendocrine cell | 1.41e-16 | 1 |
somatostatin secreting cell | 1.41e-16 | 1 |
pancreatic D cell | 1.41e-16 | 1 |
progenitor cell of endocrine pancreas | 1.41e-16 | 1 |
germ line cell | 9.11e-10 | 7 |
germ cell | 9.11e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
putamen | 3.07e-16 | 1 |
sympathetic nervous system | 1.85e-13 | 5 |
autonomic nervous system | 1.85e-13 | 5 |
testis | 1.17e-08 | 8 |
peripheral nervous system | 7.01e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.46e-24 | 6 |
germ cell and embryonal cancer | 1.44e-17 | 22 |
germ cell cancer | 1.44e-17 | 22 |
somatostatinoma | 1.41e-16 | 1 |
neuroectodermal tumor | 1.47e-14 | 10 |
gastrointestinal system cancer | 2.38e-10 | 14 |