FFCP PHASE1:Hg19::chr1:178310639..178310679,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9462 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9874 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJF2,A8K2P3 | |||
|association_with_transcript=33bp_to_ENST00000462775,NM_004841,uc001glr.2_5end | |||
|description=CAGE_peak_9_at_RASAL2_5end | |||
|id=chr1:178310639..178310679,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.81e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.92e-14;3!CL:0000128;2.52e-10;7!CL:0000126;2.52e-10;7!CL:0000127;2.52e-10;7!CL:0002537;3.96e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.10e-14,3;CL:0000128,2.37e-10,7;CL:0000126,2.37e-10,7;CL:0000127,2.37e-10,7;CL:0002453,2.37e-10,7;CL:0002537,4.25e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.07e-10;4!UBERON:0007284;4.07e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.78e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.35e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.81e-08!69;UBERON:0000161!3.50e-08!35;UBERON:0000467!3.93e-08!625;UBERON:0000480!4.82e-08!626;UBERON:0001004!8.94e-08!72;UBERON:0000468!9.82e-08!659;UBERON:0000062!1.70e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;2.66e-10;2!UBERON:0000002;2.09e-07;6!UBERON:0001560;2.09e-07;6!UBERON:0000974;2.57e-07;6!UBERON:0001723;2.58e-07;3!UBERON:0001033;2.58e-07;3!UBERON:0010313;6.13e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,3.22e-10,11;UBERON:0001042,1.85e-07,10;UBERON:0009145,1.85e-07,10;UBERON:0000002,2.24e-07,6;UBERON:0001560,2.24e-07,6;UBERON:0001723,2.67e-07,3;UBERON:0001033,2.67e-07,3;UBERON:0010056,2.67e-07,3;UBERON:0004121,4.18e-07,171;UBERON:0000924,4.18e-07,171;UBERON:0006601,4.18e-07,171;UBERON:0005795,7.75e-07,22;UBERON:0000166,8.28e-07,22;UBERON:0010313,8.90e-07,10;UBERON:0002342,8.90e-07,10;UBERON:0005062,8.90e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,2.86235987131057,4.65373045247806,1.88313959392204,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.03988298880475,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.529636723252875,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.506328996723799,0.389748020644795,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.339121184620975,0.57978255948989,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.301586917234893,0.277765335475589,0,0,0,1.39116485970092,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,1.34385702559088,0.708875486211932,0.268675568108545,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,0,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.644566922551274,0.114814448164607,0,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.577566499444116,0.574265537996172,1.30012049207304,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0.267096106940212,0,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.430234056612155,0.294747123039363,0,0,0,0.329294892959902,0,0,0.384888450902048,0,0,0.282431402330337,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,4.05865624054073,4.15750553165694,5.83605333988541,0,0,0,0,0,0.19924798825107,0,0,1.02268682502155,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,1.4793148277115,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,12.9664082179101,3.00106008164809,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,2.2562765983567,1.95984794828755,1.39294730528644,0.17472666824203,0,0,0,0,7.46815426960829,0,0,0,0,0,1.75996244461323,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.209205692624666,0.203996435272644,0.288950589901519,0,0,0,0,0,0.837847203816763,1.14580212005842,1.43574604915363,4.19325901047881,0.429226048136571,1.33902874465124,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0,2.0126081255956,0.788057072991982,0.209818352539992,0.105600336519406,0,0.383830394638891,0,1.98627591109629,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0.533937062838473,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.686520205190771,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,2.32815493405934,0,0.438568099157414,0,0,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0,0,0,0.159633859057151,0,0,0,0,0,1.66851121451744,0.235939446695481,2.75142897782519,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,1.48863353516788,0,3.32182311862948,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0.470958557103084,0,1.96190514319652,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,2.2910686854405,0,0,0.671132590786754,0,0,0.647428837187895,0.821302454849976,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,1.6906229103336,0.339854229375634,0,0,0,1.42843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| |||
|short_description=p9@RASAL2 | |||
}} |
Revision as of 22:28, 10 January 2014
Short description: | p9@RASAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RASAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000462775, NM_004841, uc001glr.2_5end |
EntrezGene: | RASAL2 |
HGNC: | 9874 |
UniProt: | Q9UJF2A8K2P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.10e-14 | 3 |
oligodendrocyte | 2.37e-10 | 7 |
macroglial cell | 2.37e-10 | 7 |
astrocyte | 2.37e-10 | 7 |
oligodendrocyte precursor cell | 2.37e-10 | 7 |
amnion mesenchymal stem cell | 4.25e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
pharynx | 3.22e-10 | 11 |
chordate pharynx | 1.85e-07 | 10 |
pharyngeal region of foregut | 1.85e-07 | 10 |
uterine cervix | 2.24e-07 | 6 |
neck of organ | 2.24e-07 | 6 |
tongue | 2.67e-07 | 3 |
gustatory system | 2.67e-07 | 3 |
future tongue | 2.67e-07 | 3 |
ectoderm-derived structure | 4.18e-07 | 171 |
ectoderm | 4.18e-07 | 171 |
presumptive ectoderm | 4.18e-07 | 171 |
embryonic uterus | 7.75e-07 | 22 |
oral opening | 8.28e-07 | 22 |
neural crest-derived structure | 8.90e-07 | 10 |
neural crest | 8.90e-07 | 10 |
neural fold | 8.90e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.35e-10 | 14 |