FFCP PHASE1:Hg19::chr1:169652514..169652517,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_at_chr1:169652514..169652517,+ | |||
|id=chr1:169652514..169652517,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.44e-31!18;CL:0000789!1.44e-31!18;CL:0002420!1.44e-31!18;CL:0002419!1.44e-31!18;CL:0000790!1.44e-31!18;CL:0000838!4.85e-29!52;CL:0000542!2.28e-28!53;CL:0000051!2.28e-28!53;CL:0000084!9.79e-22!25;CL:0000827!9.79e-22!25;CL:0000624!8.13e-20!6;CL:0000625!1.10e-16!11;CL:0002087!8.36e-16!119;CL:0000738!2.53e-12!140;CL:0002031!1.82e-11!124;CL:0000898!7.79e-11!3;CL:0000842!1.39e-09!3;CL:0000037!1.05e-08!172;CL:0000566!1.05e-08!172;CL:0000815!4.95e-08!2;CL:0000792!4.95e-08!2;CL:0002677!4.95e-08!2;CL:0000988!7.50e-08!182;CL:0000224!2.74e-07!4;CL:0000945!3.24e-07!24;CL:0000826!3.24e-07!24;CL:0002032!4.66e-07!165;CL:0000837!4.66e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000815;1.60e-31;2!CL:0000792;1.60e-31;2!CL:0002677;1.60e-31;2!CL:0000624;1.40e-23;6!CL:0000898;2.17e-21;3!CL:1001319;2.08e-16;1!CL:1000600;2.08e-16;1!CL:0000791;2.81e-08;18!CL:0000789;2.81e-08;18!CL:0002419;2.81e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.17e-31,2;CL:0000792,1.17e-31,2;CL:0002677,1.17e-31,2;CL:0000624,1.24e-23,6;CL:0000898,1.76e-21,3;CL:1001319,3.07e-16,1;CL:1000600,3.07e-16,1;CL:0000791,2.71e-08,18;CL:0000789,2.71e-08,18;CL:0002420,2.71e-08,18;CL:0002419,2.71e-08,18;CL:0000790,2.71e-08,18;CL:0000838,2.49e-07,52;CL:0000542,3.43e-07,53;CL:0000051,3.43e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.81e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.22e-10!7;UBERON:0002370!2.29e-07!4;UBERON:0005058!2.29e-07!4;UBERON:0009113!2.29e-07!4;UBERON:0003295!2.29e-07!4;UBERON:0005562!2.29e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.08e-16;1!UBERON:0001256;2.08e-16;1!UBERON:0001259;2.08e-16;1!UBERON:0001255;7.21e-09;2!UBERON:0000007;7.21e-09;2!UBERON:0001556;7.21e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.07e-16,1;UBERON:0001256,3.07e-16,1;UBERON:0001259,3.07e-16,1;UBERON:0000007,5.94e-09,2;UBERON:0001255,8.74e-09,2;UBERON:0001556,8.74e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.57470412614962,0.393553906568396,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.651032612147555,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0,2.16380747125216,0.786021525498329,0.411202997999018,0.501559486172034,4.56291173287027,4.73447805734733,3.89653456815823,0.334231370655521,1.47302953737419,1.32920336750173,4.06205795647523,2.30564375506215,4.1618991219161,0,0,0,0,0,0,0,0.383220493601921,0.68725489096526,0,0.637130828648193,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,1.82129753081038,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0,0,0,0,0.471464371102113,0,0,1.05824249194267,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p@chr1:169652514..169652517,+ | |||
}} |
Revision as of 22:11, 10 January 2014
Short description: | p@chr1:169652514..169652517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:169652514..169652517, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.17e-31 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.17e-31 | 2 |
naive regulatory T cell | 1.17e-31 | 2 |
CD4-positive, alpha-beta T cell | 1.24e-23 | 6 |
naive T cell | 1.76e-21 | 3 |
bladder cell | 3.07e-16 | 1 |
lower urinary tract cell | 3.07e-16 | 1 |
mature alpha-beta T cell | 2.71e-08 | 18 |
alpha-beta T cell | 2.71e-08 | 18 |
immature T cell | 2.71e-08 | 18 |
mature T cell | 2.71e-08 | 18 |
immature alpha-beta T cell | 2.71e-08 | 18 |
lymphoid lineage restricted progenitor cell | 2.49e-07 | 52 |
lymphocyte | 3.43e-07 | 53 |
common lymphoid progenitor | 3.43e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.07e-16 | 1 |
wall of urinary bladder | 3.07e-16 | 1 |
mucosa of urinary bladder | 3.07e-16 | 1 |
pituitary gland | 5.94e-09 | 2 |
urinary bladder | 8.74e-09 | 2 |
lower urinary tract | 8.74e-09 | 2 |