FFCP PHASE1:Hg19::chr1:157015588..157015631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14580 | |||
|TSSclassifier=weak | |||
|UniProt=O15085 | |||
|association_with_transcript=-426bp_to_ENST00000368194,NM_014784,NM_198236,uc001fqn.2,uc001fqo.2_5end | |||
|description=CAGE_peak_2_at_ARHGEF11_5end | |||
|id=chr1:157015588..157015631,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.58e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.73e-27!115;UBERON:0000073!1.03e-23!94;UBERON:0001016!1.03e-23!94;UBERON:0003075!2.05e-23!86;UBERON:0007284!2.05e-23!86;UBERON:0000062!3.57e-23!511;UBERON:0002346!3.81e-23!90;UBERON:0001017!1.05e-22!82;UBERON:0001049!1.56e-22!57;UBERON:0005068!1.56e-22!57;UBERON:0006241!1.56e-22!57;UBERON:0007135!1.56e-22!57;UBERON:0005743!2.00e-22!86;UBERON:0000955!1.43e-21!69;UBERON:0006238!1.43e-21!69;UBERON:0000924!3.57e-20!173;UBERON:0006601!3.57e-20!173;UBERON:0004121!4.40e-20!169;UBERON:0002616!3.50e-19!59;UBERON:0000468!3.52e-17!659;UBERON:0000922!1.93e-16!612;UBERON:0003080!3.20e-16!42;UBERON:0000033!3.25e-16!123;UBERON:0002780!6.14e-16!41;UBERON:0001890!6.14e-16!41;UBERON:0006240!6.14e-16!41;UBERON:0000467!1.04e-14!625;UBERON:0000480!1.11e-14!626;UBERON:0000153!1.73e-14!129;UBERON:0007811!1.73e-14!129;UBERON:0002050!2.22e-14!605;UBERON:0005423!2.22e-14!605;UBERON:0000923!3.56e-14!604;UBERON:0005291!3.56e-14!604;UBERON:0006598!3.56e-14!604;UBERON:0002532!3.56e-14!604;UBERON:0003056!5.61e-14!61;UBERON:0002020!1.29e-13!34;UBERON:0003528!1.29e-13!34;UBERON:0001893!1.88e-13!34;UBERON:0002791!6.01e-13!33;UBERON:0001869!7.48e-13!32;UBERON:0002619!1.13e-11!22;UBERON:0001950!7.85e-11!20;UBERON:0000956!4.65e-10!25;UBERON:0000203!4.65e-10!25;UBERON:0003076!1.45e-07!15;UBERON:0003057!1.45e-07!15;UBERON:0000481!5.40e-07!347;UBERON:0004732!7.80e-07!13;UBERON:0000475!9.16e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.49e-12;53!UBERON:0002616;1.49e-12;53!UBERON:0002780;1.91e-12;41!UBERON:0001890;1.91e-12;41!UBERON:0002619;2.17e-12;22!UBERON:0003528;8.16e-12;34!UBERON:0002020;8.16e-12;34!UBERON:0001869;1.28e-11;32!UBERON:0001893;1.38e-11;34!UBERON:0001950;2.34e-11;20!UBERON:0002791;2.45e-11;32!UBERON:0000956;3.33e-10;25!UBERON:0000203;3.33e-10;25!UBERON:0001016;3.45e-10;83!UBERON:0001017;7.78e-10;75!UBERON:0000955;8.28e-10;68!UBERON:0007023;6.42e-08;114!UBERON:0004732;4.41e-07;13!UBERON:0000922;9.44e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.83e-29,114;UBERON:0001016,8.28e-25,89;UBERON:0001049,1.07e-23,56;UBERON:0005068,1.07e-23,56;UBERON:0006241,1.07e-23,56;UBERON:0007135,1.07e-23,56;UBERON:0001017,1.96e-23,81;UBERON:0002346,6.98e-23,86;UBERON:0003075,7.02e-23,82;UBERON:0007284,7.02e-23,82;UBERON:0000073,2.66e-22,53;UBERON:0002616,2.66e-22,53;UBERON:0000955,5.13e-22,68;UBERON:0006238,5.13e-22,68;UBERON:0004121,5.97e-19,171;UBERON:0000924,5.97e-19,171;UBERON:0006601,5.97e-19,171;UBERON:0010371,1.79e-17,104;UBERON:0002780,7.72e-17,41;UBERON:0001890,7.72e-17,41;UBERON:0003080,7.72e-17,41;UBERON:0006240,7.72e-17,41;UBERON:0011216,1.38e-16,223;UBERON:0010314,2.50e-15,132;UBERON:0003056,1.67e-14,61;UBERON:0003528,2.63e-14,34;UBERON:0002020,2.63e-14,34;UBERON:0001893,3.93e-14,34;UBERON:0001869,1.77e-13,32;UBERON:0002791,3.36e-13,32;UBERON:0002619,1.40e-12,22;UBERON:0000922,3.64e-12,592;UBERON:0001950,1.15e-11,20;UBERON:0000956,1.92e-10,25;UBERON:0000203,1.92e-10,25;UBERON:0005423,7.79e-10,581;UBERON:0000923,8.46e-10,560;UBERON:0010316,8.46e-10,560;UBERON:0005291,8.46e-10,560;UBERON:0006598,8.46e-10,560;UBERON:0010317,8.46e-10,560;UBERON:0002532,8.46e-10,560;UBERON:0002050,2.00e-09,564;UBERON:0003076,4.17e-08,15;UBERON:0003057,4.17e-08,15;UBERON:0004732,2.60e-07,13;UBERON:0004733,8.61e-07,12;UBERON:0002028,8.61e-07,12;UBERON:0007277,8.61e-07,12 | |||
|phase1_expression=1.45342703416445,0.856402095563933,0.986680828671798,1.0007329835313,0.893922188854576,0.872338524100369,0,1.26343974685366,2.08948502559871,0.737201809504527,0,2.62129646556207,2.37390280405608,0.247532705920093,0.662794751455832,0.672325146451775,1.20538905604795,0.730310090387373,0,1.72369481307503,2.24400760368678,2.5076377718247,0.572471974262113,0.821246550437305,1.50651167513763,0.61130724598361,1.06730766284929,0.865818594450472,1.96682138424452,0.383829398097213,1.39334510984468,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0.587200878669695,2.21598163412751,3.00816671205213,3.25516306073778,3.58264758783879,3.88672399222775,6.18181362322048,3.05336301437086,0.377875943688809,2.42584061187816,1.39457422143411,1.23350366406548,0.619412741790207,2.58923153089935,3.33008918487831,1.41889337933151,1.37898272294647,0.645484683583826,0,2.25890807451126,2.18324920046277,0.898893937780338,0.918251677112708,0.962787081228281,1.27867425159808,4.61791820261403,3.39088217956774,3.83602275479425,1.45104619314292,1.13477044938228,0,4.01997864410789,5.21482918420201,1.95469960234605,1.21079900526674,1.84138817993782,0.632924774881769,0.633765858935825,0.425208599930087,0.419317291016752,0.786300418025466,1.95229960693958,1.92870704036496,0.285012743741249,0,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.383959833463255,1.24930726552346,0,0,0,0,0.144824403882799,0,0.670700859703636,0.895037932904712,1.0843174571537,1.00267582127178,0.724232594804119,3.1811437882044,0.973269740605272,1.41802225746102,1.10864698731282,1.31752178539689,4.12584087817795,1.82147644146271,0,1.9472843619281,1.56716763569341,1.19662164466979,0,0,0.371457501329565,0.39752481473341,0,0.694281003215189,1.13061588384802,1.67799774483962,0.275118041940067,0.835979866147242,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,0.732186172644509,0.367663080345869,0,0.714397826272638,1.57170560838319,0.788280363383256,1.53316637465883,0,0.732806975721629,0,0,0.872188104285069,1.98788780678127,1.2663051166458,1.32409180813219,1.72101972449288,1.06400514659507,1.12135520028461,2.1349799145941,0.49333509683432,2.17847724779836,0.67355336034844,1.47115712802113,1.81628913173918,0.576175924479999,0.937285727335186,0.624320153660641,0.570471821544449,0.597794722207204,0.822041490506354,0.809364721840658,0.702254033511242,0.408308342509787,0.859840221182376,1.75653827998801,1.18800285728205,0.494533858557114,0,0,0.841680569770331,1.12606667884768,0.277064115484183,1.75591048352335,1.5324389789951,1.95309476578576,1.24775401476023,1.97328599257748,1.2813443329114,1.27159140695737,1.50045548042201,0.618315175430633,1.54584324027377,0.558350568994769,1.35021065793013,0.194874010322397,1.7670364197088,1.10459878370759,0.80823028409406,1.42003837006646,1.0075209822764,0.508681776931463,1.15956511897978,0.545492241181669,0.573609190778008,2.31750041646231,3.18071443971565,2.32387885739037,3.52447587052259,2.01856680700503,5.10968302706162,0,1.28648187638577,1.38134921352481,0.928735856063958,0.721879481669586,0.473227200159376,0.505754070234305,1.20505514941741,0.882351781859152,0.435758888184812,0.474541238222193,0.674156540800822,0.588664395376038,1.15424147083917,1.4763109092493,0,0.4115740113314,0,1.26755034821831,3.9313088667105,1.18157981336281,0,2.45976877086227,0.857839051492628,1.31700342490351,1.1240175325762,1.20634766893957,0.555530670951178,1.95484983186195,1.03993478527958,1.44331342025273,1.39116485970092,0.939269553886573,0.577465791044295,0.462985512576611,0.380508304469197,1.58040879591855,2.57545848628462,2.70838706696137,1.63802985597466,4.45893486866185,0,0.335964256397719,0.708875486211932,0.626909658919938,0,0.383382679165211,0.492663237895943,1.05658120815871,1.24396869324463,1.58531948758658,1.2624243342638,1.58744735730423,2.29193055334967,3.51652341630141,0,2.46785982487976,1.20137223137567,2.5724378936752,1.23344192779897,3.05172048183296,0.66004457238855,1.03417372606222,3.57656445851882,0,0.797814349754612,1.04007436911366,1.02882949704857,1.41849132023278,1.8649552531127,0.428933980974443,3.25572963234866,0,0.977208552881205,0.710783897485092,0.791951872933429,1.20575750823834,0,1.79951384127703,4.86495122564762,2.00902836572851,2.10833939483032,0.239624855491583,1.14861935834114,4.27910715122155,0.579125226670317,1.02738161275192,1.07436577943937,0,0,0,0.256686072559497,1.77866236955724,2.60279707715243,0,3.18280904135263,0.637938751653163,0.749007023947182,0,0.414415513436035,1.34960640891054,1.50051156317903,0.271265023699736,1.03985430765404,1.78428988797162,0.315404830067869,0.819989904948992,0.902838299183157,0,1.03473071292505,0.664225598535437,1.47495334833363,1.30325421702124,1.76221041716467,1.37257369524342,1.44737618286021,1.2942852049117,0.533637789017222,0.606255142892519,0,1.20956117331872,0.992431231275107,1.68808170616869,0.561320188866147,1.02511319404561,0.511707249066704,1.12597744800525,0,0.925258162815933,1.06537035187876,0.574890092096664,1.55776328755086,0.697262270759755,2.41718899183244,0,0.828728900423067,0.803701137152247,0.728364672026868,0.524497659837696,1.80479845162965,0.15403067420883,0,0,0.316654886678627,0,0.850468526382578,0.215915916102139,0,2.16757150035082,0,1.52925763827023,0,1.11937377361089,0,0,0.769350375349168,3.60816110269676,0.325378394664303,2.98818933778395,1.83138929636687,2.0627374980147,0,0,3.21367859688319,1.06337790121334,0.616194468458578,0.307007349452259,0.413509717453592,0.859361958946189,1.16013355131383,1.02271952899321,0.979352392114111,0.661139661443912,0.576570202095319,2.04180339991335,1.71968227454435,0,0.94443704049192,0.6970372701606,1.23213432070436,1.59691809095107,0.869932992075073,1.29726953372744,0.715624433709956,1.116475108079,0.949138274156178,0.762520775695299,1.27948895655667,0.42793898803392,0.95460974377781,0,0.539617372749944,1.37268514868027,0.942499218765491,1.01091240786658,0,0.842516912477962,1.46290121726877,0.243713489631284,0,1.36499911407986,0.989838023675989,2.26016233240486,0.551365343546124,0,0.438450885253763,1.73632660280006,1.31178950409327,0.811641507850816,0.6196469961995,0.563391205064483,0.860468113224309,0.491245205065606,1.07001315444375,0.709522128141196,1.68886108238131,1.97576935775941,1.13841952129715,2.44954304171488,0.0962221127255121,0,1.08890984861323,2.2594512186427,0.86101074534246,0,0.443430153536676,0.918893600827838,1.01489521846434,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,1.6023610669121,8.66231869737023,1.47024129588619,0.185803175125719,0,0,0.318852545457645,0.199579371432817,0.766021480529467,0,0,1.12318871245384,0.684704037099577,0.156679895773023,0,0,0.321176150207399,1.21079824314629,0.851692475380653,0.343505344755765,1.53620382154229,1.11838053946208,1.00109485027145,0.390776190804081,1.11362469558097,1.23087398947712,0.270455678475983,0,4.22961015263549,3.18138918693974,2.93016358543788,4.85442086998054,0,1.70481688083848,0.47748896947538,2.37571744666111,3.07160702099232,1.9882952955326,4.92342957436795,1.00177834520615,1.97764649072111,2.74463030566391,2.59022384726391,4.14425873296722,0,2.55671706255387,0.492339221844278,0.311039587661807,0.718946809178615,0.716084698702437,0.511572370226872,3.74844941420348,0,1.11136990144637,3.87733098438087,4.36010061360701,7.98455192004777,2.08342208868187,2.27395999990109,2.89999830173917,1.593108275997,0,1.89110145414349,1.03423011972439,0,4.34062487333231,1.77148277162768,4.82385754501632,4.5774520895125,7.74054819518572,4.43321428430321,4.16832254592548,0.435753854075961,1.25481369850743,4.92481654424301,2.73460934032803,3.68902247020896,1.88491053260521,6.62748968724249,1.5950057986596,1.00757352742049,2.13213910407454,0,0.784901281975124,1.32969345520125,0.902382642468723,0.588187602953219,1.00692952185506,0.948768663620925,0.635746315921515,0.843992258112108,0.489698424477443,3.39247371441458,1.08194319871046,4.97630965539252,3.27292988662355,6.11030144933625,0.889563386041866,0.494255755786011,0.835375596043643,3.37005664903385,6.42062117839031,2.10838001152805,0,0.782658475728359,2.18502341580683,5.12959723704208,2.41981432097328,3.36680037793539,2.96976924253893,1.50323419414493,1.14057010536972,2.65861549082874,0.992975867626496,2.82539626566503,5.97362148864794,3.13070500632772,2.63481878724963,0.867798691675654,1.95984794828755,0.69647365264322,1.22308667769421,1.20390222730132,1.25783230675811,1.16942907337897,0.739039113478883,2.42472541221049,2.02989091390451,7.00540296419651,0.685209623233754,0.596143835108969,4.17851253308799,3.71547627196126,1.20238230377301,3.62870091056899,0.799238438328521,2.88180834308212,3.43609788497747,2.4023299700675,0.288109595976299,0.99402028452346,4.00679858848552,3.39760515184035,2.40586546518366,0.407992870545287,1.15580235960608,4.20294202096853,4.24406674565178,7.66479528401834,2.14882720709979,0.262887354279314,4.18923601908381,4.58320848023367,7.17873024576814,2.79550600698588,4.29226048136571,3.79391477651183,3.76227445925667,1.80149941771202,6.98975697164723,1.26053091691558,1.89556474276683,1.88729922791718,2.95282444544246,0.338693328263138,3.18091875923721,5.0395260261283,1.60753148465019,1.65047323916681,1.66176135211674,0,1.5476039091159,4.25246896606173,0.670869375198532,2.44297692627514,2.7800931711549,2.00640639386872,1.25501137532991,1.34340638123612,2.85878130549347,1.98627591109629,2.034148301238,0.542999601753713,0,0,3.59190574687462,0.82092520749339,3.40776043570843,1.69968137280189,0.879313402068495,1.32506888912221,4.78346938537737,4.76037366273684,2.56630256826494,2.81926008926669,1.49502377594773,2.04365596629566,4.14239055347196,0.992332043623902,0.988058159489721,0.60896299190448,0.638341257770182,5.98419583706421,3.5096585163178,3.36980134439808,2.95085367638824,2.04170325125305,2.65820453990096,3.90484047686282,6.38473746603149,6.88091034828085,3.43880059764242,3.97416978824854,3.32036723846954,2.99952979109056,5.00442087887438,1.42732666772484,0.941063278792687,4.21501415226193,1.01444720027578,0.895528817321244,1.16856654923612,1.10961172300523,1.51522404220071,0,1.77962244319307,1.14420034198462,1.36107831386915,0.932623203496683,1.18284119991707,0.796483835818512,2.69881867298163,0.465788870628778,0.414706207840855,0.797525143673985,0.521745061811734,0.901545653983311,0,0.406870733204662,0.545545977607678,1.18151612746737,1.39210127963548,0.398095888698616,0,1.37358282073117,0.673498977531838,3.78554694685953,3.27453711692416,2.35885750512418,1.56596575179127,0.453411851024545,2.08370226891451,0.97894681802587,0.895444205407437,0.926404341482917,0.877136198314828,0.176689145945881,0.964570191354574,1.01365464391844,1.53744911152768,1.38172136692479,1.82315973706429,5.53033744606923,0.194860308839388,0,0.327130788511688,0.327609848846413,0.491545817507439,5.07149096060705,0.19998739585493,0.746842107858986,0,2.83757976783418,4.41854280604418,0.279759015438889,0.622077260032973,2.04630994085843,7.22426236357768,1.25812753484717,1.63814457288021,1.18812770967818,7.01497236335553,2.60265104943905,1.67593475391973,1.90802610392051,0.23658523500376,0.80057074828547,2.1160556621441,0.918736432059601,4.30335808146279,1.41696576325585,5.74681892605745,3.89721092057435,5.79764901309952,7.60729777106397,5.81312324274664,4.28308260777463,2.45369296252564,0.825788063434183,1.10057159113007,0.577628330751691,1.90691047733584,2.7614397042404,8.35448132888354,3.61009576076435,1.81534561833168,0,5.23813388962845,1.63771917510097,2.66140955190681,4.66009333866923,5.46754669029693,6.20060389503552,5.77083872764552,11.4864709893826,2.19303106742873,3.47347824872506,0,0.894336993477167,14.999651404592,26.2301303330683,1.21393120847326,7.51285231459282,3.81420191699347,0.576169937778896,1.8863681038116,4.89382077433188,5.13027633790223,0.945550727071746,1.4460082245969,3.68917536397416,3.61365856806804,5.88571542958957,7.30526976407596,0.431855182437243,1.9110067515482,5.43221735742588,3.47629945811999,0.929931402945002,7.64976398131349,1.60342272946051,2.07216164163037,1.87790324803345,7.60385627995501,2.58136415292167,1.30165200803622,1.95990830946063,2.9637093513365,3.2074961596167,1.24082554265728,0,2.12525320415805,1.27595303699816,0.975343399858155,3.88457302312737,2.25858175083743,5.799072156691,3.88568794447312,1.87151570769685,2.98426162742052,5.94600453887843,1.35535298446752,1.53916723443601,2.8682940277668,6.01958433241968,1.74847648403166,0,6.12870804384764,3.77082475362602,2.74831853960923,4.75274240523338,4.226557275834,1.69927114687817,1.87967835959707,1.80482086326016,0.999411559249289,2.49975514047921,1.05868461514708,0.641930933513346,5.11235471772562,0.917458566809082,2.72345207987757,3.62874593044325,5.23534474470043,11.7814686391902,1.0580536810308,1.11598505450025,0.462175628631418,0.432626562123789,2.3971620718665,3.71502944676565,3.29416102629736,4.4875085086472,1.3360870263278,4.31906027813771,1.75495277504663,3.10692662694782,1.87574891109325,3.31667775783512,3.51672185930444,1.91910583710883,2.3806443146374,0.193766729508018,0.434523000071005,1.34558235096736,3.56424086357723,3.23387502333151,2.39488422686657,4.10679961302337,1.88585748440845,2.86888821570705,2.99394320891412,1.95367844666339,2.02781957167659,5.7921684686082,2.87440646741078,0,3.30051899293739,2.03448089157869,7.32332451604064,2.61655931668334,0.641136984606466 | |||
|short_description=p2@ARHGEF11 | |||
}} |
Revision as of 21:31, 10 January 2014
Short description: | p2@ARHGEF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF11_5end |
Coexpression cluster: | NA |
Association with transcript: | -426bp_to_ENST00000368194, NM_014784, NM_198236, uc001fqn.2, uc001fqo.2_5end |
EntrezGene: | ARHGEF11 |
HGNC: | 14580 |
UniProt: | O15085 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data