FFCP PHASE1:Hg19::chr1:156933561..156933592,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14580 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000486670_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_ARHGEF11_5end | |||
|id=chr1:156933561..156933592,- | |||
|ontology_enrichment_celltype=CL:0000738!4.93e-58!140;CL:0002087!6.27e-57!119;CL:0000037!1.61e-47!172;CL:0000566!1.61e-47!172;CL:0002031!3.55e-47!124;CL:0002032!3.73e-46!165;CL:0000837!3.73e-46!165;CL:0000988!2.31e-43!182;CL:0000766!1.06e-41!76;CL:0002194!1.57e-39!63;CL:0000576!1.57e-39!63;CL:0000040!1.57e-39!63;CL:0000559!1.57e-39!63;CL:0002057!7.65e-39!42;CL:0002009!1.37e-37!65;CL:0000860!5.89e-35!45;CL:0000839!3.09e-33!70;CL:0000557!1.92e-32!71;CL:0000763!9.65e-29!112;CL:0000049!9.65e-29!112;CL:0000542!2.39e-15!53;CL:0000051!2.39e-15!53;CL:0000838!8.80e-15!52;CL:0000134!9.87e-11!358;CL:0002320!7.39e-10!365;CL:0002393!2.55e-08!9;CL:0002397!2.55e-08!9;CL:0000084!2.95e-08!25;CL:0000827!2.95e-08!25;CL:0000236!3.48e-08!14;CL:0000094!3.65e-08!8;CL:0000219!4.33e-08!390;CL:0000791!7.84e-08!18;CL:0000789!7.84e-08!18;CL:0002420!7.84e-08!18;CL:0002419!7.84e-08!18;CL:0000790!7.84e-08!18;CL:0000945!5.25e-07!24;CL:0000826!5.25e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.10e-52;33!CL:0002057;6.10e-52;33!CL:0000473;1.83e-49;39!CL:0000234;1.83e-49;39!CL:0000576;5.10e-42;48!CL:0000766;2.52e-31;69!CL:0002087;7.50e-19;104!CL:0000738;1.47e-17;136!CL:0000763;1.07e-15;100!CL:0000094;4.64e-11;8!CL:0000988;5.74e-10;177!CL:0000235;3.18e-08;6!CL:0000081;1.10e-07;11!CL:0000219;1.33e-07;193!CL:0000775;2.22e-07;3!CL:0002393;5.16e-07;6!CL:0002397;5.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.16e-77,72;CL:0002194,2.27e-74,59;CL:0000576,2.27e-74,59;CL:0000040,2.27e-74,59;CL:0000559,2.27e-74,59;CL:0000473,4.22e-74,48;CL:0000234,4.22e-74,48;CL:0002009,2.05e-71,61;CL:0000738,8.63e-71,136;CL:0002087,2.14e-68,115;CL:0000860,3.90e-67,42;CL:0002057,3.90e-67,42;CL:0000839,8.40e-65,66;CL:0000557,1.35e-63,67;CL:0002031,1.00e-58,120;CL:0000037,4.52e-56,168;CL:0002032,2.50e-54,161;CL:0000837,2.50e-54,161;CL:0000988,4.84e-52,177;CL:0000763,2.90e-49,108;CL:0000049,2.90e-49,108;CL:0000134,8.94e-15,354;CL:0002320,4.48e-14,361;CL:0000219,1.23e-11,386;CL:0002393,2.41e-11,9;CL:0002397,2.41e-11,9;CL:0000094,5.83e-11,8;CL:0000048,9.94e-09,427;CL:0000723,2.45e-08,433;CL:0000235,3.17e-08,6;CL:0000034,7.81e-08,441;CL:0000081,1.29e-07,11;CL:0000775,2.20e-07,3;CL:0000542,5.89e-07,53;CL:0000051,5.89e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-47;42!CL:0000049;1.63e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-40!112;UBERON:0002390!6.83e-40!102;UBERON:0003061!6.83e-40!102;UBERON:0002371!2.66e-27!80;UBERON:0002405!1.01e-26!115;UBERON:0001474!7.71e-24!86;UBERON:0004765!6.21e-18!101;UBERON:0001434!6.21e-18!101;UBERON:0003081!2.25e-11!216;UBERON:0000178!2.45e-09!15;UBERON:0000179!2.45e-09!15;UBERON:0000463!2.45e-09!15;UBERON:0002384!4.15e-09!375;UBERON:0007023!4.97e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-14;15!UBERON:0000179;1.05e-14;15!UBERON:0000463;1.05e-14;15!UBERON:0002390;4.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.22e-71,98;UBERON:0003061,2.22e-71,98;UBERON:0002193,6.03e-65,108;UBERON:0002371,3.59e-54,76;UBERON:0002405,1.63e-50,93;UBERON:0001474,4.92e-49,82;UBERON:0004765,2.99e-43,90;UBERON:0001434,2.50e-37,100;UBERON:0003081,3.62e-25,203;UBERON:0002204,3.26e-16,167;UBERON:0000178,9.42e-15,15;UBERON:0000179,9.42e-15,15;UBERON:0000463,9.42e-15,15;UBERON:0002384,9.85e-14,371;UBERON:0000926,9.70e-10,315;UBERON:0004120,9.70e-10,315;UBERON:0006603,9.70e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.18009283054671,0.767658796194425,1.23852898652861,0,0,0,1.93668001450754,0.710846162437108,0,1.66198622559563,2.00544447470142,0.868043482863407,12.0914356089559,6.47787332037959,7.7272670290256,9.74168199823083,6.42389104270976,6.79235371325885,7.20530014407622,8.22335776043652,6.50383378879718,7.76769459269806,13.3203567395132,7.56743135643473,2.75796544589295,5.16387746867061,4.06279459783025,7.71793592124679,9.82462140208245,4.26974620445661,12.8555234795779,14.7627352455003,10.2293940127847,6.59702600373432,12.5662104301628,6.81959600852311,22.346111374401,11.9150897185139,18.0618452208717,10.80369260604,11.4726242052444,6.73285418585862,29.0591761264017,29.0939332430176,16.1395817594851,5.70389273042243,4.25208599930087,3.56419697364239,4.83013113929929,4.8056605709282,3.69668849403284,4.27519115611873,4.77400025277816,5.29726045917438,1.75996244461323,2.18455444504853,0.889509253863555,2.13365111283254,0.400395987036012,2.29900975981793,1.32208974556972,0.954053754535364,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.983548850569165,0.393010762749165,0.616804496998528,5.51715434789238,0.651844533267181,1.4203434172042,0,1.89397776704795,2.94605907474837,1.99380505125259,2.43723477388514,4.09892223122161,2.34106825607781,1.47994114143309,0.552700035571697,2.02862160014537,2.07601188426885,2.40786745280742,2.09071047609954,4.07913633711238,1.91610246800961,3.09264700934367,1.77113784413652,2.54852331459277,0.651083453856419,0,1.80690142893327,2.17577238962511,0,3.31488152861624,1.64225599384209,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,4.21911611751088,4.87563264437948,10.9025527625469,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0,0,0,12.8032843165447,10.9982004615442,6.98566462757023,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,7.5338563714819,0,0,0,0,0,0,0.179060963239896,2.24170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,42.6934003649894,17.9496875522415,64.2344045825855,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,4.54889657470352,2.5885704098234,0.960548020230999,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,20.2979043692868,18.351292971417,22.7858874869665,17.8673831593342,22.2135627466545,35.0175588044067,19.9811631778102,26.1731308177109,0,0,0,1.48642540100575,0.721346064882224,2.20539714380084,3.50737800003409,0.199579371432817,0,0,0,0,0.228234679033192,0,2.50634477090067,0,0.321176150207399,0.201799707191048,0.425846237690326,0,0.307240764308458,0.447352215784832,0,0.390776190804081,0,0,0,0,0,0,2.19762268907841,0,3.12041475976939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,1.02314474045374,0.493217028184668,14.3689855408164,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0,0,1.64209310294099,0,0,0,0,0.30607276163049,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0.129282956361551,0,0,0,1.06787412567695,0.157204305099666,2.07119527673598,1.9846640872478,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,1.0362910251936,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,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| |||
|short_description=p4@ARHGEF11 | |||
}} |
Revision as of 21:31, 10 January 2014
Short description: | p4@ARHGEF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF11_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -3bp_to_ENST00000486670_5end |
EntrezGene: | ARHGEF11 |
HGNC: | 14580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.22e-71 | 98 |
blood island | 2.22e-71 | 98 |
hemolymphoid system | 6.03e-65 | 108 |
bone marrow | 3.59e-54 | 76 |
immune system | 1.63e-50 | 93 |
bone element | 4.92e-49 | 82 |
skeletal element | 2.99e-43 | 90 |
skeletal system | 2.50e-37 | 100 |
lateral plate mesoderm | 3.62e-25 | 203 |
musculoskeletal system | 3.26e-16 | 167 |
blood | 9.42e-15 | 15 |
haemolymphatic fluid | 9.42e-15 | 15 |
organism substance | 9.42e-15 | 15 |
connective tissue | 9.85e-14 | 371 |
mesoderm | 9.70e-10 | 315 |
mesoderm-derived structure | 9.70e-10 | 315 |
presumptive mesoderm | 9.70e-10 | 315 |