FFCP PHASE1:Hg19::chr1:155180354..155180367,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7504 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-271bp_to_ENST00000495589_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_MTX1_5end | |||
|id=chr1:155180354..155180367,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.65e-48!76;CL:0002057!1.53e-47!42;CL:0000860!7.25e-46!45;CL:0002194!3.82e-40!63;CL:0000576!3.82e-40!63;CL:0000040!3.82e-40!63;CL:0000559!3.82e-40!63;CL:0002009!1.70e-38!65;CL:0000839!8.71e-35!70;CL:0000557!4.16e-34!71;CL:0000738!1.27e-31!140;CL:0000763!1.56e-30!112;CL:0000049!1.56e-30!112;CL:0002087!1.65e-27!119;CL:0000037!1.26e-24!172;CL:0000566!1.26e-24!172;CL:0002032!3.65e-23!165;CL:0000837!3.65e-23!165;CL:0000988!2.97e-22!182;CL:0002031!4.05e-22!124;CL:0000094!3.15e-15!8;CL:0000081!1.54e-10!11;CL:0000134!3.46e-07!358;CL:0002320!3.72e-07!365;CL:0000775!5.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.75e-53;33!CL:0002057;4.75e-53;33!CL:0000473;7.62e-36;39!CL:0000234;7.62e-36;39!CL:0000094;2.06e-28;8!CL:0000576;3.35e-26;48!CL:0000766;2.00e-23;69!CL:0000081;2.09e-20;11!CL:0000775;2.44e-15;3!CL:0000771;5.40e-11;2!CL:0000763;9.15e-11;100!CL:0002087;6.09e-07;104!CL:0000767;8.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-46,42;CL:0002057,1.13e-46,42;CL:0000766,5.11e-46,72;CL:0000473,3.41e-40,48;CL:0000234,3.41e-40,48;CL:0000763,2.35e-33,108;CL:0000049,2.35e-33,108;CL:0002194,4.01e-31,59;CL:0000576,4.01e-31,59;CL:0000040,4.01e-31,59;CL:0000559,4.01e-31,59;CL:0002009,5.92e-30,61;CL:0000094,1.95e-28,8;CL:0000839,2.46e-27,66;CL:0000557,7.40e-27,67;CL:0000738,4.40e-25,136;CL:0000037,3.38e-22,168;CL:0002032,9.13e-22,161;CL:0000837,9.13e-22,161;CL:0000988,1.04e-20,177;CL:0000081,2.01e-20,11;CL:0002087,9.46e-17,115;CL:0000775,2.45e-15,3;CL:0002031,2.70e-14,120;CL:0000771,5.54e-11,2;CL:0000134,3.29e-08,354;CL:0002320,6.58e-08,361;CL:0000219,7.56e-07,386;CL:0000767,7.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-34;42!CL:0000049;2.59e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.55e-42!102;UBERON:0003061!4.55e-42!102;UBERON:0002193!4.78e-40!112;UBERON:0002371!9.01e-29!80;UBERON:0001474!7.62e-26!86;UBERON:0004765!1.89e-22!101;UBERON:0001434!1.89e-22!101;UBERON:0002405!2.02e-20!115;UBERON:0000178!1.14e-16!15;UBERON:0000179!1.14e-16!15;UBERON:0000463!1.14e-16!15;UBERON:0003081!7.89e-14!216;UBERON:0002204!3.59e-13!167;UBERON:0002384!2.70e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.96e-31;15!UBERON:0000179;9.96e-31;15!UBERON:0000463;9.96e-31;15!UBERON:0002390;1.83e-12;32!UBERON:0002193;4.24e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.47e-41,98;UBERON:0003061,9.47e-41,98;UBERON:0002193,2.33e-36,108;UBERON:0000178,1.03e-30,15;UBERON:0000179,1.03e-30,15;UBERON:0000463,1.03e-30,15;UBERON:0002371,4.04e-23,76;UBERON:0001474,4.43e-21,82;UBERON:0004765,8.83e-19,90;UBERON:0002405,5.09e-18,93;UBERON:0003081,2.19e-17,203;UBERON:0001434,2.02e-16,100;UBERON:0000926,1.82e-09,315;UBERON:0004120,1.82e-09,315;UBERON:0006603,1.82e-09,315;UBERON:0002204,6.19e-08,167;UBERON:0002384,1.70e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.96682138424452,0.767658796194425,1.08371286321253,0,0,0,0,0,0,1.10799081706375,0,0.868043482863407,0,0.32389366601898,0,5.08893835728477,4.1566353805769,5.09426528494414,1.39457422143411,1.23350366406548,1.23882548358041,1.1507695692886,0.512321413058201,1.18241114944293,2.41321976515633,0.645484683583826,2.70852973188684,2.82363509313907,0.272906150057846,1.12361742222542,1.83650335422542,1.28371610830437,0,0.659702600373432,3.98927315243264,1.70489900213078,0.580418477257168,0,0,1.25624332628372,0.521482918420201,1.3031330682307,0.605399502633369,0.368277635987565,1.89877432464531,0,0,0.628975936525128,1.90958672949042,0.750884464207532,1.12507910687956,0.285012743741249,0.19891667719909,0.730656615058536,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0.301150238155546,0.127986611154418,0,1.18388626022008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,23.2668158488995,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2231896465739,11.966458368161,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,2.37285620900479,0.213455115606889,0,0,0,0.248107807818777,0,0.280660094433074,0,1.02341449813341,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,23.3425900246798,16.0573813499899,18.2287099895732,9.52927101831156,17.6885777427064,32.4236655596359,25.3814775501914,16.6556287021797,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.193373663920732,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MTX1 | |||
}} |
Revision as of 21:15, 10 January 2014
Short description: | p5@MTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MTX1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -271bp_to_ENST00000495589_5end |
EntrezGene: | MTX1 |
HGNC: | 7504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-46 | 42 |
myeloid leukocyte | 5.11e-46 | 72 |
defensive cell | 3.41e-40 | 48 |
phagocyte | 3.41e-40 | 48 |
myeloid cell | 2.35e-33 | 108 |
common myeloid progenitor | 2.35e-33 | 108 |
monopoietic cell | 4.01e-31 | 59 |
monocyte | 4.01e-31 | 59 |
monoblast | 4.01e-31 | 59 |
promonocyte | 4.01e-31 | 59 |
macrophage dendritic cell progenitor | 5.92e-30 | 61 |
granulocyte | 1.95e-28 | 8 |
myeloid lineage restricted progenitor cell | 2.46e-27 | 66 |
granulocyte monocyte progenitor cell | 7.40e-27 | 67 |
leukocyte | 4.40e-25 | 136 |
hematopoietic stem cell | 3.38e-22 | 168 |
hematopoietic oligopotent progenitor cell | 9.13e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.13e-22 | 161 |
hematopoietic cell | 1.04e-20 | 177 |
blood cell | 2.01e-20 | 11 |
nongranular leukocyte | 9.46e-17 | 115 |
neutrophil | 2.45e-15 | 3 |
hematopoietic lineage restricted progenitor cell | 2.70e-14 | 120 |
eosinophil | 5.54e-11 | 2 |
mesenchymal cell | 3.29e-08 | 354 |
connective tissue cell | 6.58e-08 | 361 |
motile cell | 7.56e-07 | 386 |
basophil | 7.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.47e-41 | 98 |
blood island | 9.47e-41 | 98 |
hemolymphoid system | 2.33e-36 | 108 |
blood | 1.03e-30 | 15 |
haemolymphatic fluid | 1.03e-30 | 15 |
organism substance | 1.03e-30 | 15 |
bone marrow | 4.04e-23 | 76 |
bone element | 4.43e-21 | 82 |
skeletal element | 8.83e-19 | 90 |
immune system | 5.09e-18 | 93 |
lateral plate mesoderm | 2.19e-17 | 203 |
skeletal system | 2.02e-16 | 100 |
mesoderm | 1.82e-09 | 315 |
mesoderm-derived structure | 1.82e-09 | 315 |
presumptive mesoderm | 1.82e-09 | 315 |
musculoskeletal system | 6.19e-08 | 167 |
connective tissue | 1.70e-07 | 371 |