FFCP PHASE1:Hg19::chr1:154832316..154832336,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6292 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UGI6 | |||
|association_with_transcript=0bp_to_ENST00000361147_5end | |||
|coexpression_cluster_id=C1464 | |||
|description=CAGE_peak_5_at_KCNN3_5end | |||
|id=chr1:154832316..154832336,- | |||
|ontology_enrichment_celltype=CL:0000945!2.09e-27!24;CL:0000826!2.09e-27!24;CL:0000542!1.57e-13!53;CL:0000051!1.57e-13!53;CL:0000838!3.42e-12!52;CL:0000785!1.36e-07!2;CL:0000955!1.36e-07!2;CL:0000818!1.36e-07!2;CL:0000954!1.36e-07!2;CL:0000816!1.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.26e-44;24!CL:0000542;2.61e-12;53!CL:0000785;2.28e-10;1!CL:0000819;2.28e-10;1!CL:0000946;2.62e-10;1!CL:0000786;2.62e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.31e-44,24;CL:0000826,1.31e-44,24;CL:0000838,1.63e-23,52;CL:0000542,4.91e-23,53;CL:0000051,4.91e-23,53;CL:0000785,6.53e-19,2;CL:0000955,6.53e-19,2;CL:0000818,6.53e-19,2;CL:0000954,6.53e-19,2;CL:0000816,6.53e-19,2;CL:0000817,6.17e-13,3;CL:0000819,2.28e-10,1;CL:0000946,2.74e-10,1;CL:0000786,2.74e-10,1;CL:0000980,2.74e-10,1;CL:0002087,1.82e-09,115;CL:0002031,5.40e-09,120;CL:0000738,1.03e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;6.24e-19;2!CL:0000051;2.61e-12;53!UBERON:0001045;2.62e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.41e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.97e-23;10!DOID:4960;7.40e-11;1!DOID:0070004;7.40e-11;1!DOID:630;1.19e-10;1!DOID:0050177;1.19e-10;1!DOID:0050427;1.19e-10;1!DOID:0060073;2.28e-10;1!DOID:8675;2.28e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.06e-23,10;DOID:4960,7.40e-11,1;DOID:0070004,7.40e-11,1;DOID:630,1.19e-10,1;DOID:0050177,1.19e-10,1;DOID:0050427,1.19e-10,1;DOID:0060073,2.28e-10,1;DOID:8675,2.28e-10,1;DOID:2531,3.48e-08,51;DOID:0060083,3.48e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.91e-18!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.91e-13;3!UBERON:0002372;2.08e-10;1!UBERON:0001961;2.08e-10;1!UBERON:0001744;2.08e-10;1!UBERON:0001042;2.08e-10;1!UBERON:0001735;2.08e-10;1!UBERON:0001154;2.62e-10;1!UBERON:0001153;2.62e-10;1!UBERON:0009854;2.62e-10;1!UBERON:0000029;3.78e-10;1!UBERON:0002405;2.58e-08;27!UBERON:0004177;3.10e-08;5!UBERON:0005057;3.10e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.79e-13,3;UBERON:0004854,3.79e-13,3;UBERON:0009034,3.79e-13,3;UBERON:0002095,3.79e-13,3;UBERON:0004782,3.79e-13,3;UBERON:0003281,3.79e-13,3;UBERON:0009664,3.79e-13,3;UBERON:0002296,3.79e-13,3;UBERON:0005602,3.79e-13,3;UBERON:0001179,3.79e-13,3;UBERON:0006293,3.79e-13,3;UBERON:0002372,2.08e-10,1;UBERON:0001961,2.08e-10,1;UBERON:0001744,2.08e-10,1;UBERON:0001735,2.08e-10,1;UBERON:0001154,2.50e-10,1;UBERON:0001153,2.50e-10,1;UBERON:0001045,2.50e-10,1;UBERON:0000029,3.29e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6978768047132,10.4267748601431,8.42205360056368,0,0,0,0,0,0,25.0219057874374,53.0291237178082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0.853460445133014,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,2.21027132424918,0,0,19.3243144573879,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.14994833854341,0,0,0.123563938946503,0,0.134802265961354,0.802577647298789,0,3.46664099509765,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,6.57218385698286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0,1.48849806543585,25.6895121467328,9.37803007532899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8149501796133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,2.07421177600403,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,1.23195368227496,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,1.31577485171795,0,28.2833471267549,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,1.49263787330687,0,0.193766729508018,0,0,0.0636471582781649,0.202117188958219,0.653150243690884,0.684466602170562,4.04112318087525,0.860666464712116,0,0,0,0,0,0,0,0,0,0.402547587182052,11.2198972306132 | |||
|short_description=p5@KCNN3 | |||
}} |
Revision as of 21:10, 10 January 2014
Short description: | p5@KCNN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNN3_5end |
Coexpression cluster: | C1464_Burkitt_myeloma_lymphangiectasia_splenic_b_xeroderma_B |
Association with transcript: | 0bp_to_ENST00000361147_5end |
EntrezGene: | KCNN3 |
HGNC: | 6292 |
UniProt: | Q9UGI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.31e-44 | 24 |
pro-B cell | 1.31e-44 | 24 |
lymphoid lineage restricted progenitor cell | 1.63e-23 | 52 |
lymphocyte | 4.91e-23 | 53 |
common lymphoid progenitor | 4.91e-23 | 53 |
mature B cell | 6.53e-19 | 2 |
pre-B-II cell | 6.53e-19 | 2 |
transitional stage B cell | 6.53e-19 | 2 |
small pre-B-II cell | 6.53e-19 | 2 |
immature B cell | 6.53e-19 | 2 |
precursor B cell | 6.17e-13 | 3 |
B-1 B cell | 2.28e-10 | 1 |
antibody secreting cell | 2.74e-10 | 1 |
plasma cell | 2.74e-10 | 1 |
plasmablast | 2.74e-10 | 1 |
nongranular leukocyte | 1.82e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 5.40e-09 | 120 |
leukocyte | 1.03e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.79e-13 | 3 |
gastrointestinal system mesentery | 3.79e-13 | 3 |
stomach region | 3.79e-13 | 3 |
mesentery | 3.79e-13 | 3 |
gastrointestinal system serosa | 3.79e-13 | 3 |
mesentery of stomach | 3.79e-13 | 3 |
gut mesentery | 3.79e-13 | 3 |
dorsal mesentery | 3.79e-13 | 3 |
dorsal mesogastrium | 3.79e-13 | 3 |
peritoneal cavity | 3.79e-13 | 3 |
spleen primordium | 3.79e-13 | 3 |
tonsil | 2.08e-10 | 1 |
mucosa-associated lymphoid tissue | 2.08e-10 | 1 |
lymphoid tissue | 2.08e-10 | 1 |
tonsillar ring | 2.08e-10 | 1 |
vermiform appendix | 2.50e-10 | 1 |
caecum | 2.50e-10 | 1 |
midgut | 2.50e-10 | 1 |
lymph node | 3.29e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.06e-23 | 10 |
bone marrow cancer | 7.40e-11 | 1 |
myeloma | 7.40e-11 | 1 |
genetic disease | 1.19e-10 | 1 |
monogenic disease | 1.19e-10 | 1 |
xeroderma pigmentosum | 1.19e-10 | 1 |
lymphatic system cancer | 2.28e-10 | 1 |
lymphosarcoma | 2.28e-10 | 1 |
hematologic cancer | 3.48e-08 | 51 |
immune system cancer | 3.48e-08 | 51 |