FFCP PHASE1:Hg19::chr1:154178803..154178823,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32305 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VU69 | |||
|association_with_transcript=0bp_to_ENST00000368525,NM_001010979,uc001fee.1_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_C1orf189_5end | |||
|id=chr1:154178803..154178823,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.54e-15;10!UBERON:0005564;1.54e-15;10!UBERON:0008947;2.33e-14;29!UBERON:0007297;1.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-20!115;UBERON:0001896!1.04e-15!3;UBERON:0005290!1.04e-15!3;UBERON:0010096!1.04e-15!3;UBERON:0002298!1.67e-15!8;UBERON:0003127!3.53e-12!2;UBERON:0000341!6.40e-12!2;UBERON:0003076!1.43e-11!15;UBERON:0003057!1.43e-11!15;UBERON:0002148!6.10e-11!2;UBERON:0009662!6.10e-11!2;UBERON:0004733!2.86e-10!12;UBERON:0002028!2.86e-10!12;UBERON:0007277!2.86e-10!12;UBERON:0001049!3.82e-10!57;UBERON:0005068!3.82e-10!57;UBERON:0006241!3.82e-10!57;UBERON:0007135!3.82e-10!57;UBERON:0004732!1.84e-09!13;UBERON:0002308!3.20e-09!9;UBERON:0000125!3.20e-09!9;UBERON:0002616!4.45e-08!59;UBERON:0000988!1.41e-07!3;UBERON:0006331!1.41e-07!3;UBERON:0001017!1.56e-07!82;UBERON:0003075!3.44e-07!86;UBERON:0007284!3.44e-07!86;UBERON:0005743!4.43e-07!86;UBERON:0001301!6.59e-07!1;UBERON:0002346!9.14e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.06e-34;2!UBERON:0000341;9.92e-34;2!UBERON:0001301;4.44e-18;1!UBERON:0002171;1.57e-17;1!UBERON:0006518;1.57e-17;1!UBERON:0008949;1.57e-17;1!UBERON:0000101;1.57e-17;1!UBERON:0002167;1.57e-17;1!UBERON:0003135;2.46e-14;11!UBERON:0000974;6.00e-12;6!UBERON:0003126;1.61e-10;7!UBERON:0001005;1.61e-10;7!UBERON:0005178;7.52e-10;34!UBERON:0002224;7.52e-10;34!UBERON:0000473;2.45e-09;8!UBERON:0005181;1.57e-08;35!UBERON:0000991;1.03e-07;21!UBERON:0003101;1.85e-07;22!UBERON:0000079;1.85e-07;22!UBERON:0000065;1.87e-07;44!UBERON:0002048;2.29e-07;22!UBERON:0000117;2.29e-07;22!UBERON:0000171;2.29e-07;22!UBERON:0000170;2.29e-07;22!UBERON:0006947;6.88e-07;3!UBERON:0004054;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.18e-34,2;UBERON:0000341,1.39e-33,2;UBERON:0001301,4.44e-18,1;UBERON:0002171,1.70e-17,1;UBERON:0006518,1.70e-17,1;UBERON:0008949,1.70e-17,1;UBERON:0000101,1.70e-17,1;UBERON:0002167,1.70e-17,1;UBERON:0003135,2.46e-14,11;UBERON:0005178,2.76e-12,34;UBERON:0002224,2.76e-12,34;UBERON:0005181,6.18e-12,35;UBERON:0008947,5.37e-11,38;UBERON:0003258,5.37e-11,38;UBERON:0003126,1.46e-10,7;UBERON:0001005,1.46e-10,7;UBERON:0000473,2.45e-09,8;UBERON:0007023,1.01e-08,114;UBERON:0000915,4.88e-08,52;UBERON:0000065,9.70e-08,54;UBERON:0000991,1.02e-07,21;UBERON:0009196,1.02e-07,21;UBERON:0009117,1.02e-07,21;UBERON:0005564,1.02e-07,21;UBERON:0000974,1.67e-07,10;UBERON:0003101,1.85e-07,22;UBERON:0000079,1.85e-07,22;UBERON:0004176,2.16e-07,22;UBERON:0002048,2.26e-07,22;UBERON:0000117,2.26e-07,22;UBERON:0000171,2.26e-07,22;UBERON:0000170,2.26e-07,22;UBERON:0005597,2.26e-07,22;UBERON:0000118,2.26e-07,22;UBERON:0006947,6.88e-07,3;UBERON:0004054,6.88e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,2.75056058545197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.996239941255349,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29016005671309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,2.99004755189545,9.11784969578063,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80504788038217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,4.31938579843965,7.23503151421682,0,0,2.55880778281177,2.85677317756488,0,0,0,0,0,0,0,0.0673520530145875,18.2174401697398,2.99394320891412,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@C1orf189 | |||
}} |
Revision as of 21:07, 10 January 2014
Short description: | p1@C1orf189 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf189_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000368525, NM_001010979, uc001fee.1_5end |
EntrezGene: | C1orf189 |
HGNC: | 32305 |
UniProt: | Q5VU69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.18e-34 | 2 |
throat | 1.39e-33 | 2 |
epididymis | 4.44e-18 | 1 |
lower lobe of right lung | 1.70e-17 | 1 |
right lung lobe | 1.70e-17 | 1 |
lower lobe of lung | 1.70e-17 | 1 |
lobe of lung | 1.70e-17 | 1 |
right lung | 1.70e-17 | 1 |
male reproductive organ | 2.46e-14 | 11 |
thoracic cavity element | 2.76e-12 | 34 |
thoracic cavity | 2.76e-12 | 34 |
thoracic segment organ | 6.18e-12 | 35 |
respiratory primordium | 5.37e-11 | 38 |
endoderm of foregut | 5.37e-11 | 38 |
trachea | 1.46e-10 | 7 |
respiratory airway | 1.46e-10 | 7 |
testis | 2.45e-09 | 8 |
adult organism | 1.01e-08 | 114 |
thoracic segment of trunk | 4.88e-08 | 52 |
respiratory tract | 9.70e-08 | 54 |
gonad | 1.02e-07 | 21 |
indifferent external genitalia | 1.02e-07 | 21 |
indifferent gonad | 1.02e-07 | 21 |
gonad primordium | 1.02e-07 | 21 |
neck | 1.67e-07 | 10 |
male organism | 1.85e-07 | 22 |
male reproductive system | 1.85e-07 | 22 |
external genitalia | 2.16e-07 | 22 |
lung | 2.26e-07 | 22 |
respiratory tube | 2.26e-07 | 22 |
respiration organ | 2.26e-07 | 22 |
pair of lungs | 2.26e-07 | 22 |
lung primordium | 2.26e-07 | 22 |
lung bud | 2.26e-07 | 22 |
male genital duct | 6.88e-07 | 3 |
internal male genitalia | 6.88e-07 | 3 |