FFCP PHASE1:Hg19::chr1:152842546..152842554,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1250 | |||
|description=CAGE_peak_at_chr1:152842546..152842554,+ | |||
|id=chr1:152842546..152842554,+ | |||
|ontology_enrichment_celltype=CL:0002556!2.97e-17!6;CL:0002582!2.21e-15!3;CL:0002601!1.11e-12!1;CL:0002334!9.51e-09!12;CL:0000057!1.52e-08!75;CL:0002583!8.06e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.00e-40;10!UBERON:0006603;4.47e-07;65 | |||
|ontology_enrichment_disease=DOID:0060084!2.73e-16!3;DOID:127!2.73e-16!3;DOID:0060072!1.86e-12!4;DOID:3112!1.96e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.98e-131;3!DOID:127;8.98e-131;3!DOID:0060072;1.55e-98;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.98e-131,3;DOID:127,8.98e-131,3;DOID:0060072,1.55e-98,4 | |||
|ontology_enrichment_uberon=UBERON:0001758!2.97e-17!6;UBERON:0003672!2.97e-17!6;UBERON:0001882!4.81e-12!1;UBERON:0005403!4.81e-12!1;UBERON:0002046!6.22e-10!5;UBERON:0004117!6.22e-10!5;UBERON:0007689!6.22e-10!5;UBERON:0007123!6.22e-10!5;UBERON:0003091!6.22e-10!5;UBERON:0003129!1.12e-09!11;UBERON:0000075!2.89e-08!13;UBERON:0005944!2.89e-08!13;UBERON:0004288!2.89e-08!13;UBERON:0003089!2.89e-08!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;2.07e-24;17!UBERON:0003975;3.88e-23;18!UBERON:0004175;4.86e-20;21!UBERON:0003134;1.77e-12;33!UBERON:0000474;1.70e-11;37!UBERON:0003133;3.81e-10;44!UBERON:0003100;7.90e-07;41!UBERON:0005156;7.98e-07;59!UBERON:0000990;7.98e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,4.86e-20,21;UBERON:0005795,3.41e-19,22;UBERON:0003975,3.41e-19,22;UBERON:0004175,4.64e-17,25;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,0,16.9825427256893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:152842546..152842554,+ | |||
}} |
Revision as of 20:56, 10 January 2014
Short description: | p@chr1:152842546..152842554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152842546..152842554, + |
Coexpression cluster: | C1250_leiomyoma_Mesenchymal_Olfactory_amygdala_carcinoid_fibrosarcoma_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus | 4.86e-20 | 21 |
embryonic uterus | 3.41e-19 | 22 |
internal female genitalia | 3.41e-19 | 22 |
internal genitalia | 4.64e-17 | 25 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.98e-131 | 3 |
leiomyoma | 8.98e-131 | 3 |
benign neoplasm | 1.55e-98 | 4 |