FFCP PHASE1:Hg19::chr1:145096387..145096477,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10700 | |||
|TSSclassifier=strong | |||
|UniProt=O75396 | |||
|association_with_transcript=0bp_to_NM_004892,uc001eml.1_5end | |||
|coexpression_cluster_id=C3859 | |||
|description=CAGE_peak_1_at_SEC22B_5end | |||
|id=chr1:145096387..145096477,+ | |||
|ontology_enrichment_celltype=CL:0000048!6.55e-27!430;CL:0000723!6.04e-25!436;CL:0000034!7.53e-22!444;CL:0000055!1.48e-20!180;CL:0000680!6.49e-18!57;CL:0000056!6.49e-18!57;CL:0000355!6.49e-18!57;CL:0000187!1.52e-16!54;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0002320!3.41e-14!365;CL:0000134!2.20e-13!358;CL:0000183!2.93e-13!59;CL:0000359!7.13e-13!32;CL:0000057!1.25e-12!75;CL:0000393!7.75e-12!60;CL:0000211!7.75e-12!60;CL:0002371!1.28e-10!591;CL:0000144!3.77e-10!625;CL:0000222!8.36e-10!119;CL:0000219!1.30e-09!390;CL:0000839!7.52e-09!70;CL:0000766!1.12e-08!76;CL:0002194!2.16e-08!63;CL:0000576!2.16e-08!63;CL:0000040!2.16e-08!63;CL:0000559!2.16e-08!63;CL:0002009!1.08e-07!65;CL:0000548!1.59e-07!679;CL:0000004!1.59e-07!679;CL:0000255!1.59e-07!679;CL:0000557!2.65e-07!71;CL:0002057!3.08e-07!42;CL:0000012!3.65e-07!682;CL:0000860!4.20e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.26e-12;33!CL:0002057;2.26e-12;33!CL:0000359;3.90e-12;32!CL:0000473;4.57e-12;39!CL:0000234;4.57e-12;39!CL:0000192;1.07e-10;43!CL:0000187;2.18e-09;55!CL:0000134;8.85e-09;55!CL:0000723;1.09e-07;61!CL:0000048;1.11e-07;58!CL:0000393;8.91e-07;61!CL:0000211;8.91e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.19e-27,427;CL:0000723,3.06e-25,433;CL:0000034,4.05e-22,441;CL:0000680,5.24e-18,58;CL:0000056,5.24e-18,58;CL:0000355,5.24e-18,58;CL:0000187,1.22e-16,55;CL:0000192,1.47e-14,43;CL:0000514,1.47e-14,43;CL:0002320,2.70e-14,361;CL:0000134,1.74e-13,354;CL:0000057,6.42e-13,76;CL:0000359,7.13e-13,32;CL:0000393,5.88e-12,61;CL:0000211,5.88e-12,61;CL:0000219,1.12e-09,386;CL:0000222,1.24e-09,121;CL:0000473,4.40e-09,48;CL:0000234,4.40e-09,48;CL:0000839,1.15e-08,66;CL:0000766,1.77e-08,72;CL:0002194,3.22e-08,59;CL:0000576,3.22e-08,59;CL:0000040,3.22e-08,59;CL:0000559,3.22e-08,59;CL:0002009,1.68e-07,61;CL:0000860,3.08e-07,42;CL:0002057,3.08e-07,42;CL:0000557,4.25e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-10;43!CL:0000355;1.69e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!7.84e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.23e-24!167;UBERON:0000914!3.54e-18!83;UBERON:0002329!3.54e-18!83;UBERON:0003077!3.54e-18!83;UBERON:0003059!3.54e-18!83;UBERON:0007282!3.54e-18!83;UBERON:0009618!3.54e-18!83;UBERON:0007285!3.54e-18!83;UBERON:0004290!9.51e-17!70;UBERON:0001134!2.55e-15!61;UBERON:0002036!2.55e-15!61;UBERON:0003082!2.55e-15!61;UBERON:0002385!9.01e-15!63;UBERON:0001015!9.01e-15!63;UBERON:0000383!9.01e-15!63;UBERON:0002384!6.16e-14!375;UBERON:0000486!1.50e-12!82;UBERON:0005256!4.18e-11!143;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0004765!3.56e-09!101;UBERON:0001434!3.56e-09!101;UBERON:0002371!9.46e-09!80;UBERON:0001637!1.37e-08!42;UBERON:0003509!1.37e-08!42;UBERON:0004572!1.37e-08!42;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0001474!8.53e-08!86;UBERON:0003081!3.55e-07!216;UBERON:0000490!3.95e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.24e-07;33!UBERON:0004571;2.24e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.53e-25,167;UBERON:0007524,6.02e-17,73;UBERON:0002329,7.27e-17,71;UBERON:0003059,7.27e-17,71;UBERON:0007282,7.27e-17,71;UBERON:0004290,7.27e-17,71;UBERON:0009618,7.27e-17,71;UBERON:0000926,9.09e-17,315;UBERON:0004120,9.09e-17,315;UBERON:0006603,9.09e-17,315;UBERON:0003077,1.04e-16,72;UBERON:0007285,1.04e-16,72;UBERON:0001134,1.98e-15,62;UBERON:0002036,1.98e-15,62;UBERON:0003082,1.98e-15,62;UBERON:0002385,6.91e-15,64;UBERON:0001015,6.91e-15,64;UBERON:0000383,6.91e-15,64;UBERON:0002384,4.95e-14,371;UBERON:0007503,5.84e-13,78;UBERON:0000486,1.12e-12,83;UBERON:0005256,9.10e-12,122;UBERON:0001434,9.23e-10,100;UBERON:0004765,6.15e-09,90;UBERON:0001637,1.37e-08,42;UBERON:0003509,1.37e-08,42;UBERON:0004572,1.37e-08,42;UBERON:0003104,1.51e-08,160;UBERON:0009142,1.51e-08,160;UBERON:0002371,1.51e-08,76;UBERON:0000490,1.89e-08,148;UBERON:0004573,2.63e-08,33;UBERON:0004571,2.63e-08,33;UBERON:0003081,3.66e-08,203;UBERON:0001474,1.41e-07,82 | |||
|phase1_expression=254.71308773732,198.685286170832,297.131883834307,208.152460574511,241.805952085163,254.722849037308,129.182937865838,304.488978991733,114.921676407929,115.003482282706,24.423040879035,87.3765488520689,82.0315302290491,247.904004978973,263.129516327965,269.602383727162,266.390981386598,256.338841725968,236.159474614605,123.736663367172,94.0443186636006,57.048759309012,76.7112445511232,82.5352783189492,83.8624832493283,68.3135847386684,74.218932862751,80.8359724091486,65.2984699569181,77.533538415637,47.0641014880871,34.0185853057203,28.6145622839338,56.5723635555185,36.3321170721615,44.3568005360755,63.417694896327,78.1133526029947,71.7949121943107,68.5754351462092,206.67398272345,212.79813857447,224.863470544645,159.356469702403,203.297257704579,184.606470563928,330.049232406072,359.771902019098,382.797074426348,267.841617251922,238.741778485122,305.062076556275,355.77754252019,358.243999389023,379.194162464157,230.408623600148,318.754383267564,415.064275770071,327.203680944495,384.152045410084,406.61841200819,159.648029290371,159.570926097305,161.112955701358,447.792855203905,473.766662617102,604.137581525708,233.912507354028,234.667313289091,283.214253495472,383.217885166922,523.322520738329,577.227394692173,71.6155420597483,48.2611760920649,77.7833574836075,76.7204550730562,71.78455477824,108.650496607226,43.8919625361523,46.5465024645871,61.7404839724463,61.5986855614629,64.9904947401936,80.0558328477199,68.2768356106412,69.2685057572302,63.7975208349476,68.0876218968408,77.2783541173645,44.398611590537,51.0896354752717,48.9309732000293,63.4422377179324,88.5603529510827,61.368491752593,61.9635775858574,51.8774206828897,50.3723672548798,79.7479583013534,73.6584322591914,70.5437230544753,91.5685623517183,95.7015824643641,73.3568709612345,70.4477784775915,92.6149214076353,62.5085640261295,62.6886055238613,81.3967627788197,90.0901057981866,111.86399109373,92.9756751026119,105.678627095437,99.3087476147279,89.2877620456822,69.7461298355497,68.3818616510434,106.521290340211,89.8354468393953,98.3136015323192,80.7884237781118,95.6152006143857,99.3176102558287,104.941810303971,80.9778201990538,82.1127996921047,56.4498881029251,52.4182783735674,52.1367853978076,177.979012409192,277.670155917305,154.074387021454,242.164232097659,208.55657082453,284.188870201136,264.830220368016,180.054902011975,91.0370289289973,116.629663065309,99.8681513330843,77.0811859304039,36.7938241175468,51.1682531042513,100.285144639297,89.5026849718234,94.5331099289131,50.7985029770378,71.499363847516,73.5485852632539,73.9396155404143,131.615893051237,81.2308773761771,75.7512642178173,92.7093754023892,88.8631275466418,80.2540671501353,81.4012791383386,115.979801635868,95.0606540251663,79.7602047876111,104.157278483436,46.3717909341522,77.2092468726324,98.0271756936929,83.5845456738987,64.2154005710846,65.2020471998436,72.0588196089651,78.7890497441547,66.3190313028074,195.035017805374,372.269053582392,42.3011230578258,214.691883132378,183.740872425305,377.101346956047,180.707071071753,151.0887308165,157.550405639988,174.000863039419,135.913819177855,200.10869576205,148.720581964936,103.634846573933,188.13728256265,137.70604595072,105.444644325208,232.559257238589,236.175334119402,281.112968117938,110.74073222107,92.267578289835,93.1188848435907,177.001666477992,107.480027647797,166.251181911807,215.028517168052,266.059215903727,205.696467797994,158.095991199572,102.853365625934,94.214245463589,191.174239684086,160.226831621506,229.865846849265,246.089940489006,110.596378581021,161.809451391353,246.445226696627,282.505224245696,129.339262412377,251.345118812552,200.959621235591,231.529369276498,105.31643131855,186.98161290434,163.82951948443,235.279540929717,311.653597546669,147.328980894395,183.469570872533,183.464560879948,67.061516047664,78.2781366095695,82.8865280674221,32.3230321243428,26.5059536642971,35.2067646894641,43.9522873265171,30.2785021050754,27.7382792897631,287.867139486861,201.977654592566,133.990873711906,368.708134857391,327.011405196322,97.2481896327517,113.626081112641,105.803842118849,99.2645754591546,105.671530384817,100.365471883994,101.258312428283,119.498872261336,113.500411299185,56.0998145514733,98.1692416624121,164.218030521229,101.436010856024,206.610706759584,106.145339401184,137.654048256767,45.9121623391237,83.6321382093172,156.126707371658,68.4841780949824,76.4331922151813,57.7036301642761,53.8864750822642,141.074996199371,85.2746523929254,103.918566258197,95.7585145094135,242.2141362085,87.4860673432107,79.1705226506004,80.2872522430005,99.5657541428687,121.905035017472,188.602226662946,192.117501679314,185.045797049467,79.6737588887604,154.71154007115,116.680905030484,88.1255863396027,65.1020022271275,40.6385639915124,292.64196331019,132.248747887866,94.7489488021328,97.136848603032,81.6788544268678,101.787124550347,80.5995577927966,60.9530725492244,63.2968050284009,87.711851275935,90.7036034688631,119.189622406951,105.515350368984,121.196899135652,90.4994447030523,291.636990749547,7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| |||
|short_description=p1@SEC22B | |||
}} |
Revision as of 20:29, 10 January 2014
Short description: | p1@SEC22B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEC22B_5end |
Coexpression cluster: | C3859_CD14_Fibroblast_Preadipocyte_Smooth_leiomyoma_tenocyte_Myoblast |
Association with transcript: | 0bp_to_NM_004892, uc001eml.1_5end |
EntrezGene: | SEC22B |
HGNC: | 10700 |
UniProt: | O75396 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.19e-27 | 427 |
somatic stem cell | 3.06e-25 | 433 |
stem cell | 4.05e-22 | 441 |
muscle precursor cell | 5.24e-18 | 58 |
myoblast | 5.24e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.24e-18 | 58 |
muscle cell | 1.22e-16 | 55 |
smooth muscle cell | 1.47e-14 | 43 |
smooth muscle myoblast | 1.47e-14 | 43 |
connective tissue cell | 2.70e-14 | 361 |
mesenchymal cell | 1.74e-13 | 354 |
fibroblast | 6.42e-13 | 76 |
vascular associated smooth muscle cell | 7.13e-13 | 32 |
electrically responsive cell | 5.88e-12 | 61 |
electrically active cell | 5.88e-12 | 61 |
motile cell | 1.12e-09 | 386 |
mesodermal cell | 1.24e-09 | 121 |
defensive cell | 4.40e-09 | 48 |
phagocyte | 4.40e-09 | 48 |
myeloid lineage restricted progenitor cell | 1.15e-08 | 66 |
myeloid leukocyte | 1.77e-08 | 72 |
monopoietic cell | 3.22e-08 | 59 |
monocyte | 3.22e-08 | 59 |
monoblast | 3.22e-08 | 59 |
promonocyte | 3.22e-08 | 59 |
macrophage dendritic cell progenitor | 1.68e-07 | 61 |
classical monocyte | 3.08e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-07 | 42 |
granulocyte monocyte progenitor cell | 4.25e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.84e-07 | 14 |