FFCP PHASE1:Hg19::chr1:110993795..110993824,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18454 | |||
|TSSclassifier=strong | |||
|UniProt=P58294 | |||
|association_with_transcript=0bp_to_ENST00000271331_5end | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_2_at_PROK1_5end | |||
|id=chr1:110993795..110993824,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.91e-19!15;CL:0002615!1.50e-15!3;CL:0002541!6.95e-15!3;CL:0002617!7.23e-11!2;CL:0002195!2.29e-10!2;CL:0002571!2.29e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002617;7.95e-27;2!CL:0002615;9.93e-19;3!CL:0000136;1.85e-16;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,6.10e-27,2;CL:0002615,1.14e-18,3;CL:0000136,2.58e-14,15 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.36e-15;1!UBERON:0005754;2.57e-14;1!UBERON:0009117;7.01e-13;10!UBERON:0005564;7.01e-13;10!UBERON:0007297;8.32e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.95e-15!3;UBERON:0000920!6.95e-15!3;UBERON:0007023!1.32e-14!115;UBERON:0003124!3.09e-11!7;UBERON:0004457!1.18e-09!12;UBERON:0000042!1.18e-09!12;UBERON:0002323!1.37e-08!46;UBERON:0003688!5.40e-08!6;UBERON:0002358!5.40e-08!6;UBERON:0003684!5.40e-08!6;UBERON:0001178!5.40e-08!6;UBERON:0004458!5.96e-08!49;UBERON:0003135!2.21e-07!11;UBERON:0006947!2.32e-07!3;UBERON:0004054!2.32e-07!3;UBERON:0003886!4.63e-07!63;UBERON:0002106!9.30e-07!3;UBERON:0004854!9.30e-07!3;UBERON:0009034!9.30e-07!3;UBERON:0002095!9.30e-07!3;UBERON:0004782!9.30e-07!3;UBERON:0003281!9.30e-07!3;UBERON:0009664!9.30e-07!3;UBERON:0002296!9.30e-07!3;UBERON:0005602!9.30e-07!3;UBERON:0001179!9.30e-07!3;UBERON:0006293!9.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.07e-15;8!UBERON:0001882;1.50e-14;1!UBERON:0005403;1.50e-14;1!UBERON:0000998;2.57e-14;1!UBERON:0006868;2.57e-14;1!UBERON:0003135;1.39e-11;11!UBERON:0000991;1.55e-10;21!UBERON:0003688;7.59e-10;6!UBERON:0002358;7.59e-10;6!UBERON:0003684;7.59e-10;6!UBERON:0001178;7.59e-10;6!UBERON:0002323;1.22e-07;45!UBERON:0004457;7.53e-07;9!UBERON:0000042;7.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.16e-15,8;UBERON:0001882,1.41e-14,1;UBERON:0005403,1.41e-14,1;UBERON:0000998,3.15e-14,1;UBERON:0006868,3.15e-14,1;UBERON:0003135,1.47e-11,11;UBERON:0000991,1.61e-10,21;UBERON:0009196,1.61e-10,21;UBERON:0009117,1.61e-10,21;UBERON:0005564,1.61e-10,21;UBERON:0002323,3.52e-10,46;UBERON:0004176,4.72e-10,22;UBERON:0003688,8.11e-10,6;UBERON:0002358,8.11e-10,6;UBERON:0003684,8.11e-10,6;UBERON:0001178,8.11e-10,6;UBERON:0003133,1.03e-09,48;UBERON:0004458,1.55e-09,49;UBERON:0003124,1.22e-08,7;UBERON:0003886,1.27e-08,54;UBERON:0005156,7.71e-08,59;UBERON:0000990,7.71e-08,59;UBERON:0002553,1.36e-07,61 | |||
|phase1_expression=1.99846217197612,1.71280419112787,0.845726424575827,2.00146596706261,6.70441641640932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,2.17048642156577,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61595542857974,0,0,0,0,7.01802551410223,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31225210347254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.9337106830044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96733272910777,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,2.67355278346688,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.084143192641,14.4700630284336,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@PROK1 | |||
}} |
Revision as of 20:04, 10 January 2014
Short description: | p2@PROK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PROK1_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | 0bp_to_ENST00000271331_5end |
EntrezGene: | PROK1 |
HGNC: | 18454 |
UniProt: | P58294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 6.10e-27 | 2 |
adipocyte of omentum tissue | 1.14e-18 | 3 |
fat cell | 2.58e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
testis | 1.16e-15 | 8 |
nucleus accumbens | 1.41e-14 | 1 |
ventral striatum | 1.41e-14 | 1 |
seminal vesicle | 3.15e-14 | 1 |
seminal fluid secreting gland | 3.15e-14 | 1 |
male reproductive organ | 1.47e-11 | 11 |
gonad | 1.61e-10 | 21 |
indifferent external genitalia | 1.61e-10 | 21 |
indifferent gonad | 1.61e-10 | 21 |
gonad primordium | 1.61e-10 | 21 |
body cavity | 3.52e-10 | 46 |
external genitalia | 4.72e-10 | 22 |
omentum | 8.11e-10 | 6 |
peritoneum | 8.11e-10 | 6 |
abdominal cavity | 8.11e-10 | 6 |
visceral peritoneum | 8.11e-10 | 6 |
reproductive organ | 1.03e-09 | 48 |
body cavity or lining | 1.55e-09 | 49 |
chorion | 1.22e-08 | 7 |
body cavity precursor | 1.27e-08 | 54 |
reproductive structure | 7.71e-08 | 59 |
reproductive system | 7.71e-08 | 59 |
anatomical cavity | 1.36e-07 | 61 |