FFCP PHASE1:Hg19::chr1:110607538..110607549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:110607538..110607549,- | |||
|id=chr1:110607538..110607549,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002575;3.06e-12;2!CL:0002590;1.35e-08;3!CL:0000669;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.59e-12,2;CL:0002590,1.51e-08,3;CL:0000669,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.34e-23;1 | |||
|ontology_enrichment_disease=DOID:171!8.51e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:9119;1.34e-23;1!DOID:3193;1.48e-12;2!DOID:962;1.48e-12;2!DOID:1192;8.31e-09;3!DOID:8692;5.75e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.34e-23,1;DOID:3193,1.48e-12,2;DOID:962,1.48e-12,2;DOID:1192,8.31e-09,3;DOID:8692,4.30e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.48e-25!41;UBERON:0001890!3.48e-25!41;UBERON:0006240!3.48e-25!41;UBERON:0002791!4.25e-25!33;UBERON:0003080!1.70e-24!42;UBERON:0001893!2.86e-24!34;UBERON:0002020!2.91e-24!34;UBERON:0003528!2.91e-24!34;UBERON:0000073!4.76e-24!94;UBERON:0001016!4.76e-24!94;UBERON:0005743!6.24e-23!86;UBERON:0002616!6.90e-23!59;UBERON:0001017!2.99e-22!82;UBERON:0002346!3.82e-22!90;UBERON:0002619!1.58e-21!22;UBERON:0001049!2.35e-21!57;UBERON:0005068!2.35e-21!57;UBERON:0006241!2.35e-21!57;UBERON:0007135!2.35e-21!57;UBERON:0000955!1.51e-20!69;UBERON:0006238!1.51e-20!69;UBERON:0001869!8.28e-20!32;UBERON:0001950!9.11e-20!20;UBERON:0007023!3.70e-19!115;UBERON:0000956!9.75e-19!25;UBERON:0000203!9.75e-19!25;UBERON:0003056!1.23e-17!61;UBERON:0003075!1.49e-17!86;UBERON:0007284!1.49e-17!86;UBERON:0000200!7.98e-16!6;UBERON:0000924!1.09e-14!173;UBERON:0006601!1.09e-14!173;UBERON:0000153!3.65e-13!129;UBERON:0007811!3.65e-13!129;UBERON:0002771!3.50e-12!3;UBERON:0001871!3.72e-12!7;UBERON:0000033!1.09e-11!123;UBERON:0004121!1.12e-11!169;UBERON:0002420!6.91e-11!9;UBERON:0007245!6.91e-11!9;UBERON:0010009!6.91e-11!9;UBERON:0010011!6.91e-11!9;UBERON:0000454!6.91e-11!9;UBERON:0001876!3.57e-09!2;UBERON:0002360!4.91e-09!2;UBERON:0000094!4.91e-09!2;UBERON:0007645!4.91e-09!2;UBERON:0000349!5.63e-08!5;UBERON:0002021!3.22e-07!5;UBERON:0002308!5.73e-07!9;UBERON:0000125!5.73e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.34e-23;1!UBERON:0003714;1.48e-12;2!UBERON:0002360;2.19e-12;2!UBERON:0000094;2.19e-12;2!UBERON:0010743;2.19e-12;2!UBERON:0001954;3.06e-12;2!UBERON:0003022;3.06e-12;2!UBERON:0002421;3.06e-12;2!UBERON:0002600;3.06e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.10e-23,1;UBERON:0007645,2.10e-23,1;UBERON:0007647,2.10e-23,1;UBERON:0010115,2.10e-23,1;UBERON:0003714,1.48e-12,2;UBERON:0002360,2.07e-12,2;UBERON:0000094,2.07e-12,2;UBERON:0010743,2.07e-12,2;UBERON:0001954,2.90e-12,2;UBERON:0003022,2.90e-12,2;UBERON:0002421,2.90e-12,2;UBERON:0002600,2.90e-12,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0,0,1.76221041716467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,2.51058146936511,0,10.0253790836027,0,0,0,0,0,0,0,0,0,0,0,0,11.3244469119259,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,2.78020950365347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0.509197589862076,0.637724760305049,0.991486114072017,15.0834127852776,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p@chr1:110607538..110607549,- | |||
}} |
Revision as of 20:03, 10 January 2014
Short description: | p@chr1:110607538..110607549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110607538..110607549, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.59e-12 | 2 |
smooth muscle cell of the brain vasculature | 1.51e-08 | 3 |
pericyte cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.10e-23 | 1 |
future meninx | 2.10e-23 | 1 |
ectomeninx | 2.10e-23 | 1 |
future dura mater | 2.10e-23 | 1 |
neural tissue | 1.48e-12 | 2 |
meninx | 2.07e-12 | 2 |
membrane organ | 2.07e-12 | 2 |
meningeal cluster | 2.07e-12 | 2 |
Ammon's horn | 2.90e-12 | 2 |
lobe parts of cerebral cortex | 2.90e-12 | 2 |
hippocampal formation | 2.90e-12 | 2 |
limbic lobe | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.34e-23 | 1 |
peripheral nerve sheath neoplasm | 1.48e-12 | 2 |
neurofibroma | 1.48e-12 | 2 |
peripheral nervous system neoplasm | 8.31e-09 | 3 |
myeloid leukemia | 4.30e-07 | 31 |