FFCP PHASE1:Hg19::chr1:94521047..94521059,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr1:94521047..94521059,- | |||
|id=chr1:94521047..94521059,- | |||
|ontology_enrichment_celltype=CL:0000062!7.07e-07!11;CL:0000375!7.07e-07!11;CL:0000335!7.07e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.78e-23;6!CL:0002255;6.78e-23;6!CL:0000322;2.59e-12;3!CL:0002076;1.11e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.43e-23,6;CL:0002255,5.43e-23,6;CL:0000322,2.31e-12,3;CL:0002076,7.76e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!2.60e-09!1;DOID:4549!2.60e-09!1;DOID:5861!2.60e-09!1;DOID:6496!2.60e-09!1;DOID:3908!2.88e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.78e-23;6!DOID:3910;9.07e-18;2!DOID:3908;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.43e-23,6;DOID:3910,7.67e-18,2;DOID:3908,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001301!3.31e-09!1;UBERON:0002146!4.91e-09!1;UBERON:0005623!4.91e-09!1;UBERON:0002581!6.72e-09!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0003135!5.53e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.07e-18;2!UBERON:0002173;9.07e-18;2!UBERON:0002186;9.07e-18;2!UBERON:0004821;2.59e-12;3!UBERON:0007499;2.59e-12;3!UBERON:0003215;2.59e-12;3!UBERON:0010368;2.59e-12;3!UBERON:0009911;2.59e-12;3!UBERON:0002299;2.59e-12;3!UBERON:0006524;2.59e-12;3!UBERON:0008874;2.59e-12;3!UBERON:0002169;2.59e-12;3!UBERON:0004894;2.59e-12;3!UBERON:0009856;1.44e-09;4!UBERON:0000995;9.25e-09;17!UBERON:0003975;2.51e-08;18!UBERON:0004175;2.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.67e-18,2;UBERON:0002173,7.67e-18,2;UBERON:0002186,7.67e-18,2;UBERON:0004821,2.31e-12,3;UBERON:0003215,2.31e-12,3;UBERON:0010368,2.31e-12,3;UBERON:0009911,2.31e-12,3;UBERON:0002299,2.31e-12,3;UBERON:0006524,2.31e-12,3;UBERON:0008874,2.31e-12,3;UBERON:0002169,2.31e-12,3;UBERON:0004894,2.31e-12,3;UBERON:0000995,2.69e-07,21;UBERON:0005795,5.24e-07,22;UBERON:0003975,5.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3906760159992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.34945333648406,0,0,0,0,0,0.617792886840502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19349733269765,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60374807980835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.36757959813938,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:94521047..94521059,- | |||
}} |
Revision as of 19:38, 10 January 2014
Short description: | p@chr1:94521047..94521059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94521047..94521059, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.43e-23 | 6 |
stromal cell of endometrium | 5.43e-23 | 6 |
pneumocyte | 2.31e-12 | 3 |
endo-epithelial cell | 7.76e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.67e-18 | 2 |
alveolar duct | 7.67e-18 | 2 |
bronchiole | 7.67e-18 | 2 |
pulmonary alveolus epithelium | 2.31e-12 | 3 |
alveolus | 2.31e-12 | 3 |
pulmonary lobule | 2.31e-12 | 3 |
lobule | 2.31e-12 | 3 |
alveolus of lung | 2.31e-12 | 3 |
alveolar system | 2.31e-12 | 3 |
pulmonary acinus | 2.31e-12 | 3 |
alveolar sac | 2.31e-12 | 3 |
alveolar wall | 2.31e-12 | 3 |
uterus | 2.69e-07 | 21 |
embryonic uterus | 5.24e-07 | 22 |
internal female genitalia | 5.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.43e-23 | 6 |
lung adenocarcinoma | 7.67e-18 | 2 |
non-small cell lung carcinoma | 6.13e-08 | 5 |