FFCP PHASE1:Hg19::chr1:87380299..87380475,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5193 | |||
|TSSclassifier=strong | |||
|UniProt=Q7LGA3 | |||
|association_with_transcript=0bp_to_ENST00000370550,ENST00000370551,NM_001134492,NM_012262,uc001dmc.3,uc010osk.1_5end | |||
|description=CAGE_peak_1_at_HS2ST1_5end | |||
|id=chr1:87380299..87380475,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!6.72e-10!41;UBERON:0001890!6.72e-10!41;UBERON:0006240!6.72e-10!41;UBERON:0000025!2.80e-09!194;UBERON:0003080!3.49e-09!42;UBERON:0000477!5.37e-09!286;UBERON:0000483!1.39e-08!309;UBERON:0001017!1.48e-08!82;UBERON:0000955!2.46e-08!69;UBERON:0006238!2.46e-08!69;UBERON:0001869!2.98e-08!32;UBERON:0000119!3.51e-08!312;UBERON:0001893!5.01e-08!34;UBERON:0002020!5.51e-08!34;UBERON:0003528!5.51e-08!34;UBERON:0001049!8.54e-08!57;UBERON:0005068!8.54e-08!57;UBERON:0006241!8.54e-08!57;UBERON:0007135!8.54e-08!57;UBERON:0005743!8.96e-08!86;UBERON:0002791!9.39e-08!33;UBERON:0004111!1.00e-07!241;UBERON:0000481!1.70e-07!347;UBERON:0002616!2.15e-07!59;UBERON:0000073!2.23e-07!94;UBERON:0001016!2.23e-07!94;UBERON:0003056!7.67e-07!61;UBERON:0003075!8.36e-07!86;UBERON:0007284!8.36e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.84e-08;32!UBERON:0002791;1.21e-07;32!UBERON:0002780;1.60e-07;41!UBERON:0001890;1.60e-07;41!UBERON:0003528;1.91e-07;34!UBERON:0002020;1.91e-07;34!UBERON:0001893;2.50e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.72e-10,41;UBERON:0001890,6.72e-10,41;UBERON:0003080,6.72e-10,41;UBERON:0006240,6.72e-10,41;UBERON:0000025,2.80e-09,192;UBERON:0001017,5.21e-09,81;UBERON:0000955,7.93e-09,68;UBERON:0006238,7.93e-09,68;UBERON:0011216,1.13e-08,223;UBERON:0001016,1.73e-08,89;UBERON:0001049,2.53e-08,56;UBERON:0005068,2.53e-08,56;UBERON:0006241,2.53e-08,56;UBERON:0007135,2.53e-08,56;UBERON:0000073,2.85e-08,53;UBERON:0002616,2.85e-08,53;UBERON:0001869,2.97e-08,32;UBERON:0010314,4.12e-08,132;UBERON:0001893,5.01e-08,34;UBERON:0000483,5.27e-08,306;UBERON:0003528,5.51e-08,34;UBERON:0002020,5.51e-08,34;UBERON:0002791,6.53e-08,32;UBERON:0000119,1.28e-07,309;UBERON:0004111,1.29e-07,240;UBERON:0003056,9.14e-07,61 | |||
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| |||
|short_description=p1@HS2ST1 | |||
}} |
Revision as of 19:24, 10 January 2014
Short description: | p1@HS2ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HS2ST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370550, ENST00000370551, NM_001134492, NM_012262, uc001dmc.3, uc010osk.1_5end |
EntrezGene: | HS2ST1 |
HGNC: | 5193 |
UniProt: | Q7LGA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 6.72e-10 | 41 |
forebrain | 6.72e-10 | 41 |
anterior neural tube | 6.72e-10 | 41 |
future forebrain | 6.72e-10 | 41 |
tube | 2.80e-09 | 192 |
central nervous system | 5.21e-09 | 81 |
brain | 7.93e-09 | 68 |
future brain | 7.93e-09 | 68 |
organ system subdivision | 1.13e-08 | 223 |
nervous system | 1.73e-08 | 89 |
neural tube | 2.53e-08 | 56 |
neural rod | 2.53e-08 | 56 |
future spinal cord | 2.53e-08 | 56 |
neural keel | 2.53e-08 | 56 |
regional part of nervous system | 2.85e-08 | 53 |
regional part of brain | 2.85e-08 | 53 |
cerebral hemisphere | 2.97e-08 | 32 |
structure with developmental contribution from neural crest | 4.12e-08 | 132 |
telencephalon | 5.01e-08 | 34 |
epithelium | 5.27e-08 | 306 |
brain grey matter | 5.51e-08 | 34 |
gray matter | 5.51e-08 | 34 |
regional part of telencephalon | 6.53e-08 | 32 |
cell layer | 1.28e-07 | 309 |
anatomical conduit | 1.29e-07 | 240 |
pre-chordal neural plate | 9.14e-07 | 61 |