FFCP PHASE1:Hg19::chr1:65886317..65886320,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54741,3953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29477,6554 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001dcf.2,uc001dcg.2,uc001dch.2,uc001dci.2,uc009wao.2,uc009wap.2,uc009waq.2_5end | |||
|description=CAGE_peak_4_at_LEPROT_5end,CAGE_peak_9_at_LEPR_5end | |||
|id=chr1:65886317..65886320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,6.80e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.49e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;5.60e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.57e-08,3;UBERON:0002084,6.08e-07,1;UBERON:0002082,6.08e-07,1;UBERON:0010226,6.08e-07,1;UBERON:0002079,8.97e-07,1;UBERON:0000941,9.48e-07,1;UBERON:0001785,9.48e-07,1;UBERON:0002464,9.48e-07,1;UBERON:0004904,9.48e-07,1;UBERON:0001021,9.48e-07,1;UBERON:0003902,9.48e-07,1;UBERON:0005425,9.48e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,2.00146596706261,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0.737201809504527,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0,0.502170558379211,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.767658796194425,0.77408061658038,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0.587200878669695,0,0,0.434021741431704,0.447830948479849,0,0.257575567634187,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0.236482229888585,1.03423704220986,0,0,0.376484679085209,0.818718450173537,0.224723484445085,1.53041946185451,0.962787081228281,0,0,0.398927315243264,0.426224750532694,2.03146467040009,0.56738522469114,0,0.75374599577023,0.521482918420201,0.217188844705117,1.21079900526674,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.32145117339416,0.285012743741249,0.39783335439818,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.790152254325231,0,0.393010762749165,0.205601498999509,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0.886135578334485,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.296573126324121,0,0,0,0,1.03088233644789,0,0.637130828648193,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0.403213486449465,0,0.289648807765598,0,0,0.639312809217652,0.361439152384566,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0,0.196468613246569,0.364295288292542,0.370784442784429,0.97364218096405,0.174129737299267,0.398873881556595,0.953962497221368,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,0,0.71153252537342,1.00416183829401,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.17859945656816,0.673588117878509,0.337834441449967,0,0,0.366403487860815,0,0,0,1.49091585508596,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,1.0776853765575,0.817309515567294,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0.469737994575059,0.647491777472526,0.140450806702248,0.204154171254893,0.368502951935304,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0,1.22595118319608,0.751190294532984,0.340296549480063,0.538168907066586,0,0.635795703478686,0.300091096084402,0.206105058476878,0,0.744467425326359,0.337552664482532,0.292311015483596,0,0.460249493211497,0.484938170456436,0.710019185033229,1.30977727695932,0,0.57978255948989,0.545492241181669,0,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.330881918197182,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,2.53510069643662,0,0,0,0.245976877086227,0.514703430895577,0.109750285408626,1.1240175325762,0,0.277765335475589,0.325808305310325,0,0,0.115930404975077,0.821860859650752,0.144366447761074,0.462985512576611,0.380508304469197,0,0.858486162094873,0.738651018262192,0.702012795417713,0.594524649154913,0.93733833986777,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.176096868026452,0.414656231081544,0.576479813667846,0.37872730027914,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0.672786506072164,0.87192013766656,0.4400297149257,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,2.29723871668228,0,0.144781306667579,0,0.537182889719687,0.112085143993527,0,0,0.513372145118994,0,0,0,0.167516265334349,1.27587750330633,1.49801404789436,0,0.828831026872071,0.36807447515742,0.500170521059677,0,0.415941723061614,0.356857977594324,1.10391690523754,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0.606255142892519,0,0.907170879989041,0,0.153461973288062,0,0.512556597022804,0.511707249066704,0.482561763430822,0,0,0.177561725313127,0.164254312027618,0,0.464841513839837,0,0.601519410909855,0.184161977871793,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0.422206515571503,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0.657779629937804,2.0914836081992,0.256450125116389,0.328014645699706,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.462145851343933,0.307007349452259,0.413509717453592,0.214840489736547,0,0.511359764496605,0.0890320356467374,0.495854746082934,0.192190067365106,0.127612712494584,0.30347334256665,0.464845549297286,0.62962469366128,0,0.3080335801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| |||
|short_description=p4@LEPROT,p9@LEPR | |||
}} |
Revision as of 18:54, 10 January 2014
Short description: | p4@LEPROT, p9@LEPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LEPROT_5end, CAGE_peak_9_at_LEPR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001dcf.2, uc001dcg.2, uc001dch.2, uc001dci.2, uc009wao.2, uc009wap.2, uc009waq.2_5end |
EntrezGene: | 54741,3953 |
HGNC: | 6554&submit=Submit 29477, 6554 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 6.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.57e-08 | 3 |
heart left ventricle | 6.08e-07 | 1 |
cardiac ventricle | 6.08e-07 | 1 |
future cardiac ventricle | 6.08e-07 | 1 |
left cardiac atrium | 8.97e-07 | 1 |
cranial nerve II | 9.48e-07 | 1 |
cranial nerve | 9.48e-07 | 1 |
nerve trunk | 9.48e-07 | 1 |
nerve connecting eye with brain | 9.48e-07 | 1 |
nerve | 9.48e-07 | 1 |
retinal neural layer | 9.48e-07 | 1 |
presumptive neural retina | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.49e-07 | 1 |