FFCP PHASE1:Hg19::chr1:61547811..61547837,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4774 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7784 | |||
|TSSclassifier=strong | |||
|UniProt=Q12857 | |||
|association_with_transcript=-142bp_to_ENST00000403491,NM_001134673,NM_005595,uc001czv.2,uc001czw.2_5end | |||
|description=CAGE_peak_7_at_NFIA_5end | |||
|id=chr1:61547811..61547837,+ | |||
|ontology_enrichment_celltype=CL:0000223!7.35e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.31e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.08e-14!286;UBERON:0000468!1.13e-14!659;UBERON:0007023!1.31e-14!115;UBERON:0000481!1.59e-14!347;UBERON:0000119!3.98e-14!312;UBERON:0002050!1.27e-13!605;UBERON:0005423!1.27e-13!605;UBERON:0000467!1.54e-13!625;UBERON:0004111!2.70e-13!241;UBERON:0000480!2.75e-13!626;UBERON:0000483!2.92e-13!309;UBERON:0000923!3.10e-13!604;UBERON:0005291!3.10e-13!604;UBERON:0006598!3.10e-13!604;UBERON:0002532!3.10e-13!604;UBERON:0000475!3.81e-13!365;UBERON:0000922!8.14e-13!612;UBERON:0004119!9.01e-12!169;UBERON:0000925!9.01e-12!169;UBERON:0006595!9.01e-12!169;UBERON:0001007!1.50e-10!155;UBERON:0001555!1.50e-10!155;UBERON:0007026!1.50e-10!155;UBERON:0004921!2.12e-08!129;UBERON:0004185!2.12e-08!129;UBERON:0000025!2.56e-08!194;UBERON:0000062!4.03e-08!511;UBERON:0000153!5.62e-08!129;UBERON:0007811!5.62e-08!129;UBERON:0000033!8.76e-08!123;UBERON:0000924!2.17e-07!173;UBERON:0006601!2.17e-07!173;UBERON:0004121!3.80e-07!169;UBERON:0002365!4.21e-07!31;UBERON:0002330!4.21e-07!31;UBERON:0001048!5.04e-07!168;UBERON:0002346!7.17e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.03e-08;31!UBERON:0002330;2.03e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.20e-12,114;UBERON:0004111,3.37e-10,240;UBERON:0002050,1.46e-09,564;UBERON:0004119,1.66e-09,160;UBERON:0000925,1.66e-09,160;UBERON:0006595,1.66e-09,160;UBERON:0005423,4.36e-09,581;UBERON:0000923,4.66e-09,560;UBERON:0010316,4.66e-09,560;UBERON:0005291,4.66e-09,560;UBERON:0006598,4.66e-09,560;UBERON:0010317,4.66e-09,560;UBERON:0002532,4.66e-09,560;UBERON:0000922,7.12e-09,592;UBERON:0002365,8.01e-09,31;UBERON:0002330,8.01e-09,31;UBERON:0011216,3.67e-08,223;UBERON:0001007,4.74e-08,145;UBERON:0001555,4.74e-08,145;UBERON:0007026,4.74e-08,145;UBERON:0000119,1.54e-07,309;UBERON:0004921,2.53e-07,118;UBERON:0000025,5.27e-07,192;UBERON:0000483,9.27e-07,306 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0.986680828671798,0,1.34088328328186,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0.218441372130172,0,0.990130823680373,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0.369363174230364,0.204000691244253,0.313454721478088,1.43117993565528,0,1.50651167513763,0,0,0,0,0,0.309632246632152,0.919421224478927,0.90361775633475,1.84877005083394,0.697204805222715,0.568676929949686,0.587200878669695,0,0.200544447470142,0,3.35873211359887,1.29557466407592,4.89393578504954,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0.80642697289893,0,0.289648807765598,4.87613732627923,1.34140171940727,1.02290049474824,0.361439152384566,1.00267582127178,0.869079113764942,0,0.486634870302636,0.756278537312543,1.10864698731282,1.14185221401064,1.57174890597255,0.728590576585084,1.11235332835329,0,0,0,0,0,0,1.19257444420023,0,2.42998351125316,1.13061588384802,1.25849830862972,2.20094433552054,0.835979866147242,1.8089173141853,0.71153252537342,0.66944122552934,0,1.52054421143703,0.732186172644509,0,0.81014194788176,1.87529429396568,3.81699933464489,2.81528701208306,1.53316637465883,0.949265659568129,0.549605231791222,0,0,1.74437620857014,0,1.01304409331664,0,1.14734648299525,1.77334191099179,1.12135520028461,0,0.24666754841716,2.17847724779836,1.61652806483626,0.980771418680752,1.36221684880438,3.45705554687999,0.468642863667593,0.624320153660641,1.1409436430889,0.747243402759005,0.587172493218824,0.647491777472526,0.280901613404497,0.816616685019573,0.859840221182376,1.23990937410919,1.18800285728205,0,0.910161361938026,0.718618141816238,0.673344455816265,0.500474079487857,0.554128230968366,0.438977620880838,0,0.300476117813194,0.907457465280168,0.538168907066586,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0,1.00973509697646,0.0920498986422993,0.969876340912871,0.355009592516614,0.201504196455281,0.508681776931463,0.57978255948989,2.45471508531751,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0,0.55146986366197,1.30727666455444,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0.738155454624648,0,2.057870056657,1.47008711385542,1.26755034821831,2.94848165003288,4.72631925345123,0.441463099414651,0.368965315629341,0.514703430895577,0.658501712451753,0,0.402115889646523,1.11106134190236,0.977424915930974,1.03993478527958,0,0.231860809950154,0.70445216541493,0.433099343283221,0.925971025153221,0.951270761172991,0,0,0.738651018262192,0,0.594524649154913,1.87467667973554,0.16798212819886,0.425325291727159,0.358234090811393,1.74380363108377,1.15014803749563,0,0.088048434013226,0.414656231081544,0.288239906833923,0.75745460055828,0.317489471460845,0.381988425558278,0,0,0,0,0.285826432630578,1.45770409648969,2.61576041299968,1.7601188597028,0,3.57656445851882,0,0.26593811658487,0,0.771622122786426,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0.977208552881205,1.06617584622764,0,0,0,0.799783929456456,0,0.502257091432126,0,0,2.29723871668228,0,0.868687840005475,1.64381058040307,0.537182889719687,0,0,0,0,2.7950408664471,1.30139853857622,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,2.33113834266366,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.347534457872331,0.391602314925481,0.686286847621712,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.767309866440312,0.561320188866147,0.896974044789907,0.511707249066704,0.804269605718038,1.48418066444991,0.771048469013278,0.710246901252508,0.574890092096664,1.55776328755086,0.116210378459959,0.241718899183244,0.40101294060657,2.85451065701279,0.34444334449382,0,0.524497659837696,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,1.02056223165909,1.72732732881711,3.08454505380579,0.270946437543853,0,0.764628819135115,0,0,0.877039506583738,0.522870902049801,0.256450125116389,0,0.650756789328606,4.6368455241475,0.27470839445503,0.577566499444116,2.29706215198469,0.650060246036521,0,0.096670718292122,1.84858340537573,1.07452572308291,0.137836572484531,2.36324538710202,1.59518363305651,0.852266274161009,0.445160178233687,4.29740779938543,4.99694175149276,11.357531412018,4.55210013849975,0,0.31481234683064,0.6970372701606,0,1.06461206063404,0,0.18532421910392,0.429374660225974,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0.318203247925937,0.78494864019923,1.07923474549989,1.37268514868027,0.471249609382746,0.404364963146632,0,0.842516912477962,0.48763373908959,0.243713489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| |||
|short_description=p7@NFIA | |||
}} |
Revision as of 18:45, 10 January 2014
Short description: | p7@NFIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NFIA_5end |
Coexpression cluster: | NA |
Association with transcript: | -142bp_to_ENST00000403491, NM_001134673, NM_005595, uc001czv.2, uc001czw.2_5end |
EntrezGene: | NFIA |
HGNC: | 7784 |
UniProt: | Q12857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.31e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.20e-12 | 114 |
anatomical conduit | 3.37e-10 | 240 |
embryonic structure | 1.46e-09 | 564 |
endoderm-derived structure | 1.66e-09 | 160 |
endoderm | 1.66e-09 | 160 |
presumptive endoderm | 1.66e-09 | 160 |
developing anatomical structure | 4.36e-09 | 581 |
germ layer | 4.66e-09 | 560 |
germ layer / neural crest | 4.66e-09 | 560 |
embryonic tissue | 4.66e-09 | 560 |
presumptive structure | 4.66e-09 | 560 |
germ layer / neural crest derived structure | 4.66e-09 | 560 |
epiblast (generic) | 4.66e-09 | 560 |
embryo | 7.12e-09 | 592 |
exocrine gland | 8.01e-09 | 31 |
exocrine system | 8.01e-09 | 31 |
organ system subdivision | 3.67e-08 | 223 |
digestive system | 4.74e-08 | 145 |
digestive tract | 4.74e-08 | 145 |
primitive gut | 4.74e-08 | 145 |
cell layer | 1.54e-07 | 309 |
subdivision of digestive tract | 2.53e-07 | 118 |
tube | 5.27e-07 | 192 |
epithelium | 9.27e-07 | 306 |