FFCP PHASE1:Hg19::chr1:60139305..60139321,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55277 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25610 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000472783_5end | |||
|description=CAGE_peak_13_at_FGGY_5end | |||
|id=chr1:60139305..60139321,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.54e-16!42;CL:0000860!5.79e-15!45;CL:0002194!2.98e-12!63;CL:0000576!2.98e-12!63;CL:0000040!2.98e-12!63;CL:0000559!2.98e-12!63;CL:0002009!9.55e-12!65;CL:0000839!1.31e-10!70;CL:0000557!2.11e-10!71;CL:0000766!1.91e-09!76;CL:0002097!3.85e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.40e-29;2!CL:0000174;7.86e-20;3!CL:0000860;1.82e-13;33!CL:0002057;1.82e-13;33!CL:0000473;1.41e-12;39!CL:0000234;1.41e-12;39!CL:0000077;2.68e-07;19!CL:0000150;3.14e-07;9!CL:0000163;3.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.96e-29,2;CL:0000174,7.16e-20,3;CL:0000473,6.12e-14,48;CL:0000234,6.12e-14,48;CL:0000860,6.55e-12,42;CL:0002057,6.55e-12,42;CL:0002194,4.70e-11,59;CL:0000576,4.70e-11,59;CL:0000040,4.70e-11,59;CL:0000559,4.70e-11,59;CL:0002009,1.11e-10,61;CL:0000839,7.59e-10,66;CL:0000557,1.08e-09,67;CL:0000766,5.41e-09,72;CL:0000077,2.48e-07,19;CL:0000150,3.04e-07,9;CL:0000163,3.04e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;5.55e-16;1!DOID:170;2.09e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.56e-16,1;DOID:170,1.99e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.69e-10!14;UBERON:0000158!1.69e-10!14;UBERON:0001474!5.55e-09!86;UBERON:0002371!9.05e-09!80;UBERON:0004765!6.67e-08!101;UBERON:0001434!6.67e-08!101;UBERON:0003124!1.00e-07!7;UBERON:0002390!7.41e-07!102;UBERON:0003061!7.41e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;7.86e-20;3!UBERON:0001235;7.86e-20;3!UBERON:0006858;7.86e-20;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.16e-20,3;UBERON:0001235,7.16e-20,3;UBERON:0006858,7.16e-20,3;UBERON:0002371,1.69e-08,76;UBERON:0001474,7.63e-08,82;UBERON:0004765,4.19e-07,90;UBERON:0002405,7.36e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,1.83650335422542,0.320929027076094,1.27867425159808,0,0,0,1.16083695451434,0.56738522469114,0.622822248995575,0.251248665256743,0,0.217188844705117,1.81619850790011,1.47311054395026,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08647371922008,0.957003479195758,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01281278773745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92619830407303,1.07220795687463,0,0,0,1.71315693154527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0.80682027481408,0,0.523813388962845,7.36973628795435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p13@FGGY | |||
}} |
Revision as of 18:44, 10 January 2014
Short description: | p13@FGGY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FGGY_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000472783_5end |
EntrezGene: | FGGY |
HGNC: | 25610 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.96e-29 | 2 |
steroid hormone secreting cell | 7.16e-20 | 3 |
defensive cell | 6.12e-14 | 48 |
phagocyte | 6.12e-14 | 48 |
classical monocyte | 6.55e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-12 | 42 |
monopoietic cell | 4.70e-11 | 59 |
monocyte | 4.70e-11 | 59 |
monoblast | 4.70e-11 | 59 |
promonocyte | 4.70e-11 | 59 |
macrophage dendritic cell progenitor | 1.11e-10 | 61 |
myeloid lineage restricted progenitor cell | 7.59e-10 | 66 |
granulocyte monocyte progenitor cell | 1.08e-09 | 67 |
myeloid leukocyte | 5.41e-09 | 72 |
mesothelial cell | 2.48e-07 | 19 |
glandular epithelial cell | 3.04e-07 | 9 |
endocrine cell | 3.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 7.16e-20 | 3 |
adrenal cortex | 7.16e-20 | 3 |
adrenal/interrenal gland | 7.16e-20 | 3 |
bone marrow | 1.69e-08 | 76 |
bone element | 7.63e-08 | 82 |
skeletal element | 4.19e-07 | 90 |
immune system | 7.36e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.56e-16 | 1 |
endocrine gland cancer | 1.99e-10 | 6 |