FFCP PHASE1:Hg19::chr1:44497118..44497176,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |||
|TSSclassifier=strong | |||
|UniProt=E9PLM5,B7Z9G8,P48067 | |||
|association_with_transcript=0bp_to_ENST00000466926,ENST00000492434,ENST00000537678,NM_001024845,uc001cln.2,uc010okm.1,uc010oko.1,uc010okp.1_5end | |||
|description=CAGE_peak_1_at_SLC6A9_5end | |||
|id=chr1:44497118..44497176,- | |||
|ontology_enrichment_celltype=CL:0000057!1.90e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.35e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.08e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.00e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.75e-14!365;UBERON:0000468!5.44e-12!659;UBERON:0000481!8.04e-12!347;UBERON:0004119!4.46e-11!169;UBERON:0000925!4.46e-11!169;UBERON:0006595!4.46e-11!169;UBERON:0001007!3.60e-10!155;UBERON:0001555!3.60e-10!155;UBERON:0007026!3.60e-10!155;UBERON:0007023!1.78e-09!115;UBERON:0001048!2.45e-08!168;UBERON:0000924!2.47e-08!173;UBERON:0006601!2.47e-08!173;UBERON:0003102!3.24e-08!95;UBERON:0000477!8.03e-08!286;UBERON:0000077!1.11e-07!130;UBERON:0000033!1.16e-07!123;UBERON:0004921!1.52e-07!129;UBERON:0004185!1.52e-07!129;UBERON:0004121!2.58e-07!169;UBERON:0000153!6.12e-07!129;UBERON:0007811!6.12e-07!129;UBERON:0000467!6.35e-07!625;UBERON:0000062!6.50e-07!511;UBERON:0000480!6.64e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.82e-11,160;UBERON:0000925,6.82e-11,160;UBERON:0006595,6.82e-11,160;UBERON:0001007,3.94e-10,145;UBERON:0001555,3.94e-10,145;UBERON:0007026,3.94e-10,145;UBERON:0011216,2.50e-09,223;UBERON:0007023,8.05e-09,114;UBERON:0001048,2.11e-07,160;UBERON:0004921,3.02e-07,118;UBERON:0001004,5.33e-07,74;UBERON:0003102,6.77e-07,99 | |||
|phase1_expression=6.17706489519893,5.1384125733836,12.5449419645414,6.00439790118782,8.04529969969118,3.48935409640147,5.06599756336621,2.52687949370732,1.82829939739887,1.47440361900905,2.09340350391728,1.52908960491121,0.791300934685361,2.97039247104112,1.65698687863958,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,2.09305798730539,2.44800829493104,11.9112794161673,3.43483184557268,3.01123735160345,3.26410862946487,0,0,0,0,0,0.464448369948228,2.75826367343678,4.819294700452,15.8994224371719,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,4.69490601792545,7.28816602508123,7.95166135246046,16.5441510509844,15.9331170856906,4.7717156823066,10.2193322763554,0.850813354476611,0.886917589850256,1.14185221401064,3.73290365168481,14.5718115317017,9.26961106961073,0.324547393654683,0,0,0,0,0.371457501329565,0.993812036833525,0.860234595106124,0,1.13061588384802,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,7.84969293856562,13.9152146474689,7.09130865321647,1.98613771219828,14.0549944166919,8.15737279056221,13.4562624034154,17.0798393167528,11.8400423240237,3.7345324247972,8.08264032418128,2.28846664358842,6.05429710579726,2.88087962239999,21.7918931605431,0.936480230490962,0.570471821544449,1.64393548606981,1.52664848236894,1.61872944368132,0.561803226808994,1.22492502752936,2.57952066354713,15.2922156140133,11.8800285728205,12.1160795346493,7.28129089550421,22.9957805381196,1.34668891163253,1.87677779807946,0.831192346452549,4.38977620880838,6.74273150757843,8.71380741658261,4.19699077692078,7.71375433462106,10.8914268297469,5.93409323246773,15.0045548042201,7.21367704669072,13.912589162464,13.5865305122061,15.3586462339552,7.69752340773469,7.06814567883521,10.5857383438644,7.27407255684654,13.1353549231147,5.44061330429257,4.57813599238317,4.25173876959253,1.90922284413584,2.86804595389004,0.975789649036763,1.45782745153634,1.04574548582567,1.96956004529204,0.252320850875628,1.09493207722749,0,4.5026865673502,5.52539685409922,0.928735856063958,0,11.357452803825,11.4637589253109,9.3994301654558,10.6985153550422,10.4582133164355,9.01628352622167,10.9213359609733,8.43752300038988,12.3119090222845,0,0,0.4115740113314,1.47008711385542,1.26755034821831,31.450470933684,1.18157981336281,0,2.09080345523293,0.686271241194102,4.60951198716227,20.2323155863715,6.03173834469785,2.77765335475589,14.009757128344,2.07986957055916,4.3299402607582,2.43453850447661,4.10930429825376,0,0,0,5.53143078571493,9.4433477830436,0,0,0,0.93733833986777,2.85569617938061,1.55952606966625,9.40364488379907,7.26584846284905,5.75074018747817,0,0,0.207328115540772,0.720599767084807,0.37872730027914,0,4.58386110669933,0,5.13217338068116,1.13110241973656,2.40274446275134,2.85826432630578,1.79409734952577,5.66748089483264,0.22001485746285,7.36848779819333,14.3062578340753,1.690605505112,11.4353390131494,5.2003718455683,1.28603687131071,0,0.799266537048298,7.14889968290738,9.22456729165453,0.823240336780769,0.65147236858747,2.13235169245527,3.95975936466715,2.41151501647669,4.35766729300147,0.699810938274399,0,0,0,11.2623682081044,16.0806710167759,2.85273810081437,2.31650090668127,1.02738161275192,0.179060963239896,0.224170287987055,0,0,0.128343036279748,7.11464947822898,1.30139853857622,0.773288812777695,1.17261385734044,0,0,0,0,1.47229790062968,1.00034104211935,7.05289061619313,14.3499894456257,17.1291829245275,19.23969463414,17.1026465889361,6.62081419400982,20.4666753650386,17.5904221197258,5.31380478828349,7.37476674166813,3.90976265106373,9.00685324328607,7.20601190002797,0,0,0,1.81876542867756,13.3148351608398,9.07170879989041,10.6686357362074,11.6631099698927,15.9976253826852,11.6606625822688,6.14048698880044,7.39928037260594,7.42090332224955,1.07946785661859,2.66342587969691,0.574890092096664,1.03850885836724,0.232420756919918,1.20859449591622,0.802025881213139,16.4824970195254,14.9258782613989,8.5582848963157,7.47409165268718,1.35359883872224,0.770153371044148,3.13739907670742,0,0.211103257785751,0,0,0.215915916102139,0,1.62567862526312,1.50506932156456,1.52925763827023,9.97291210714469,0.223874754722178,74.5483580596178,84.7050861320678,0.256450125116389,0,4.55529752530024,4.01859945426117,0.366277859273374,0.082509499920588,6.3169209179579,7.80072295243825,17.6752322828576,10.6337790121334,0.154048617114644,0.614014698904518,0.689182862422653,3.00776685631166,1.45016693914229,0.681813019328807,9.34836374290742,13.3880781442392,14.0298749176527,0.893288987462089,14.9713515666214,1.85938219718914,10.0739950985805,0,5.85263802334569,2.66153015158511,0.869932992075073,1.4825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| |||
|short_description=p1@SLC6A9 | |||
}} |
Revision as of 18:15, 10 January 2014
Short description: | p1@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000466926, ENST00000492434, ENST00000537678, NM_001024845, uc001cln.2, uc010okm.1, uc010oko.1, uc010okp.1_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | E9PLM5B7Z9G8P48067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.35e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.82e-11 | 160 |
endoderm | 6.82e-11 | 160 |
presumptive endoderm | 6.82e-11 | 160 |
digestive system | 3.94e-10 | 145 |
digestive tract | 3.94e-10 | 145 |
primitive gut | 3.94e-10 | 145 |
organ system subdivision | 2.50e-09 | 223 |
adult organism | 8.05e-09 | 114 |
primordium | 2.11e-07 | 160 |
subdivision of digestive tract | 3.02e-07 | 118 |
respiratory system | 5.33e-07 | 74 |
surface structure | 6.77e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.00e-08 | 143 |