FFCP PHASE1:Hg19::chr1:35333189..35333201,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_at_chr1:35333189..35333201,- | |||
|id=chr1:35333189..35333201,- | |||
|ontology_enrichment_celltype=CL:0002057!8.85e-49!42;CL:0000860!1.76e-44!45;CL:0000763!2.63e-40!112;CL:0000049!2.63e-40!112;CL:0002194!9.28e-38!63;CL:0000576!9.28e-38!63;CL:0000040!9.28e-38!63;CL:0000559!9.28e-38!63;CL:0002009!1.09e-37!65;CL:0000766!1.90e-35!76;CL:0000557!4.97e-35!71;CL:0000839!2.37e-32!70;CL:0000037!9.06e-26!172;CL:0000566!9.06e-26!172;CL:0002032!1.09e-23!165;CL:0000837!1.09e-23!165;CL:0000988!4.71e-23!182;CL:0002087!7.45e-19!119;CL:0000738!5.87e-18!140;CL:0002031!2.13e-15!124;CL:0002393!6.07e-07!9;CL:0002397!6.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.64e-87;33!CL:0002057;3.64e-87;33!CL:0000473;1.17e-61;39!CL:0000234;1.17e-61;39!CL:0000576;6.76e-50;48!CL:0000766;4.70e-30;69!CL:0000763;2.42e-22;100!CL:0000767;2.41e-11;3!CL:0002087;7.56e-11;104!CL:0000738;6.75e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-89,42;CL:0002057,1.01e-89,42;CL:0000473,2.32e-77,48;CL:0000234,2.32e-77,48;CL:0002194,4.64e-60,59;CL:0000576,4.64e-60,59;CL:0000040,4.64e-60,59;CL:0000559,4.64e-60,59;CL:0002009,7.92e-58,61;CL:0000766,1.28e-57,72;CL:0000763,1.92e-55,108;CL:0000049,1.92e-55,108;CL:0000557,2.06e-55,67;CL:0000839,7.86e-53,66;CL:0002032,1.08e-33,161;CL:0000837,1.08e-33,161;CL:0000037,1.38e-33,168;CL:0000988,2.53e-31,177;CL:0002087,1.46e-28,115;CL:0000738,6.57e-28,136;CL:0002031,3.15e-25,120;CL:0000767,2.42e-11,3;CL:0000134,6.25e-11,354;CL:0002320,1.66e-10,361;CL:0000219,5.08e-09,386;CL:0000034,8.34e-08,441;CL:0000048,3.22e-07,427;CL:0000723,5.68e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.12e-66;42!CL:0000049;8.67e-18;108 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.14e-35!102;UBERON:0003061!9.14e-35!102;UBERON:0002193!2.47e-31!112;UBERON:0002371!1.15e-30!80;UBERON:0001474!2.40e-27!86;UBERON:0007023!4.52e-26!115;UBERON:0002405!3.51e-25!115;UBERON:0004765!8.16e-22!101;UBERON:0001434!8.16e-22!101;UBERON:0003081!3.39e-13!216;UBERON:0001049!4.25e-10!57;UBERON:0005068!4.25e-10!57;UBERON:0006241!4.25e-10!57;UBERON:0007135!4.25e-10!57;UBERON:0002204!7.32e-09!167;UBERON:0002616!8.10e-08!59;UBERON:0000062!1.91e-07!511;UBERON:0002780!2.42e-07!41;UBERON:0001890!2.42e-07!41;UBERON:0006240!2.42e-07!41;UBERON:0003075!4.47e-07!86;UBERON:0007284!4.47e-07!86;UBERON:0003080!4.74e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.59e-48,76;UBERON:0002405,1.73e-45,93;UBERON:0002390,6.24e-45,98;UBERON:0003061,6.24e-45,98;UBERON:0001474,1.03e-43,82;UBERON:0002193,2.31e-42,108;UBERON:0004765,4.69e-39,90;UBERON:0001434,2.84e-34,100;UBERON:0003081,7.51e-18,203;UBERON:0002204,5.50e-17,167;UBERON:0002384,6.25e-10,371;UBERON:0000926,8.35e-09,315;UBERON:0004120,8.35e-09,315;UBERON:0006603,8.35e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,2.68680578668049,3.56077083626975,0,0,0,0,0,0.587200878669695,2.21598163412751,0.802177789880567,1.73608696572681,0.223915474239924,0.32389366601898,0,2.18097358169347,3.40088349319928,1.4555043671269,2.78914844286822,3.28934310417461,1.85823822537062,2.8769239232215,1.5369642391746,0.47296445977717,5.17118521104928,4.51839278508678,1.35426486594342,6.02375486536335,2.18324920046277,2.47195832889593,3.36692281607993,6.73950956859797,1.27867425159808,1.31940520074686,1.19678194572979,1.27867425159808,1.45104619314292,1.70215567407342,1.86846674698672,1.7587406567972,1.5644487552606,1.95469960234605,1.81619850790011,3.68277635987565,1.26584954976354,0.845021145247767,0.850417199860174,1.04829322754188,3.25753030324836,3.30389164251314,2.08943262706204,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.94142780736755,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,2.48956981172077,1.2700414963433,28.5667307441609,1.68478306868075,0,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0.166849141711909,0.781552381608161,0,0,1.08182271390393,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,13.1863415371821,0.997270091400938,0,0,0,0,0.953619473882272,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0.802577647298789,0.702793337176017,0,0,0,0,1.20990716048664,0.30607276163049,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,3.83239764200917,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0,0.121499113316049,0,1.02447419488958,0.419636705079985,0,0,0,0,0.662091970365432,0,0,0,0,0,11.9855080294035,0,0,1.46552233678082,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.320362237703084,0.157204305099666,0,4.96166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.455324382702595,0.709618961301111,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,2.73947616152849,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.392616934229891,0,0.8453114551668,0,6.01497075071063,4.96325737396544,0,0,0,0,0,0,0.860037498908708,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0.829169439458779,0.413731983447581,0.426467963801962,0,0.129177819672012,0.558672428662721,0,0.190941474834495,0.404234377916439,0.217716747896961,0,0,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,1.81146414231924,0 | |||
|short_description=p@chr1:35333189..35333201,- | |||
}} |
Revision as of 17:45, 10 January 2014
Short description: | p@chr1:35333189..35333201, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:35333189..35333201, - |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-89 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-89 | 42 |
defensive cell | 2.32e-77 | 48 |
phagocyte | 2.32e-77 | 48 |
monopoietic cell | 4.64e-60 | 59 |
monocyte | 4.64e-60 | 59 |
monoblast | 4.64e-60 | 59 |
promonocyte | 4.64e-60 | 59 |
macrophage dendritic cell progenitor | 7.92e-58 | 61 |
myeloid leukocyte | 1.28e-57 | 72 |
myeloid cell | 1.92e-55 | 108 |
common myeloid progenitor | 1.92e-55 | 108 |
granulocyte monocyte progenitor cell | 2.06e-55 | 67 |
myeloid lineage restricted progenitor cell | 7.86e-53 | 66 |
hematopoietic oligopotent progenitor cell | 1.08e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-33 | 161 |
hematopoietic stem cell | 1.38e-33 | 168 |
hematopoietic cell | 2.53e-31 | 177 |
nongranular leukocyte | 1.46e-28 | 115 |
leukocyte | 6.57e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.15e-25 | 120 |
basophil | 2.42e-11 | 3 |
mesenchymal cell | 6.25e-11 | 354 |
connective tissue cell | 1.66e-10 | 361 |
motile cell | 5.08e-09 | 386 |
stem cell | 8.34e-08 | 441 |
multi fate stem cell | 3.22e-07 | 427 |
somatic stem cell | 5.68e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.59e-48 | 76 |
immune system | 1.73e-45 | 93 |
hematopoietic system | 6.24e-45 | 98 |
blood island | 6.24e-45 | 98 |
bone element | 1.03e-43 | 82 |
hemolymphoid system | 2.31e-42 | 108 |
skeletal element | 4.69e-39 | 90 |
skeletal system | 2.84e-34 | 100 |
lateral plate mesoderm | 7.51e-18 | 203 |
musculoskeletal system | 5.50e-17 | 167 |
connective tissue | 6.25e-10 | 371 |
mesoderm | 8.35e-09 | 315 |
mesoderm-derived structure | 8.35e-09 | 315 |
presumptive mesoderm | 8.35e-09 | 315 |