FFCP PHASE1:Hg19::chr1:31882992..31883005,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23231 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z567,F5GZP5,Q96IM8,Q96SA4 | |||
|association_with_transcript=-15bp_to_NM_001199037_5end | |||
|coexpression_cluster_id=C3968 | |||
|description=CAGE_peak_14_at_SERINC2_5end | |||
|id=chr1:31882992..31883005,+ | |||
|ontology_enrichment_celltype=CL:0002556!7.75e-18!6;CL:0000057!9.46e-18!75;CL:0002552!9.38e-16!5;CL:0000055!3.42e-14!180;CL:0002334!5.48e-11!12;CL:0002622!4.80e-10!3;CL:0002504!1.01e-09!3;CL:1000279!1.01e-09!3;CL:1000280!1.01e-09!3;CL:0000048!4.30e-08!430;CL:0000723!8.29e-08!436;CL:0000188!8.96e-08!9;CL:0000034!1.93e-07!444;CL:0002371!5.93e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002556;5.21e-22;6!CL:0002581;1.15e-15;1!CL:0002552;2.00e-12;5!CL:0002561;2.57e-08;2!CL:0002575;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,6.23e-22,6;CL:0002581,8.63e-16,1;CL:0002552,2.25e-12,5;CL:0000057,1.05e-08,76;CL:0002561,2.31e-08,2;CL:0002575,3.08e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!7.75e-18!6;UBERON:0003672!7.75e-18!6;UBERON:0003102!1.21e-11!95;UBERON:0000165!5.97e-11!28;UBERON:0000930!5.97e-11!28;UBERON:0000914!4.96e-10!83;UBERON:0002329!4.96e-10!83;UBERON:0003077!4.96e-10!83;UBERON:0003059!4.96e-10!83;UBERON:0007282!4.96e-10!83;UBERON:0009618!4.96e-10!83;UBERON:0007285!4.96e-10!83;UBERON:0001828!1.10e-09!8;UBERON:0003129!2.22e-09!11;UBERON:0000075!8.10e-08!13;UBERON:0005944!8.10e-08!13;UBERON:0004288!8.10e-08!13;UBERON:0003089!8.10e-08!13;UBERON:0001444!1.08e-07!48;UBERON:0005406!1.65e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;5.21e-22;6!UBERON:0003672;5.21e-22;6!UBERON:0003129;5.74e-19;7!UBERON:0000165;9.15e-13;28!UBERON:0011137;2.63e-12;11!UBERON:0010323;2.63e-12;11!UBERON:0000075;1.23e-08;16!UBERON:0005406;1.73e-08;2!UBERON:0005933;2.57e-08;2!UBERON:0005942;2.57e-08;2!UBERON:0005932;2.57e-08;2!UBERON:0001828;4.19e-08;8!UBERON:0001444;4.43e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,6.23e-22,6;UBERON:0003672,6.23e-22,6;UBERON:0003129,6.70e-19,7;UBERON:0000165,2.81e-12,29;UBERON:0000930,2.81e-12,29;UBERON:0010323,2.90e-12,11;UBERON:0011137,9.24e-10,14;UBERON:0000075,1.31e-08,16;UBERON:0005406,1.50e-08,2;UBERON:0003102,1.74e-08,99;UBERON:0005933,2.31e-08,2;UBERON:0005942,2.31e-08,2;UBERON:0005932,2.31e-08,2;UBERON:0001828,4.50e-08,8;UBERON:0001444,3.00e-07,49 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0.446961094427288,0.872338524100369,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,2.04154171254893,0.737005903870608,0.413303124703062,2.37600571456411,0.494533858557114,0,0,0.336672227908132,0.125118519871964,4.71008996323111,2.19488810440419,1.22595118319608,0.300476117813194,0,0,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.768834895534206,0,0,2.96836132889982,0.154209693802656,0,0,2.59627214591811,0.116210378459959,0,0,0,0.459257792658427,1.82091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0.435050081742686,0.0852266274161009,3.02708921198907,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,1.2591072030832,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p14@SERINC2 | |||
}} |
Revision as of 17:32, 10 January 2014
Short description: | p14@SERINC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SERINC2_5end |
Coexpression cluster: | C3968_Fibroblast_Adipocyte_Hair_Pericytes_Preadipocyte_Skeletal_Prostate |
Association with transcript: | -15bp_to_NM_001199037_5end |
EntrezGene: | SERINC2 |
HGNC: | 23231 |
UniProt: | B7Z567F5GZP5Q96IM8Q96SA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 6.23e-22 | 6 |
perirenal preadipocyte | 8.63e-16 | 1 |
fibroblast of gingiva | 2.25e-12 | 5 |
fibroblast | 1.05e-08 | 76 |
outer root sheath cell | 2.31e-08 | 2 |
central nervous system pericyte | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
periodontium | 6.23e-22 | 6 |
dentition | 6.23e-22 | 6 |
skull | 6.70e-19 | 7 |
mouth | 2.81e-12 | 29 |
stomodeum | 2.81e-12 | 29 |
cranial skeletal system | 2.90e-12 | 11 |
axial skeletal system | 9.24e-10 | 14 |
subdivision of skeletal system | 1.31e-08 | 16 |
perirenal fat | 1.50e-08 | 2 |
surface structure | 1.74e-08 | 99 |
hair root sheath | 2.31e-08 | 2 |
hair outer root sheath | 2.31e-08 | 2 |
bulb of hair follicle | 2.31e-08 | 2 |
gingiva | 4.50e-08 | 8 |
subdivision of head | 3.00e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.15e-08 | 2 |